RNA–Protein interactions for RNA: ENST00000421939.5

CDK9-202, Transcript of cyclin dependent kinase 9, humanhuman

TSL 3

Gene CDK9, Length 702 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK9-202ENST00000421939 ACIN1Q9UKV3 1341 aaKnown RBP39.38■■■■□ 3.89
CDK9-202ENST00000421939 HDGFP51858 240 aaKnown RBP39.37■■■■□ 3.89
CDK9-202ENST00000421939 RAB3GAP2Q9H2M9 1393 aa39.35■■■■□ 3.89
CDK9-202ENST00000421939 PLEKHG1Q9ULL1 1385 aa39.34■■■■□ 3.89
CDK9-202ENST00000421939 STRCP1A6NGW2 1772 aa39.34■■■■□ 3.89
CDK9-202ENST00000421939 PPP1R15AO75807 674 aaPredicted RBP39.34■■■■□ 3.89
CDK9-202ENST00000421939 ABCF1Q8NE71 845 aaKnown RBP eCLIP39.33■■■■□ 3.89
CDK9-202ENST00000421939 MPHOSPH9Q99550 1183 aa39.31■■■■□ 3.88
CDK9-202ENST00000421939 KIF1BO60333 1816 aa39.28■■■■□ 3.88
CDK9-202ENST00000421939 BCANQ96GW7 911 aa39.27■■■■□ 3.88
CDK9-202ENST00000421939 SLC26A8Q96RN1 970 aa39.27■■■■□ 3.88
CDK9-202ENST00000421939 FOXD1Q16676 465 aa39.26■■■■□ 3.88
CDK9-202ENST00000421939 NUTM2DQ5VT03 806 aaPredicted RBP39.24■■■■□ 3.87
CDK9-202ENST00000421939 ZNF326Q5BKZ1 582 aaKnown RBP39.22■■■■□ 3.87
CDK9-202ENST00000421939 SENP3Q9H4L4 574 aaPredicted RBP39.22■■■■□ 3.87
CDK9-202ENST00000421939 LRRC7Q96NW7 1537 aa39.22■■■■□ 3.87
CDK9-202ENST00000421939 NEXMIFQ5QGS0 1516 aa39.18■■■■□ 3.86
CDK9-202ENST00000421939 DIP2AQ14689 1571 aa39.17■■■■□ 3.86
CDK9-202ENST00000421939 NWD1Q149M9 1564 aa39.16■■■■□ 3.86
CDK9-202ENST00000421939 CCDC144AA2RUR9 1427 aa39.16■■■■□ 3.86
CDK9-202ENST00000421939 ADAMTS13Q76LX8 1427 aa39.15■■■■□ 3.86
CDK9-202ENST00000421939 UBAP1LF5GYI3 381 aa39.15■■■■□ 3.86
CDK9-202ENST00000421939 KCNA6P17658 529 aa39.13■■■■□ 3.85
CDK9-202ENST00000421939 TBX22Q9Y458 520 aa39.11■■■■□ 3.85
CDK9-202ENST00000421939 HRCP23327 699 aa39.1■■■■□ 3.85
CDK9-202ENST00000421939 SETBP1Q9Y6X0 1596 aa39.1■■■■□ 3.85
CDK9-202ENST00000421939 NKTRP30414 1462 aaKnown RBP39.1■■■■□ 3.85
CDK9-202ENST00000421939 NRXN3Q9Y4C0 1643 aa39.08■■■■□ 3.85
CDK9-202ENST00000421939 CHD2O14647 1828 aaKnown RBP39.06■■■■□ 3.84
CDK9-202ENST00000421939 XIRP1Q702N8 1843 aaKnown RBP39.03■■■■□ 3.84
CDK9-202ENST00000421939 PIK3R4Q99570 1358 aa39.03■■■■□ 3.84
CDK9-202ENST00000421939 SPATA31E1Q6ZUB1 1445 aa39.01■■■■□ 3.84
CDK9-202ENST00000421939 RPGRIP1LQ68CZ1 1315 aa39.01■■■■□ 3.84
CDK9-202ENST00000421939 TOM1O60784 492 aa39■■■■□ 3.83
CDK9-202ENST00000421939 PPLO60437 1756 aa39■■■■□ 3.83
CDK9-202ENST00000421939 TMEM94Q12767 1356 aa38.99■■■■□ 3.83
CDK9-202ENST00000421939 ALKQ9UM73 1620 aa38.97■■■■□ 3.83
CDK9-202ENST00000421939 PROSER2Q86WR7 435 aaPredicted RBP38.97■■■■□ 3.83
CDK9-202ENST00000421939 VGFO15240 615 aaPredicted RBP38.95■■■■□ 3.83
CDK9-202ENST00000421939 PTPRUQ92729 1446 aa38.89■■■■□ 3.82
CDK9-202ENST00000421939 RGL3Q3MIN7 710 aa38.89■■■■□ 3.82
CDK9-202ENST00000421939 IFT172Q9UG01 1749 aa38.89■■■■□ 3.82
CDK9-202ENST00000421939 SCAF1Q9H7N4 1312 aaKnown RBP38.89■■■■□ 3.82
CDK9-202ENST00000421939 ANKRD30BQ9BXX2 1392 aa38.88■■■■□ 3.81
CDK9-202ENST00000421939 PIP4K2BP78356 416 aa38.88■■■■□ 3.81
CDK9-202ENST00000421939 RBM33Q96EV2 1170 aaKnown RBP38.88■■■■□ 3.81
CDK9-202ENST00000421939 METP08581 1390 aa38.87■■■■□ 3.81
CDK9-202ENST00000421939 XRN1Q8IZH2 1706 aaKnown RBP38.87■■■■□ 3.81
CDK9-202ENST00000421939 SETD1AO15047 1707 aaKnown RBP38.84■■■■□ 3.81
CDK9-202ENST00000421939 AMOTL2Q9Y2J4 779 aa38.84■■■■□ 3.81
CDK9-202ENST00000421939 MSH6P52701 1360 aa38.8■■■■□ 3.8
CDK9-202ENST00000421939 NCOA3Q9Y6Q9 1424 aa38.8■■■■□ 3.8
CDK9-202ENST00000421939 ADGRF5Q8IZF2 1346 aa38.78■■■■□ 3.8
CDK9-202ENST00000421939 PIK3C2GO75747 1445 aa38.71■■■■□ 3.79
CDK9-202ENST00000421939 C14orf37Q86TY3 774 aa38.7■■■■□ 3.79
CDK9-202ENST00000421939 MYOM2P54296 1465 aa38.7■■■■□ 3.79
CDK9-202ENST00000421939 HSPA1LP34931 641 aa38.67■■■■□ 3.78
CDK9-202ENST00000421939 PTCH1Q13635 1447 aa38.65■■■■□ 3.78
CDK9-202ENST00000421939 PRAG1Q86YV5 1406 aa38.65■■■■□ 3.78
CDK9-202ENST00000421939 NRXN1Q9ULB1 1477 aa38.65■■■■□ 3.78
CDK9-202ENST00000421939 SIPA1L2Q9P2F8 1722 aaPredicted RBP38.63■■■■□ 3.78
CDK9-202ENST00000421939 FAM135BQ49AJ0 1406 aa38.62■■■■□ 3.77
CDK9-202ENST00000421939 TRIM26Q12899 539 aaPredicted RBP38.61■■■■□ 3.77
CDK9-202ENST00000421939 C19orf44Q9H6X5 657 aa38.61■■■■□ 3.77
CDK9-202ENST00000421939 ROBO1Q9Y6N7 1651 aa38.58■■■■□ 3.77
CDK9-202ENST00000421939 ASXL1Q8IXJ9 1541 aa38.58■■■■□ 3.77
CDK9-202ENST00000421939 ROBO2Q9HCK4 1378 aa38.57■■■■□ 3.77
CDK9-202ENST00000421939 DCCP43146 1447 aa38.57■■■■□ 3.77
CDK9-202ENST00000421939 LAMC1P11047 1609 aa38.56■■■■□ 3.76
CDK9-202ENST00000421939 CADPS2Q86UW7 1296 aa38.56■■■■□ 3.76
CDK9-202ENST00000421939 ADGRL3Q9HAR2 1447 aa38.55■■■■□ 3.76
CDK9-202ENST00000421939 SLAIN2Q9P270 581 aa38.55■■■■□ 3.76
CDK9-202ENST00000421939 ATF3P18847 181 aa38.54■■■■□ 3.76
CDK9-202ENST00000421939 NALCNQ8IZF0 1738 aa38.54■■■■□ 3.76
CDK9-202ENST00000421939 LRPPRCP42704 1394 aaKnown RBP38.5■■■■□ 3.75
CDK9-202ENST00000421939 C14orf93Q9H972 538 aaKnown RBP38.5■■■■□ 3.75
CDK9-202ENST00000421939 TECPR2O15040 1411 aa38.49■■■■□ 3.75
CDK9-202ENST00000421939 DHX57Q6P158 1386 aaKnown RBP38.48■■■■□ 3.75
CDK9-202ENST00000421939 KNDC1Q76NI1 1749 aa38.48■■■■□ 3.75
CDK9-202ENST00000421939 TMEM132EQ6IEE7 984 aa38.47■■■■□ 3.75
CDK9-202ENST00000421939 DCAF11Q8TEB1 546 aa38.47■■■■□ 3.75
CDK9-202ENST00000421939 CFAP70Q5T0N1 1121 aa38.45■■■■□ 3.75
CDK9-202ENST00000421939 YTHDC2Q9H6S0 1430 aaKnown RBP38.45■■■■□ 3.75
CDK9-202ENST00000421939 STAC3Q96MF2 364 aa38.44■■■■□ 3.74
CDK9-202ENST00000421939 STK26Q9P289 416 aa38.44■■■■□ 3.74
CDK9-202ENST00000421939 KDM2AQ9Y2K7 1162 aa38.44■■■■□ 3.74
CDK9-202ENST00000421939 ABCC11Q96J66 1382 aa38.44■■■■□ 3.74
CDK9-202ENST00000421939 MST1RQ04912 1400 aa38.4■■■■□ 3.74
CDK9-202ENST00000421939 ADGRB1O14514 1584 aa38.36■■■■□ 3.73
CDK9-202ENST00000421939 PHLPP1O60346 1717 aa38.33■■■■□ 3.73
CDK9-202ENST00000421939 CDC42BPGQ6DT37 1551 aa38.31■■■■□ 3.72
CDK9-202ENST00000421939 BRINP3Q76B58 766 aa38.3■■■■□ 3.72
CDK9-202ENST00000421939 WAPLQ7Z5K2 1190 aa38.3■■■■□ 3.72
CDK9-202ENST00000421939 AHDC1Q5TGY3 1603 aaPredicted RBP38.3■■■■□ 3.72
CDK9-202ENST00000421939 PLEKHH1Q9ULM0 1364 aa38.3■■■■□ 3.72
CDK9-202ENST00000421939 DISP3Q9P2K9 1392 aa38.29■■■■□ 3.72
CDK9-202ENST00000421939 MED1Q15648 1581 aaPredicted RBP38.28■■■■□ 3.72
CDK9-202ENST00000421939 SIRT1Q96EB6 747 aa38.27■■■■□ 3.72
CDK9-202ENST00000421939 DLC1Q96QB1 1528 aa38.27■■■■□ 3.72
CDK9-202ENST00000421939 C1orf167Q5SNV9 1468 aa38.26■■■■□ 3.72
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms