RNA–Protein interactions for RNA: ENST00000425703.5

MSH5-207, Transcript of mutS homolog 5, humanhuman

TSL 5

Gene MSH5, Length 694 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-207ENST00000425703 PLEKHG1Q9ULL1 1385 aa27.62■■■□□ 2.01
MSH5-207ENST00000425703 PPP1R15AO75807 674 aaPredicted RBP27.6■■■□□ 2.01
MSH5-207ENST00000425703 SETD5Q9C0A6 1442 aa27.58■■■□□ 2.01
MSH5-207ENST00000425703 MYO5BQ9ULV0 1848 aa27.58■■■□□ 2.01
MSH5-207ENST00000425703 UBAP1LF5GYI3 381 aa27.56■■■□□ 2
MSH5-207ENST00000425703 SLC26A8Q96RN1 970 aa27.56■■■□□ 2
MSH5-207ENST00000425703 LRRC7Q96NW7 1537 aa27.56■■■□□ 2
MSH5-207ENST00000425703 STRCP1A6NGW2 1772 aa27.54■■■□□ 2
MSH5-207ENST00000425703 KCNA6P17658 529 aa27.54■■■□□ 2
MSH5-207ENST00000425703 BCANQ96GW7 911 aa27.54■■■□□ 2
MSH5-207ENST00000425703 TBX22Q9Y458 520 aa27.52■■■□□ 2
MSH5-207ENST00000425703 CLTCL1P53675 1640 aa27.52■■■□□ 2
MSH5-207ENST00000425703 MPHOSPH9Q99550 1183 aa27.51■■□□□ 1.99
MSH5-207ENST00000425703 TOM1O60784 492 aa27.5■■□□□ 1.99
MSH5-207ENST00000425703 ZNF326Q5BKZ1 582 aaKnown RBP27.48■■□□□ 1.99
MSH5-207ENST00000425703 NUTM2DQ5VT03 806 aaPredicted RBP27.47■■□□□ 1.99
MSH5-207ENST00000425703 ADAMTS13Q76LX8 1427 aa27.47■■□□□ 1.99
MSH5-207ENST00000425703 DIP2AQ14689 1571 aa27.46■■□□□ 1.99
MSH5-207ENST00000425703 NWD1Q149M9 1564 aa27.46■■□□□ 1.99
MSH5-207ENST00000425703 RAB3GAP2Q9H2M9 1393 aa27.46■■□□□ 1.99
MSH5-207ENST00000425703 NKTRP30414 1462 aaKnown RBP27.45■■□□□ 1.99
MSH5-207ENST00000425703 PIK3R4Q99570 1358 aa27.45■■□□□ 1.98
MSH5-207ENST00000425703 HRCP23327 699 aa27.43■■□□□ 1.98
MSH5-207ENST00000425703 FOXD1Q16676 465 aa27.42■■□□□ 1.98
MSH5-207ENST00000425703 RPGRIP1LQ68CZ1 1315 aa27.41■■□□□ 1.98
MSH5-207ENST00000425703 KIF1BO60333 1816 aa27.41■■□□□ 1.98
MSH5-207ENST00000425703 NEXMIFQ5QGS0 1516 aa27.41■■□□□ 1.98
MSH5-207ENST00000425703 CCDC144AA2RUR9 1427 aa27.41■■□□□ 1.98
MSH5-207ENST00000425703 TMEM94Q12767 1356 aa27.4■■□□□ 1.98
MSH5-207ENST00000425703 SETBP1Q9Y6X0 1596 aa27.39■■□□□ 1.98
MSH5-207ENST00000425703 PROSER2Q86WR7 435 aaPredicted RBP27.39■■□□□ 1.98
MSH5-207ENST00000425703 SENP3Q9H4L4 574 aaPredicted RBP27.39■■□□□ 1.98
MSH5-207ENST00000425703 ALKQ9UM73 1620 aa27.37■■□□□ 1.97
MSH5-207ENST00000425703 VGFO15240 615 aaPredicted RBP27.36■■□□□ 1.97
MSH5-207ENST00000425703 CHD2O14647 1828 aaKnown RBP27.36■■□□□ 1.97
MSH5-207ENST00000425703 PIP4K2BP78356 416 aa27.34■■□□□ 1.97
MSH5-207ENST00000425703 NRXN3Q9Y4C0 1643 aa27.33■■□□□ 1.97
MSH5-207ENST00000425703 NCOA3Q9Y6Q9 1424 aa27.33■■□□□ 1.96
MSH5-207ENST00000425703 XIRP1Q702N8 1843 aaKnown RBP27.32■■□□□ 1.96
MSH5-207ENST00000425703 SCAF1Q9H7N4 1312 aaKnown RBP27.32■■□□□ 1.96
MSH5-207ENST00000425703 SPATA31E1Q6ZUB1 1445 aa27.31■■□□□ 1.96
MSH5-207ENST00000425703 AMOTL2Q9Y2J4 779 aa27.28■■□□□ 1.96
MSH5-207ENST00000425703 PTPRUQ92729 1446 aa27.27■■□□□ 1.96
MSH5-207ENST00000425703 MSH6P52701 1360 aa27.26■■□□□ 1.95
MSH5-207ENST00000425703 METP08581 1390 aa27.25■■□□□ 1.95
MSH5-207ENST00000425703 RBM33Q96EV2 1170 aaKnown RBP27.25■■□□□ 1.95
MSH5-207ENST00000425703 ANKRD30BQ9BXX2 1392 aa27.24■■□□□ 1.95
MSH5-207ENST00000425703 HSPA1LP34931 641 aa27.24■■□□□ 1.95
MSH5-207ENST00000425703 PPLO60437 1756 aa27.22■■□□□ 1.95
MSH5-207ENST00000425703 RGL3Q3MIN7 710 aa27.21■■□□□ 1.95
MSH5-207ENST00000425703 FAM135BQ49AJ0 1406 aa27.21■■□□□ 1.95
MSH5-207ENST00000425703 XRN1Q8IZH2 1706 aaKnown RBP27.21■■□□□ 1.95
MSH5-207ENST00000425703 C19orf44Q9H6X5 657 aa27.19■■□□□ 1.94
MSH5-207ENST00000425703 C14orf37Q86TY3 774 aa27.16■■□□□ 1.94
MSH5-207ENST00000425703 ADGRF5Q8IZF2 1346 aa27.16■■□□□ 1.94
MSH5-207ENST00000425703 PRAG1Q86YV5 1406 aa27.15■■□□□ 1.94
MSH5-207ENST00000425703 SLAIN2Q9P270 581 aa27.14■■□□□ 1.94
MSH5-207ENST00000425703 CADPS2Q86UW7 1296 aa27.13■■□□□ 1.93
MSH5-207ENST00000425703 SETD1AO15047 1707 aaKnown RBP27.13■■□□□ 1.93
MSH5-207ENST00000425703 DCCP43146 1447 aa27.12■■□□□ 1.93
MSH5-207ENST00000425703 PTCH1Q13635 1447 aa27.12■■□□□ 1.93
MSH5-207ENST00000425703 IFT172Q9UG01 1749 aa27.12■■□□□ 1.93
MSH5-207ENST00000425703 PIK3C2GO75747 1445 aa27.1■■□□□ 1.93
MSH5-207ENST00000425703 ATF3P18847 181 aa27.1■■□□□ 1.93
MSH5-207ENST00000425703 MYOM2P54296 1465 aa27.08■■□□□ 1.93
MSH5-207ENST00000425703 NRXN1Q9ULB1 1477 aa27.06■■□□□ 1.92
MSH5-207ENST00000425703 SIPA1L2Q9P2F8 1722 aaPredicted RBP27.06■■□□□ 1.92
MSH5-207ENST00000425703 ADGRL3Q9HAR2 1447 aa27.05■■□□□ 1.92
MSH5-207ENST00000425703 ROBO1Q9Y6N7 1651 aa27.05■■□□□ 1.92
MSH5-207ENST00000425703 STAC3Q96MF2 364 aa27.04■■□□□ 1.92
MSH5-207ENST00000425703 ROBO2Q9HCK4 1378 aa27.04■■□□□ 1.92
MSH5-207ENST00000425703 C14orf93Q9H972 538 aaKnown RBP27.02■■□□□ 1.92
MSH5-207ENST00000425703 DISP3Q9P2K9 1392 aa27.01■■□□□ 1.91
MSH5-207ENST00000425703 TECPR2O15040 1411 aa27■■□□□ 1.91
MSH5-207ENST00000425703 LRPPRCP42704 1394 aaKnown RBP27■■□□□ 1.91
MSH5-207ENST00000425703 ABCC11Q96J66 1382 aa26.99■■□□□ 1.91
MSH5-207ENST00000425703 MST1RQ04912 1400 aa26.96■■□□□ 1.91
MSH5-207ENST00000425703 ASXL1Q8IXJ9 1541 aa26.95■■□□□ 1.91
MSH5-207ENST00000425703 LAMC1P11047 1609 aa26.94■■□□□ 1.9
MSH5-207ENST00000425703 TMEM132EQ6IEE7 984 aa26.94■■□□□ 1.9
MSH5-207ENST00000425703 YTHDC2Q9H6S0 1430 aaKnown RBP26.93■■□□□ 1.9
MSH5-207ENST00000425703 DCAF11Q8TEB1 546 aa26.93■■□□□ 1.9
MSH5-207ENST00000425703 SIRT1Q96EB6 747 aa26.93■■□□□ 1.9
MSH5-207ENST00000425703 NALCNQ8IZF0 1738 aa26.93■■□□□ 1.9
MSH5-207ENST00000425703 CFAP70Q5T0N1 1121 aa26.92■■□□□ 1.9
MSH5-207ENST00000425703 BRINP3Q76B58 766 aa26.92■■□□□ 1.9
MSH5-207ENST00000425703 STK26Q9P289 416 aa26.91■■□□□ 1.9
MSH5-207ENST00000425703 DHX57Q6P158 1386 aaKnown RBP26.91■■□□□ 1.9
MSH5-207ENST00000425703 MED1Q15648 1581 aaPredicted RBP26.9■■□□□ 1.9
MSH5-207ENST00000425703 KNDC1Q76NI1 1749 aa26.89■■□□□ 1.9
MSH5-207ENST00000425703 AHDC1Q5TGY3 1603 aaPredicted RBP26.89■■□□□ 1.9
MSH5-207ENST00000425703 TRIM26Q12899 539 aaPredicted RBP26.88■■□□□ 1.89
MSH5-207ENST00000425703 KDM2AQ9Y2K7 1162 aa26.87■■□□□ 1.89
MSH5-207ENST00000425703 PHLPP1O60346 1717 aa26.86■■□□□ 1.89
MSH5-207ENST00000425703 WAPLQ7Z5K2 1190 aa26.85■■□□□ 1.89
MSH5-207ENST00000425703 C1orf167Q5SNV9 1468 aa26.85■■□□□ 1.89
MSH5-207ENST00000425703 JCADQ9P266 1359 aa26.84■■□□□ 1.89
MSH5-207ENST00000425703 COL16A1Q07092 1604 aaPredicted RBP26.84■■□□□ 1.89
MSH5-207ENST00000425703 CDC42BPGQ6DT37 1551 aa26.84■■□□□ 1.89
MSH5-207ENST00000425703 ADGRB1O14514 1584 aa26.82■■□□□ 1.88
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms