RNA–Protein interactions for RNA: ENST00000421827.2

UBXN11-208, Transcript of UBX domain protein 11, humanhuman

TSL 5

Gene UBXN11, Length 728 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-208ENST00000421827 SLC26A8Q96RN1 970 aa27.11■■□□□ 1.93
UBXN11-208ENST00000421827 LRRC7Q96NW7 1537 aa27.11■■□□□ 1.93
UBXN11-208ENST00000421827 ABCF1Q8NE71 845 aaKnown RBP eCLIP27.1■■□□□ 1.93
UBXN11-208ENST00000421827 BCANQ96GW7 911 aa27.1■■□□□ 1.93
UBXN11-208ENST00000421827 PLEKHG1Q9ULL1 1385 aa27.09■■□□□ 1.93
UBXN11-208ENST00000421827 TOM1O60784 492 aa27.07■■□□□ 1.92
UBXN11-208ENST00000421827 SLC4A1APQ9BWU0 796 aaKnown RBP27.06■■□□□ 1.92
UBXN11-208ENST00000421827 SENP3Q9H4L4 574 aaPredicted RBP27.05■■□□□ 1.92
UBXN11-208ENST00000421827 KCNA6P17658 529 aa27.04■■□□□ 1.92
UBXN11-208ENST00000421827 TRPM2O94759 1503 aa27.03■■□□□ 1.92
UBXN11-208ENST00000421827 NUTM2DQ5VT03 806 aaPredicted RBP27.03■■□□□ 1.92
UBXN11-208ENST00000421827 SCAF1Q9H7N4 1312 aaKnown RBP26.99■■□□□ 1.91
UBXN11-208ENST00000421827 CLTCL1P53675 1640 aa26.99■■□□□ 1.91
UBXN11-208ENST00000421827 PIP4K2BP78356 416 aa26.99■■□□□ 1.91
UBXN11-208ENST00000421827 ZNF326Q5BKZ1 582 aaKnown RBP26.98■■□□□ 1.91
UBXN11-208ENST00000421827 TBX22Q9Y458 520 aa26.98■■□□□ 1.91
UBXN11-208ENST00000421827 SETD5Q9C0A6 1442 aa26.95■■□□□ 1.9
UBXN11-208ENST00000421827 NWD1Q149M9 1564 aa26.95■■□□□ 1.9
UBXN11-208ENST00000421827 ALKQ9UM73 1620 aa26.94■■□□□ 1.9
UBXN11-208ENST00000421827 ADAMTS13Q76LX8 1427 aa26.94■■□□□ 1.9
UBXN11-208ENST00000421827 PROSER2Q86WR7 435 aaPredicted RBP26.94■■□□□ 1.9
UBXN11-208ENST00000421827 TMEM94Q12767 1356 aa26.94■■□□□ 1.9
UBXN11-208ENST00000421827 NKTRP30414 1462 aaKnown RBP26.93■■□□□ 1.9
UBXN11-208ENST00000421827 ACIN1Q9UKV3 1341 aaKnown RBP26.92■■□□□ 1.9
UBXN11-208ENST00000421827 XIRP1Q702N8 1843 aaKnown RBP26.92■■□□□ 1.9
UBXN11-208ENST00000421827 FOXD1Q16676 465 aa26.91■■□□□ 1.9
UBXN11-208ENST00000421827 MPHOSPH9Q99550 1183 aa26.91■■□□□ 1.9
UBXN11-208ENST00000421827 DIP2AQ14689 1571 aa26.91■■□□□ 1.9
UBXN11-208ENST00000421827 KIF1BO60333 1816 aa26.9■■□□□ 1.9
UBXN11-208ENST00000421827 CHD2O14647 1828 aaKnown RBP26.89■■□□□ 1.9
UBXN11-208ENST00000421827 PIK3R4Q99570 1358 aa26.87■■□□□ 1.89
UBXN11-208ENST00000421827 RBM33Q96EV2 1170 aaKnown RBP26.87■■□□□ 1.89
UBXN11-208ENST00000421827 NEXMIFQ5QGS0 1516 aa26.86■■□□□ 1.89
UBXN11-208ENST00000421827 HSPA1LP34931 641 aa26.86■■□□□ 1.89
UBXN11-208ENST00000421827 SETBP1Q9Y6X0 1596 aa26.84■■□□□ 1.89
UBXN11-208ENST00000421827 RAB3GAP2Q9H2M9 1393 aa26.84■■□□□ 1.89
UBXN11-208ENST00000421827 NRXN3Q9Y4C0 1643 aa26.83■■□□□ 1.88
UBXN11-208ENST00000421827 RPGRIP1LQ68CZ1 1315 aa26.82■■□□□ 1.88
UBXN11-208ENST00000421827 CCDC144AA2RUR9 1427 aa26.81■■□□□ 1.88
UBXN11-208ENST00000421827 VGFO15240 615 aaPredicted RBP26.79■■□□□ 1.88
UBXN11-208ENST00000421827 AMOTL2Q9Y2J4 779 aa26.79■■□□□ 1.88
UBXN11-208ENST00000421827 MSH6P52701 1360 aa26.79■■□□□ 1.88
UBXN11-208ENST00000421827 PTPRUQ92729 1446 aa26.78■■□□□ 1.88
UBXN11-208ENST00000421827 NCOA3Q9Y6Q9 1424 aa26.77■■□□□ 1.88
UBXN11-208ENST00000421827 METP08581 1390 aa26.75■■□□□ 1.87
UBXN11-208ENST00000421827 FAM135BQ49AJ0 1406 aa26.73■■□□□ 1.87
UBXN11-208ENST00000421827 DISP3Q9P2K9 1392 aa26.73■■□□□ 1.87
UBXN11-208ENST00000421827 C14orf37Q86TY3 774 aa26.72■■□□□ 1.87
UBXN11-208ENST00000421827 SPATA31E1Q6ZUB1 1445 aa26.72■■□□□ 1.87
UBXN11-208ENST00000421827 PPLO60437 1756 aa26.71■■□□□ 1.87
UBXN11-208ENST00000421827 HRCP23327 699 aa26.7■■□□□ 1.86
UBXN11-208ENST00000421827 RGL3Q3MIN7 710 aa26.7■■□□□ 1.86
UBXN11-208ENST00000421827 XRN1Q8IZH2 1706 aaKnown RBP26.7■■□□□ 1.86
UBXN11-208ENST00000421827 C19orf44Q9H6X5 657 aa26.68■■□□□ 1.86
UBXN11-208ENST00000421827 SLAIN2Q9P270 581 aa26.68■■□□□ 1.86
UBXN11-208ENST00000421827 ANKRD30BQ9BXX2 1392 aa26.64■■□□□ 1.86
UBXN11-208ENST00000421827 ROBO1Q9Y6N7 1651 aa26.63■■□□□ 1.85
UBXN11-208ENST00000421827 ATF3P18847 181 aa26.63■■□□□ 1.85
UBXN11-208ENST00000421827 CADPS2Q86UW7 1296 aa26.63■■□□□ 1.85
UBXN11-208ENST00000421827 ADGRF5Q8IZF2 1346 aa26.63■■□□□ 1.85
UBXN11-208ENST00000421827 SETD1AO15047 1707 aaKnown RBP26.62■■□□□ 1.85
UBXN11-208ENST00000421827 SIPA1L2Q9P2F8 1722 aaPredicted RBP26.62■■□□□ 1.85
UBXN11-208ENST00000421827 IFT172Q9UG01 1749 aa26.58■■□□□ 1.85
UBXN11-208ENST00000421827 DCCP43146 1447 aa26.57■■□□□ 1.84
UBXN11-208ENST00000421827 PTCH1Q13635 1447 aa26.56■■□□□ 1.84
UBXN11-208ENST00000421827 MED1Q15648 1581 aaPredicted RBP26.54■■□□□ 1.84
UBXN11-208ENST00000421827 ROBO2Q9HCK4 1378 aa26.54■■□□□ 1.84
UBXN11-208ENST00000421827 ADGRL3Q9HAR2 1447 aa26.54■■□□□ 1.84
UBXN11-208ENST00000421827 PRAG1Q86YV5 1406 aa26.53■■□□□ 1.84
UBXN11-208ENST00000421827 PIK3C2GO75747 1445 aa26.52■■□□□ 1.84
UBXN11-208ENST00000421827 ILDR2Q71H61 639 aa26.49■■□□□ 1.83
UBXN11-208ENST00000421827 MYOM2P54296 1465 aa26.48■■□□□ 1.83
UBXN11-208ENST00000421827 PHLPP1O60346 1717 aa26.47■■□□□ 1.83
UBXN11-208ENST00000421827 NALCNQ8IZF0 1738 aa26.47■■□□□ 1.83
UBXN11-208ENST00000421827 NRXN1Q9ULB1 1477 aa26.47■■□□□ 1.83
UBXN11-208ENST00000421827 MST1RQ04912 1400 aa26.47■■□□□ 1.83
UBXN11-208ENST00000421827 BRINP3Q76B58 766 aa26.46■■□□□ 1.83
UBXN11-208ENST00000421827 TMEM132EQ6IEE7 984 aa26.45■■□□□ 1.82
UBXN11-208ENST00000421827 LRPPRCP42704 1394 aaKnown RBP26.45■■□□□ 1.82
UBXN11-208ENST00000421827 C14orf93Q9H972 538 aaKnown RBP26.44■■□□□ 1.82
UBXN11-208ENST00000421827 STK26Q9P289 416 aa26.44■■□□□ 1.82
UBXN11-208ENST00000421827 TECPR2O15040 1411 aa26.43■■□□□ 1.82
UBXN11-208ENST00000421827 ASXL1Q8IXJ9 1541 aa26.43■■□□□ 1.82
UBXN11-208ENST00000421827 ABCC11Q96J66 1382 aa26.42■■□□□ 1.82
UBXN11-208ENST00000421827 AHDC1Q5TGY3 1603 aaPredicted RBP26.41■■□□□ 1.82
UBXN11-208ENST00000421827 PHF23Q9BUL5 403 aaPredicted RBP26.41■■□□□ 1.82
UBXN11-208ENST00000421827 COL16A1Q07092 1604 aaPredicted RBP26.4■■□□□ 1.82
UBXN11-208ENST00000421827 CFAP70Q5T0N1 1121 aa26.4■■□□□ 1.82
UBXN11-208ENST00000421827 JCADQ9P266 1359 aa26.4■■□□□ 1.82
UBXN11-208ENST00000421827 YTHDC2Q9H6S0 1430 aaKnown RBP26.39■■□□□ 1.82
UBXN11-208ENST00000421827 DCAF11Q8TEB1 546 aa26.38■■□□□ 1.81
UBXN11-208ENST00000421827 LAMC1P11047 1609 aa26.37■■□□□ 1.81
UBXN11-208ENST00000421827 WAPLQ7Z5K2 1190 aa26.37■■□□□ 1.81
UBXN11-208ENST00000421827 C1orf167Q5SNV9 1468 aa26.36■■□□□ 1.81
UBXN11-208ENST00000421827 STAC3Q96MF2 364 aa26.36■■□□□ 1.81
UBXN11-208ENST00000421827 KDM2AQ9Y2K7 1162 aa26.36■■□□□ 1.81
UBXN11-208ENST00000421827 KNDC1Q76NI1 1749 aa26.36■■□□□ 1.81
UBXN11-208ENST00000421827 DHX57Q6P158 1386 aaKnown RBP26.35■■□□□ 1.81
UBXN11-208ENST00000421827 SIRT1Q96EB6 747 aa26.33■■□□□ 1.81
UBXN11-208ENST00000421827 PLEKHH1Q9ULM0 1364 aa26.33■■□□□ 1.8
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms