RNA–Protein interactions for RNA: ENST00000425237.5

NEK6-208, Transcript of NIMA related kinase 6, humanhuman

TSL 3

Gene NEK6, Length 806 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NEK6-208ENST00000425237 EID1Q9Y6B2 187 aa16.66■□□□□ 0.26
NEK6-208ENST00000425237 ZFYVE9O95405 1425 aa16.65■□□□□ 0.26
NEK6-208ENST00000425237 RIMS2Q9UQ26 1411 aa16.65■□□□□ 0.26
NEK6-208ENST00000425237 STAC3Q96MF2 364 aa16.65■□□□□ 0.26
NEK6-208ENST00000425237 KIF1BO60333 1816 aa16.65■□□□□ 0.26
NEK6-208ENST00000425237 TXNDC2Q86VQ3 553 aa16.64■□□□□ 0.25
NEK6-208ENST00000425237 LTKP29376 864 aa16.63■□□□□ 0.25
NEK6-208ENST00000425237 DMRT2Q9Y5R5 561 aa16.63■□□□□ 0.25
NEK6-208ENST00000425237 VGFO15240 615 aaPredicted RBP16.62■□□□□ 0.25
NEK6-208ENST00000425237 SCAF11Q99590 1463 aaKnown RBP16.61■□□□□ 0.25
NEK6-208ENST00000425237 TIMELESSQ9UNS1 1208 aa16.61■□□□□ 0.25
NEK6-208ENST00000425237 NEXMIFQ5QGS0 1516 aa16.6■□□□□ 0.25
NEK6-208ENST00000425237 PPP1R15AO75807 674 aaPredicted RBP16.6■□□□□ 0.25
NEK6-208ENST00000425237 NCKAP5LQ9HCH0 1330 aa16.6■□□□□ 0.25
NEK6-208ENST00000425237 DCAF11Q8TEB1 546 aa16.59■□□□□ 0.25
NEK6-208ENST00000425237 L3MBTL2Q969R5 705 aa16.59■□□□□ 0.25
NEK6-208ENST00000425237 MED14O60244 1454 aa16.59■□□□□ 0.25
NEK6-208ENST00000425237 TONSLQ96HA7 1378 aa16.58■□□□□ 0.24
NEK6-208ENST00000425237 PLEKHG1Q9ULL1 1385 aa16.58■□□□□ 0.24
NEK6-208ENST00000425237 MYO5BQ9ULV0 1848 aa16.58■□□□□ 0.24
NEK6-208ENST00000425237 NUTM2DQ5VT03 806 aaPredicted RBP16.57■□□□□ 0.24
NEK6-208ENST00000425237 STRCQ7RTU9 1775 aa16.56■□□□□ 0.24
NEK6-208ENST00000425237 MYOM2P54296 1465 aa16.56■□□□□ 0.24
NEK6-208ENST00000425237 NPHP4O75161 1426 aaPredicted RBP16.55■□□□□ 0.24
NEK6-208ENST00000425237 ADGRF5Q8IZF2 1346 aa16.55■□□□□ 0.24
NEK6-208ENST00000425237 KDM2AQ9Y2K7 1162 aa16.54■□□□□ 0.24
NEK6-208ENST00000425237 NRXN1Q9ULB1 1477 aa16.54■□□□□ 0.24
NEK6-208ENST00000425237 PPLO60437 1756 aa16.53■□□□□ 0.24
NEK6-208ENST00000425237 IFT172Q9UG01 1749 aa16.51■□□□□ 0.23
NEK6-208ENST00000425237 BCANQ96GW7 911 aa16.51■□□□□ 0.23
NEK6-208ENST00000425237 TBX22Q9Y458 520 aa16.51■□□□□ 0.23
NEK6-208ENST00000425237 PIK3C2GO75747 1445 aa16.51■□□□□ 0.23
NEK6-208ENST00000425237 ADAMTS13Q76LX8 1427 aa16.5■□□□□ 0.23
NEK6-208ENST00000425237 SETBP1Q9Y6X0 1596 aa16.5■□□□□ 0.23
NEK6-208ENST00000425237 POLR1AO95602 1720 aaPredicted RBP16.5■□□□□ 0.23
NEK6-208ENST00000425237 PRAG1Q86YV5 1406 aa16.48■□□□□ 0.23
NEK6-208ENST00000425237 SLC26A8Q96RN1 970 aa16.48■□□□□ 0.23
NEK6-208ENST00000425237 C14orf93Q9H972 538 aaKnown RBP16.48■□□□□ 0.23
NEK6-208ENST00000425237 IQGAP1P46940 1657 aa16.47■□□□□ 0.23
NEK6-208ENST00000425237 FBXO41Q8TF61 875 aa16.46■□□□□ 0.23
NEK6-208ENST00000425237 PIK3R4Q99570 1358 aa16.46■□□□□ 0.23
NEK6-208ENST00000425237 DIP2AQ14689 1571 aa16.46■□□□□ 0.23
NEK6-208ENST00000425237 CFAP70Q5T0N1 1121 aa16.45■□□□□ 0.22
NEK6-208ENST00000425237 NRXN3Q9Y4C0 1643 aa16.45■□□□□ 0.22
NEK6-208ENST00000425237 SENP3Q9H4L4 574 aaPredicted RBP16.44■□□□□ 0.22
NEK6-208ENST00000425237 ALKQ9UM73 1620 aa16.44■□□□□ 0.22
NEK6-208ENST00000425237 NBPF8Q3BBV2 869 aa16.43■□□□□ 0.22
NEK6-208ENST00000425237 METP08581 1390 aa16.42■□□□□ 0.22
NEK6-208ENST00000425237 KCNA6P17658 529 aa16.41■□□□□ 0.22
NEK6-208ENST00000425237 LAMC1P11047 1609 aa16.39■□□□□ 0.21
NEK6-208ENST00000425237 NBPF1Q3BBV0 1214 aa16.38■□□□□ 0.21
NEK6-208ENST00000425237 TMEM132EQ6IEE7 984 aa16.38■□□□□ 0.21
NEK6-208ENST00000425237 LRPPRCP42704 1394 aaKnown RBP16.38■□□□□ 0.21
NEK6-208ENST00000425237 PTPRUQ92729 1446 aa16.37■□□□□ 0.21
NEK6-208ENST00000425237 KIAA1210Q9ULL0 1709 aa16.37■□□□□ 0.21
NEK6-208ENST00000425237 ZEB1P37275 1124 aaPredicted RBP16.37■□□□□ 0.21
NEK6-208ENST00000425237 AMOTL2Q9Y2J4 779 aa16.37■□□□□ 0.21
NEK6-208ENST00000425237 ADGRB1O14514 1584 aa16.37■□□□□ 0.21
NEK6-208ENST00000425237 ZNF335Q9H4Z2 1342 aaPredicted RBP16.37■□□□□ 0.21
NEK6-208ENST00000425237 GPRASP1Q5JY77 1395 aa16.37■□□□□ 0.21
NEK6-208ENST00000425237 ABCC11Q96J66 1382 aa16.37■□□□□ 0.21
NEK6-208ENST00000425237 SETD1AO15047 1707 aaKnown RBP16.36■□□□□ 0.21
NEK6-208ENST00000425237 RALGAPBQ86X10 1494 aa16.36■□□□□ 0.21
NEK6-208ENST00000425237 ASXL1Q8IXJ9 1541 aa16.36■□□□□ 0.21
NEK6-208ENST00000425237 CERKQ8TCT0 537 aa16.36■□□□□ 0.21
NEK6-208ENST00000425237 ROCK2O75116 1388 aaKnown RBP16.36■□□□□ 0.21
NEK6-208ENST00000425237 SIRT1Q96EB6 747 aa16.35■□□□□ 0.21
NEK6-208ENST00000425237 YTHDC2Q9H6S0 1430 aaKnown RBP16.35■□□□□ 0.21
NEK6-208ENST00000425237 TECPR2O15040 1411 aa16.34■□□□□ 0.21
NEK6-208ENST00000425237 NWD1Q149M9 1564 aa16.34■□□□□ 0.21
NEK6-208ENST00000425237 TRPM1Q7Z4N2 1603 aa16.34■□□□□ 0.21
NEK6-208ENST00000425237 IQSEC2Q5JU85 1478 aa16.33■□□□□ 0.2
NEK6-208ENST00000425237 NKTRP30414 1462 aaKnown RBP16.32■□□□□ 0.2
NEK6-208ENST00000425237 PTCH1Q13635 1447 aa16.32■□□□□ 0.2
NEK6-208ENST00000425237 CARD11Q9BXL7 1154 aa16.32■□□□□ 0.2
NEK6-208ENST00000425237 STK26Q9P289 416 aa16.32■□□□□ 0.2
NEK6-208ENST00000425237 CPS1P31327 1500 aa16.31■□□□□ 0.2
NEK6-208ENST00000425237 CHD2O14647 1828 aaKnown RBP16.31■□□□□ 0.2
NEK6-208ENST00000425237 LTBP4Q8N2S1 1624 aa16.3■□□□□ 0.2
NEK6-208ENST00000425237 TRAK1Q9UPV9 953 aa16.3■□□□□ 0.2
NEK6-208ENST00000425237 XRN1Q8IZH2 1706 aaKnown RBP16.3■□□□□ 0.2
NEK6-208ENST00000425237 DLC1Q96QB1 1528 aa16.29■□□□□ 0.2
NEK6-208ENST00000425237 FAM135BQ49AJ0 1406 aa16.29■□□□□ 0.2
NEK6-208ENST00000425237 PROSER2Q86WR7 435 aaPredicted RBP16.29■□□□□ 0.2
NEK6-208ENST00000425237 NCOA3Q9Y6Q9 1424 aa16.28■□□□□ 0.2
NEK6-208ENST00000425237 ROBO2Q9HCK4 1378 aa16.28■□□□□ 0.2
NEK6-208ENST00000425237 LRRC7Q96NW7 1537 aa16.26■□□□□ 0.19
NEK6-208ENST00000425237 EIF3AQ14152 1382 aaKnown RBP16.26■□□□□ 0.19
NEK6-208ENST00000425237 KNDC1Q76NI1 1749 aa16.25■□□□□ 0.19
NEK6-208ENST00000425237 WAPLQ7Z5K2 1190 aa16.25■□□□□ 0.19
NEK6-208ENST00000425237 PRAM1Q96QH2 718 aa16.25■□□□□ 0.19
NEK6-208ENST00000425237 POGKQ9P215 609 aa16.25■□□□□ 0.19
NEK6-208ENST00000425237 STRCP1A6NGW2 1772 aa16.25■□□□□ 0.19
NEK6-208ENST00000425237 TMEM94Q12767 1356 aa16.25■□□□□ 0.19
NEK6-208ENST00000425237 PLEKHH1Q9ULM0 1364 aa16.23■□□□□ 0.19
NEK6-208ENST00000425237 CENPJQ9HC77 1338 aaPredicted RBP16.22■□□□□ 0.19
NEK6-208ENST00000425237 RBM33Q96EV2 1170 aaKnown RBP16.21■□□□□ 0.19
NEK6-208ENST00000425237 USP47Q96K76 1375 aa16.21■□□□□ 0.19
NEK6-208ENST00000425237 EIF4G2P78344 907 aaKnown RBP eCLIP16.2■□□□□ 0.18
NEK6-208ENST00000425237 C19orf44Q9H6X5 657 aa16.2■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms