RNA–Protein interactions for RNA: ENST00000419308.6

FOXA2-202, Transcript of forkhead box A2, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene FOXA2, Length 2,422 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FOXA2-202ENST00000419308 EIF3AQ14152 1382 aaKnown RBP35.47■■■■□ 3.27
FOXA2-202ENST00000419308 MAP3K4Q9Y6R4 1608 aa35.47■■■■□ 3.27
FOXA2-202ENST00000419308 KNSTRNQ9Y448 316 aa35.47■■■■□ 3.27
FOXA2-202ENST00000419308 MYOM2P54296 1465 aa35.47■■■■□ 3.27
FOXA2-202ENST00000419308 PPRC1Q5VV67 1664 aaKnown RBP35.47■■■■□ 3.27
FOXA2-202ENST00000419308 KIF1BO60333 1816 aa35.46■■■■□ 3.27
FOXA2-202ENST00000419308 CCDC136Q96JN2 1154 aa35.45■■■■□ 3.27
FOXA2-202ENST00000419308 NPM1P06748 294 aaKnown RBP eCLIP35.44■■■■□ 3.26
FOXA2-202ENST00000419308 LMTK2Q8IWU2 1503 aa35.43■■■■□ 3.26
FOXA2-202ENST00000419308 AMER1Q5JTC6 1135 aaPredicted RBP35.43■■■■□ 3.26
FOXA2-202ENST00000419308 RCAN3Q9UKA8 241 aa35.42■■■■□ 3.26
FOXA2-202ENST00000419308 ABCA6Q8N139 1617 aa35.42■■■■□ 3.26
FOXA2-202ENST00000419308 RRP1P56182 461 aaKnown RBP35.42■■■■□ 3.26
FOXA2-202ENST00000419308 MYOM1P52179 1685 aa35.42■■■■□ 3.26
FOXA2-202ENST00000419308 CFAP70Q5T0N1 1121 aa35.41■■■■□ 3.26
FOXA2-202ENST00000419308 ADGRF5Q8IZF2 1346 aa35.41■■■■□ 3.26
FOXA2-202ENST00000419308 OSCARQ8IYS5 282 aa35.4■■■■□ 3.26
FOXA2-202ENST00000419308 IFT172Q9UG01 1749 aa35.4■■■■□ 3.26
FOXA2-202ENST00000419308 CDCA7LQ96GN5 454 aa35.38■■■■□ 3.25
FOXA2-202ENST00000419308 MROH2AA6NES4 1674 aa35.38■■■■□ 3.25
FOXA2-202ENST00000419308 CD109Q6YHK3 1445 aa35.38■■■■□ 3.25
FOXA2-202ENST00000419308 PPP2R1AP30153 589 aa35.37■■■■□ 3.25
FOXA2-202ENST00000419308 MSH5O43196 834 aa35.37■■■■□ 3.25
FOXA2-202ENST00000419308 POGZQ7Z3K3 1410 aa35.37■■■■□ 3.25
FOXA2-202ENST00000419308 ASXL1Q8IXJ9 1541 aa35.36■■■■□ 3.25
FOXA2-202ENST00000419308 CFAP74Q9C0B2 1584 aa35.36■■■■□ 3.25
FOXA2-202ENST00000419308 KDM5AP29375 1690 aaKnown RBP35.35■■■■□ 3.25
FOXA2-202ENST00000419308 NRXN1Q9ULB1 1477 aa35.33■■■■□ 3.25
FOXA2-202ENST00000419308 ADAMTS8Q9UP79 889 aa35.33■■■■□ 3.25
FOXA2-202ENST00000419308 MLH3Q9UHC1 1453 aa35.32■■■■□ 3.24
FOXA2-202ENST00000419308 FRMPD1Q5SYB0 1578 aa35.31■■■■□ 3.24
FOXA2-202ENST00000419308 NPC1L1Q9UHC9 1359 aa35.3■■■■□ 3.24
FOXA2-202ENST00000419308 ADGRB3O60242 1522 aa35.29■■■■□ 3.24
FOXA2-202ENST00000419308 ERVK-7P63135 1459 aa35.29■■■■□ 3.24
FOXA2-202ENST00000419308 SLC24A1O60721 1099 aa35.29■■■■□ 3.24
FOXA2-202ENST00000419308 HECW2Q9P2P5 1572 aa35.27■■■■□ 3.24
FOXA2-202ENST00000419308 NPATQ14207 1427 aa35.26■■■■□ 3.24
FOXA2-202ENST00000419308 PIK3C2GO75747 1445 aa35.25■■■■□ 3.23
FOXA2-202ENST00000419308 NOS1P29475 1434 aa35.24■■■■□ 3.23
FOXA2-202ENST00000419308 EXOC6Q8TAG9 804 aa35.24■■■■□ 3.23
FOXA2-202ENST00000419308 GGT6Q6P531 493 aa35.23■■■■□ 3.23
FOXA2-202ENST00000419308 WDR43Q15061 677 aaKnown RBP eCLIP35.22■■■■□ 3.23
FOXA2-202ENST00000419308 MYO3AQ8NEV4 1616 aa35.21■■■■□ 3.23
FOXA2-202ENST00000419308 CFAP65Q6ZU64 1925 aaKnown RBP35.2■■■■□ 3.23
FOXA2-202ENST00000419308 CHGAP10645 457 aaKnown RBP35.19■■■■□ 3.22
FOXA2-202ENST00000419308 SETBP1Q9Y6X0 1596 aa35.18■■■■□ 3.22
FOXA2-202ENST00000419308 SBNO2Q9Y2G9 1366 aa35.18■■■■□ 3.22
FOXA2-202ENST00000419308 PPLO60437 1756 aa35.16■■■■□ 3.22
FOXA2-202ENST00000419308 ABCC3O15438 1527 aa35.14■■■■□ 3.22
FOXA2-202ENST00000419308 PLEKHH1Q9ULM0 1364 aa35.14■■■■□ 3.22
FOXA2-202ENST00000419308 CARD14Q9BXL6 1004 aa35.12■■■■□ 3.21
FOXA2-202ENST00000419308 NEO1Q92859 1461 aa35.11■■■■□ 3.21
FOXA2-202ENST00000419308 CENPJQ9HC77 1338 aaPredicted RBP35.11■■■■□ 3.21
FOXA2-202ENST00000419308 C14orf93Q9H972 538 aaKnown RBP35.1■■■■□ 3.21
FOXA2-202ENST00000419308 ZNF521Q96K83 1311 aa35.09■■■■□ 3.21
FOXA2-202ENST00000419308 RAPGEF3O95398 923 aa35.08■■■■□ 3.21
FOXA2-202ENST00000419308 PLIN1O60240 522 aa35.07■■■■□ 3.21
FOXA2-202ENST00000419308 ADGRB1O14514 1584 aa35.06■■■■□ 3.2
FOXA2-202ENST00000419308 CAMSAP1Q5T5Y3 1602 aa35.06■■■■□ 3.2
FOXA2-202ENST00000419308 RPGRIP1LQ68CZ1 1315 aa35.05■■■■□ 3.2
FOXA2-202ENST00000419308 TRAK1Q9UPV9 953 aa35.05■■■■□ 3.2
FOXA2-202ENST00000419308 SIGLEC1Q9BZZ2 1709 aa35.03■■■■□ 3.2
FOXA2-202ENST00000419308 DUSP27Q5VZP5 1158 aa35.03■■■■□ 3.2
FOXA2-202ENST00000419308 ZC3H13Q5T200 1668 aaKnown RBP35.02■■■■□ 3.2
FOXA2-202ENST00000419308 DIP2CQ9Y2E4 1556 aa35■■■■□ 3.19
FOXA2-202ENST00000419308 QRICH2Q9H0J4 1663 aa35■■■■□ 3.19
FOXA2-202ENST00000419308 GOLGA2Q08379 1002 aa35■■■■□ 3.19
FOXA2-202ENST00000419308 TMEM132EQ6IEE7 984 aa34.98■■■■□ 3.19
FOXA2-202ENST00000419308 PIK3C2BO00750 1634 aa34.97■■■■□ 3.19
FOXA2-202ENST00000419308 ERICH6Q7L0X2 663 aa34.97■■■■□ 3.19
FOXA2-202ENST00000419308 CCDC146Q8IYE0 955 aa34.97■■■■□ 3.19
FOXA2-202ENST00000419308 CRBNQ96SW2 442 aa34.96■■■■□ 3.19
FOXA2-202ENST00000419308 RICTORQ6R327 1708 aa34.93■■■■□ 3.18
FOXA2-202ENST00000419308 SLFN5Q08AF3 891 aa34.91■■■■□ 3.18
FOXA2-202ENST00000419308 NSD3Q9BZ95 1437 aa34.91■■■■□ 3.18
FOXA2-202ENST00000419308 APAF1O14727 1248 aa34.9■■■■□ 3.18
FOXA2-202ENST00000419308 SLC12A5Q9H2X9 1139 aa34.9■■■■□ 3.18
FOXA2-202ENST00000419308 NEXMIFQ5QGS0 1516 aa34.89■■■■□ 3.18
FOXA2-202ENST00000419308 ARHGAP31Q2M1Z3 1444 aa34.89■■■■□ 3.18
FOXA2-202ENST00000419308 C20orf194Q5TEA3 1177 aa34.89■■■■□ 3.18
FOXA2-202ENST00000419308 TCERG1O14776 1098 aaKnown RBP34.89■■■■□ 3.18
FOXA2-202ENST00000419308 GLI2P10070 1586 aa34.88■■■■□ 3.17
FOXA2-202ENST00000419308 POLR3AO14802 1390 aaPredicted RBP34.88■■■■□ 3.17
FOXA2-202ENST00000419308 TRMT2AQ8IZ69 625 aaKnown RBP34.87■■■■□ 3.17
FOXA2-202ENST00000419308 VGFO15240 615 aaPredicted RBP34.87■■■■□ 3.17
FOXA2-202ENST00000419308 NUTM2DQ5VT03 806 aaPredicted RBP34.86■■■■□ 3.17
FOXA2-202ENST00000419308 YEATS2Q9ULM3 1422 aa34.84■■■■□ 3.17
FOXA2-202ENST00000419308 SPINK5Q9NQ38 1064 aaPredicted RBP34.82■■■■□ 3.16
FOXA2-202ENST00000419308 MORC1Q86VD1 984 aa34.82■■■■□ 3.16
FOXA2-202ENST00000419308 ARHGEF28Q8N1W1 1705 aaKnown RBP34.82■■■■□ 3.16
FOXA2-202ENST00000419308 IDI1Q13907 227 aa34.81■■■■□ 3.16
FOXA2-202ENST00000419308 ANP32AP39687 249 aaKnown RBP34.79■■■■□ 3.16
FOXA2-202ENST00000419308 NGEFQ8N5V2 710 aa34.79■■■■□ 3.16
FOXA2-202ENST00000419308 USP32Q8NFA0 1604 aa34.78■■■■□ 3.16
FOXA2-202ENST00000419308 NKTRP30414 1462 aaKnown RBP34.77■■■■□ 3.16
FOXA2-202ENST00000419308 PUS7Q96PZ0 661 aaKnown RBP34.76■■■■□ 3.16
FOXA2-202ENST00000419308 NOP58Q9Y2X3 529 aaKnown RBP34.76■■■■□ 3.16
FOXA2-202ENST00000419308 TULP4Q9NRJ4 1543 aa34.76■■■■□ 3.16
FOXA2-202ENST00000419308 MS4A1P11836 297 aa34.76■■■■□ 3.15
FOXA2-202ENST00000419308 SHPRHQ149N8 1683 aa34.75■■■■□ 3.15
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms