RNA–Protein interactions for RNA: ENST00000419378.5

HMGN1-205, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 2

Gene HMGN1, Length 850 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-205ENST00000419378 MYO5CQ9NQX4 1742 aa11.09□□□□□ -0.63
HMGN1-205ENST00000419378 FRMPD1Q5SYB0 1578 aa11.09□□□□□ -0.63
HMGN1-205ENST00000419378 LOC105371045A0A1W2PR82 267 aa11.08□□□□□ -0.64
HMGN1-205ENST00000419378 PLCH2O75038 1416 aa11.08□□□□□ -0.64
HMGN1-205ENST00000419378 AKNAQ7Z591 1439 aa11.08□□□□□ -0.64
HMGN1-205ENST00000419378 SMYD5Q6GMV2 418 aa11.07□□□□□ -0.64
HMGN1-205ENST00000419378 C3orf67Q6ZVT6 689 aa11.07□□□□□ -0.64
HMGN1-205ENST00000419378 MLLT3P42568 568 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-205ENST00000419378 RICTORQ6R327 1708 aa11.06□□□□□ -0.64
HMGN1-205ENST00000419378 DENND4BO75064 1496 aaPredicted RBP11.06□□□□□ -0.64
HMGN1-205ENST00000419378 RAPGEF3O95398 923 aa11.05□□□□□ -0.64
HMGN1-205ENST00000419378 LHX8Q68G74 356 aa11.05□□□□□ -0.64
HMGN1-205ENST00000419378 ADGRL1O94910 1474 aa11.05□□□□□ -0.64
HMGN1-205ENST00000419378 ARHGAP5Q13017 1502 aa11.04□□□□□ -0.64
HMGN1-205ENST00000419378 SPDYE16A6NNV3 312 aaPredicted RBP11.04□□□□□ -0.64
HMGN1-205ENST00000419378 PDIA6Q15084 440 aa11.04□□□□□ -0.64
HMGN1-205ENST00000419378 UPF1Q92900 1129 aaKnown RBP eCLIP11.04□□□□□ -0.64
HMGN1-205ENST00000419378 PREX2Q70Z35 1606 aa11.04□□□□□ -0.64
HMGN1-205ENST00000419378 KDM4FA0A1W2PPD8 638 aa11.03□□□□□ -0.64
HMGN1-205ENST00000419378 ZMYM4Q5VZL5 1548 aa11.03□□□□□ -0.64
HMGN1-205ENST00000419378 CDC42BPBQ9Y5S2 1711 aa11.02□□□□□ -0.65
HMGN1-205ENST00000419378 MAP3K9P80192 1104 aa11.02□□□□□ -0.65
HMGN1-205ENST00000419378 ZC3H15Q8WU90 426 aaKnown RBP11.02□□□□□ -0.65
HMGN1-205ENST00000419378 ARHGEF40Q8TER5 1519 aa11.02□□□□□ -0.65
HMGN1-205ENST00000419378 POGZQ7Z3K3 1410 aa11.01□□□□□ -0.65
HMGN1-205ENST00000419378 VPS8Q8N3P4 1428 aa11.01□□□□□ -0.65
HMGN1-205ENST00000419378 SCAPERQ9BY12 1400 aa11.01□□□□□ -0.65
HMGN1-205ENST00000419378 CDC42BPAQ5VT25 1732 aa11.01□□□□□ -0.65
HMGN1-205ENST00000419378 EFCAB2Q5VUJ9 269 aa11.01□□□□□ -0.65
HMGN1-205ENST00000419378 EHBP1L1Q8N3D4 1523 aa11□□□□□ -0.65
HMGN1-205ENST00000419378 OXER1Q8TDS5 423 aa11□□□□□ -0.65
HMGN1-205ENST00000419378 MTUS2Q5JR59 1369 aa11□□□□□ -0.65
HMGN1-205ENST00000419378 ABCC1P33527 1531 aa10.99□□□□□ -0.65
HMGN1-205ENST00000419378 RBM26Q5T8P6 1007 aaKnown RBP10.99□□□□□ -0.65
HMGN1-205ENST00000419378 ZFYVE16Q7Z3T8 1539 aa10.99□□□□□ -0.65
HMGN1-205ENST00000419378 TIAM1Q13009 1591 aa10.99□□□□□ -0.65
HMGN1-205ENST00000419378 EIF2AK3Q9NZJ5 1116 aaKnown RBP10.98□□□□□ -0.65
HMGN1-205ENST00000419378 ZNF518AQ6AHZ1 1483 aa10.97□□□□□ -0.65
HMGN1-205ENST00000419378 MAGI2Q86UL8 1455 aa10.97□□□□□ -0.65
HMGN1-205ENST00000419378 GPATCH8Q9UKJ3 1502 aaKnown RBP10.97□□□□□ -0.65
HMGN1-205ENST00000419378 KDM5CP41229 1560 aa10.97□□□□□ -0.65
HMGN1-205ENST00000419378 ITSN2Q9NZM3 1697 aa10.96□□□□□ -0.65
HMGN1-205ENST00000419378 ARHGEF12Q9NZN5 1544 aa10.96□□□□□ -0.65
HMGN1-205ENST00000419378 YEATS2Q9ULM3 1422 aa10.96□□□□□ -0.65
HMGN1-205ENST00000419378 SAMD9LQ8IVG5 1584 aa10.95□□□□□ -0.66
HMGN1-205ENST00000419378 CCNB3Q8WWL7 1395 aa10.95□□□□□ -0.66
HMGN1-205ENST00000419378 SUPT6HQ7KZ85 1726 aaKnown RBP10.94□□□□□ -0.66
HMGN1-205ENST00000419378 HECW2Q9P2P5 1572 aa10.94□□□□□ -0.66
HMGN1-205ENST00000419378 SYCP2Q9BX26 1530 aa10.94□□□□□ -0.66
HMGN1-205ENST00000419378 TRAPPC8Q9Y2L5 1435 aa10.93□□□□□ -0.66
HMGN1-205ENST00000419378 BCORL1Q5H9F3 1711 aa10.93□□□□□ -0.66
HMGN1-205ENST00000419378 SIGLEC1Q9BZZ2 1709 aa10.93□□□□□ -0.66
HMGN1-205ENST00000419378 GRXCR2A6NFK2 248 aa10.93□□□□□ -0.66
HMGN1-205ENST00000419378 MAP3K1Q13233 1512 aa10.93□□□□□ -0.66
HMGN1-205ENST00000419378 NCOA2Q15596 1464 aa10.93□□□□□ -0.66
HMGN1-205ENST00000419378 LRRC9Q6ZRR7 1453 aa10.93□□□□□ -0.66
HMGN1-205ENST00000419378 ADAMTSL3P82987 1691 aa10.92□□□□□ -0.66
HMGN1-205ENST00000419378 TBC1D12O60347 775 aa10.92□□□□□ -0.66
HMGN1-205ENST00000419378 AFAP1Q8N556 730 aa10.92□□□□□ -0.66
HMGN1-205ENST00000419378 ABCA6Q8N139 1617 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 DIP2CQ9Y2E4 1556 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 ZMYND10O75800 440 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 GPIHBP1Q8IV16 184 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 PTCD2Q8WV60 388 aaKnown RBP10.91□□□□□ -0.66
HMGN1-205ENST00000419378 CFDP1Q9UEE9 299 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-205ENST00000419378 ZNF777Q9ULD5 760 aaPredicted RBP10.91□□□□□ -0.66
HMGN1-205ENST00000419378 ATP10AO60312 1499 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 PLEKHH2Q8IVE3 1493 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 MLH3Q9UHC1 1453 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 C9orf84Q5VXU9 1444 aa10.91□□□□□ -0.66
HMGN1-205ENST00000419378 ARID4BQ4LE39 1312 aaPredicted RBP10.9□□□□□ -0.66
HMGN1-205ENST00000419378 EVI5O60447 810 aa10.9□□□□□ -0.66
HMGN1-205ENST00000419378 POTEJP0CG39 1038 aa10.9□□□□□ -0.66
HMGN1-205ENST00000419378 MADDQ8WXG6 1647 aa10.9□□□□□ -0.66
HMGN1-205ENST00000419378 KIAA1107Q9UPP5 1409 aa10.9□□□□□ -0.66
HMGN1-205ENST00000419378 SLC34A2O95436 690 aa10.89□□□□□ -0.67
HMGN1-205ENST00000419378 DDX12PQ92771 950 aa10.89□□□□□ -0.67
HMGN1-205ENST00000419378 KIDINS220Q9ULH0 1771 aa10.88□□□□□ -0.67
HMGN1-205ENST00000419378 POTEB2H3BUK9 544 aa10.88□□□□□ -0.67
HMGN1-205ENST00000419378 SLC24A3Q9HC58 644 aa10.88□□□□□ -0.67
HMGN1-205ENST00000419378 REREQ9P2R6 1566 aa10.88□□□□□ -0.67
HMGN1-205ENST00000419378 INO80Q9ULG1 1556 aaPredicted RBP10.87□□□□□ -0.67
HMGN1-205ENST00000419378 PTGER2P43116 358 aa10.87□□□□□ -0.67
HMGN1-205ENST00000419378 PTPRMP28827 1452 aa10.87□□□□□ -0.67
HMGN1-205ENST00000419378 ZNF644Q9H582 1327 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-205ENST00000419378 ATP7AQ04656 1500 aa10.86□□□□□ -0.67
HMGN1-205ENST00000419378 HNRNPMP52272 730 aaKnown RBP eCLIP10.86□□□□□ -0.67
HMGN1-205ENST00000419378 KANK4Q5T7N3 995 aaPredicted RBP10.86□□□□□ -0.67
HMGN1-205ENST00000419378 MYT1LQ9UL68 1186 aa10.86□□□□□ -0.67
HMGN1-205ENST00000419378 CAMSAP2Q08AD1 1489 aa10.86□□□□□ -0.67
HMGN1-205ENST00000419378 MBD5Q9P267 1494 aa10.86□□□□□ -0.67
HMGN1-205ENST00000419378 RIMS1Q86UR5 1692 aaKnown RBP10.85□□□□□ -0.67
HMGN1-205ENST00000419378 ZNF316A6NFI3 1004 aaPredicted RBP10.85□□□□□ -0.67
HMGN1-205ENST00000419378 OSBPP22059 807 aa10.85□□□□□ -0.67
HMGN1-205ENST00000419378 BARGINQ6ZT62 677 aa10.85□□□□□ -0.67
HMGN1-205ENST00000419378 FER1L4A9Z1Z3 1794 aa10.85□□□□□ -0.67
HMGN1-205ENST00000419378 SPAG9O60271 1321 aaKnown RBP10.84□□□□□ -0.67
HMGN1-205ENST00000419378 AGLP35573 1532 aa10.84□□□□□ -0.67
HMGN1-205ENST00000419378 CCDC141Q6ZP82 1450 aa10.83□□□□□ -0.68
HMGN1-205ENST00000419378 MLECQ14165 292 aa10.83□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 115 ms