RNA–Protein interactions for RNA: ENST00000426059.1

FN1-208, Transcript of fibronectin 1, humanhuman

TSL 1 (best) BASIC

Gene FN1, Length 2,388 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FN1-208ENST00000426059 ERVK-7P63135 1459 aa24.22■■□□□ 1.47
FN1-208ENST00000426059 POLR1AO95602 1720 aaPredicted RBP24.22■■□□□ 1.47
FN1-208ENST00000426059 SENP3Q9H4L4 574 aaPredicted RBP24.21■■□□□ 1.47
FN1-208ENST00000426059 SLC52A1Q9NWF4 448 aa24.21■■□□□ 1.47
FN1-208ENST00000426059 MYO5BQ9ULV0 1848 aa24.21■■□□□ 1.47
FN1-208ENST00000426059 YTHDC1Q96MU7 727 aaKnown RBP24.2■■□□□ 1.46
FN1-208ENST00000426059 MYOM2P54296 1465 aa24.2■■□□□ 1.46
FN1-208ENST00000426059 PPLO60437 1756 aa24.2■■□□□ 1.46
FN1-208ENST00000426059 LAMC1P11047 1609 aa24.18■■□□□ 1.46
FN1-208ENST00000426059 ZMYM3Q14202 1370 aa24.18■■□□□ 1.46
FN1-208ENST00000426059 ANP32CO43423 234 aa24.14■■□□□ 1.45
FN1-208ENST00000426059 TMEM131LA2VDJ0 1609 aa24.14■■□□□ 1.45
FN1-208ENST00000426059 NRXN1Q9ULB1 1477 aa24.13■■□□□ 1.45
FN1-208ENST00000426059 NEXMIFQ5QGS0 1516 aa24.12■■□□□ 1.45
FN1-208ENST00000426059 RPGRIP1LQ68CZ1 1315 aa24.12■■□□□ 1.45
FN1-208ENST00000426059 STAG3Q9UJ98 1225 aa24.12■■□□□ 1.45
FN1-208ENST00000426059 SPATA31D1Q6ZQQ2 1576 aa24.12■■□□□ 1.45
FN1-208ENST00000426059 TESK2Q96S53 571 aa24.11■■□□□ 1.45
FN1-208ENST00000426059 IQGAP1P46940 1657 aa24.11■■□□□ 1.45
FN1-208ENST00000426059 KIAA1210Q9ULL0 1709 aa24.11■■□□□ 1.45
FN1-208ENST00000426059 PLPPR3Q6T4P5 718 aa24.1■■□□□ 1.45
FN1-208ENST00000426059 PIK3C2GO75747 1445 aa24.09■■□□□ 1.45
FN1-208ENST00000426059 CEBPAP49715 358 aaPredicted RBP24.09■■□□□ 1.45
FN1-208ENST00000426059 SCAF11Q99590 1463 aaKnown RBP24.08■■□□□ 1.45
FN1-208ENST00000426059 VGFO15240 615 aaPredicted RBP24.08■■□□□ 1.44
FN1-208ENST00000426059 TMEM132EQ6IEE7 984 aa24.07■■□□□ 1.44
FN1-208ENST00000426059 DISP3Q9P2K9 1392 aa24.06■■□□□ 1.44
FN1-208ENST00000426059 CNGB1Q14028 1251 aaPredicted RBP24.05■■□□□ 1.44
FN1-208ENST00000426059 C14orf93Q9H972 538 aaKnown RBP24.05■■□□□ 1.44
FN1-208ENST00000426059 A2ML1A8K2U0 1454 aa24.01■■□□□ 1.43
FN1-208ENST00000426059 TRAK1Q9UPV9 953 aa24.01■■□□□ 1.43
FN1-208ENST00000426059 TMF1P82094 1093 aa24■■□□□ 1.43
FN1-208ENST00000426059 TNRQ92752 1358 aa23.99■■□□□ 1.43
FN1-208ENST00000426059 FER1L4A9Z1Z3 1794 aa23.99■■□□□ 1.43
FN1-208ENST00000426059 ADGRB1O14514 1584 aa23.98■■□□□ 1.43
FN1-208ENST00000426059 EIF3AQ14152 1382 aaKnown RBP23.97■■□□□ 1.43
FN1-208ENST00000426059 SETBP1Q9Y6X0 1596 aa23.97■■□□□ 1.43
FN1-208ENST00000426059 C3P01024 1663 aa23.95■■□□□ 1.43
FN1-208ENST00000426059 ZFYVE9O95405 1425 aa23.95■■□□□ 1.43
FN1-208ENST00000426059 PRKRIP1Q9H875 184 aaPredicted RBP23.93■■□□□ 1.42
FN1-208ENST00000426059 RIMS2Q9UQ26 1411 aa23.93■■□□□ 1.42
FN1-208ENST00000426059 CCER2I3L3R5 266 aa23.92■■□□□ 1.42
FN1-208ENST00000426059 STK26Q9P289 416 aa23.91■■□□□ 1.42
FN1-208ENST00000426059 CENPJQ9HC77 1338 aaPredicted RBP23.89■■□□□ 1.41
FN1-208ENST00000426059 ASXL1Q8IXJ9 1541 aa23.88■■□□□ 1.41
FN1-208ENST00000426059 CCDC184Q52MB2 194 aa23.88■■□□□ 1.41
FN1-208ENST00000426059 UBR1Q8IWV7 1749 aa23.87■■□□□ 1.41
FN1-208ENST00000426059 ALKQ9UM73 1620 aa23.86■■□□□ 1.41
FN1-208ENST00000426059 SAFB2Q14151 953 aaKnown RBP eCLIP23.86■■□□□ 1.41
FN1-208ENST00000426059 CENPBP07199 599 aaPredicted RBP23.85■■□□□ 1.41
FN1-208ENST00000426059 PANK3Q9H999 370 aa23.85■■□□□ 1.41
FN1-208ENST00000426059 MYO3AQ8NEV4 1616 aa23.85■■□□□ 1.41
FN1-208ENST00000426059 RIMS1Q86UR5 1692 aaKnown RBP23.84■■□□□ 1.41
FN1-208ENST00000426059 QRICH2Q9H0J4 1663 aa23.84■■□□□ 1.41
FN1-208ENST00000426059 ARHGEF28Q8N1W1 1705 aaKnown RBP23.83■■□□□ 1.4
FN1-208ENST00000426059 TMEM2Q9UHN6 1383 aa23.81■■□□□ 1.4
FN1-208ENST00000426059 PER1O15534 1290 aaPredicted RBP23.8■■□□□ 1.4
FN1-208ENST00000426059 CDCA8Q53HL2 280 aa23.8■■□□□ 1.4
FN1-208ENST00000426059 PTPRMP28827 1452 aa23.8■■□□□ 1.4
FN1-208ENST00000426059 NLRP1Q9C000 1473 aa23.8■■□□□ 1.4
FN1-208ENST00000426059 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.8■■□□□ 1.4
FN1-208ENST00000426059 BCANQ96GW7 911 aa23.8■■□□□ 1.4
FN1-208ENST00000426059 KDM5AP29375 1690 aaKnown RBP23.79■■□□□ 1.4
FN1-208ENST00000426059 YTHDC2Q9H6S0 1430 aaKnown RBP23.79■■□□□ 1.4
FN1-208ENST00000426059 LTKP29376 864 aa23.78■■□□□ 1.4
FN1-208ENST00000426059 NRXN3Q9Y4C0 1643 aa23.77■■□□□ 1.4
FN1-208ENST00000426059 SBNO2Q9Y2G9 1366 aa23.77■■□□□ 1.4
FN1-208ENST00000426059 MYOM1P52179 1685 aa23.77■■□□□ 1.4
FN1-208ENST00000426059 PRAM1Q96QH2 718 aa23.76■■□□□ 1.39
FN1-208ENST00000426059 SETD1AO15047 1707 aaKnown RBP23.75■■□□□ 1.39
FN1-208ENST00000426059 HDGFP51858 240 aaKnown RBP23.75■■□□□ 1.39
FN1-208ENST00000426059 MRS2Q9HD23 443 aa23.74■■□□□ 1.39
FN1-208ENST00000426059 CC2D1BQ5T0F9 858 aaKnown RBP23.74■■□□□ 1.39
FN1-208ENST00000426059 ADAMTSL3P82987 1691 aa23.74■■□□□ 1.39
FN1-208ENST00000426059 TXNDC2Q86VQ3 553 aa23.73■■□□□ 1.39
FN1-208ENST00000426059 METP08581 1390 aa23.73■■□□□ 1.39
FN1-208ENST00000426059 SLC24A1O60721 1099 aa23.73■■□□□ 1.39
FN1-208ENST00000426059 POGKQ9P215 609 aa23.72■■□□□ 1.39
FN1-208ENST00000426059 MINK1Q8N4C8 1332 aaPredicted RBP23.71■■□□□ 1.39
FN1-208ENST00000426059 WAPLQ7Z5K2 1190 aa23.7■■□□□ 1.38
FN1-208ENST00000426059 TULP4Q9NRJ4 1543 aa23.69■■□□□ 1.38
FN1-208ENST00000426059 FAM9BQ8IZU0 186 aa23.69■■□□□ 1.38
FN1-208ENST00000426059 TMC1Q8TDI8 760 aa23.69■■□□□ 1.38
FN1-208ENST00000426059 CABP2Q9NPB3 220 aa23.68■■□□□ 1.38
FN1-208ENST00000426059 KTN1Q86UP2 1357 aaKnown RBP23.68■■□□□ 1.38
FN1-208ENST00000426059 EVC2Q86UK5 1308 aa23.67■■□□□ 1.38
FN1-208ENST00000426059 THEMISQ8N1K5 641 aaPredicted RBP23.67■■□□□ 1.38
FN1-208ENST00000426059 SLC12A5Q9H2X9 1139 aa23.67■■□□□ 1.38
FN1-208ENST00000426059 KNSTRNQ9Y448 316 aa23.67■■□□□ 1.38
FN1-208ENST00000426059 EID1Q9Y6B2 187 aa23.67■■□□□ 1.38
FN1-208ENST00000426059 SLC26A8Q96RN1 970 aa23.66■■□□□ 1.38
FN1-208ENST00000426059 PLEKHH1Q9ULM0 1364 aa23.66■■□□□ 1.38
FN1-208ENST00000426059 LRPPRCP42704 1394 aaKnown RBP23.66■■□□□ 1.38
FN1-208ENST00000426059 RALBP1Q15311 655 aa23.65■■□□□ 1.38
FN1-208ENST00000426059 ADAMTS13Q76LX8 1427 aa23.65■■□□□ 1.38
FN1-208ENST00000426059 SLIT1O75093 1534 aa23.64■■□□□ 1.37
FN1-208ENST00000426059 CEP170BQ9Y4F5 1589 aaPredicted RBP23.63■■□□□ 1.37
FN1-208ENST00000426059 CARD14Q9BXL6 1004 aa23.63■■□□□ 1.37
FN1-208ENST00000426059 PARD3Q8TEW0 1356 aa23.63■■□□□ 1.37
FN1-208ENST00000426059 PLEKHG1Q9ULL1 1385 aa23.63■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 11.7 ms