RNA–Protein interactions for RNA: ENST00000417268.3

SCAF8-203, Transcript of SR-related CTD associated factor 8, humanhuman

TSL 2 BASIC

Gene SCAF8, Length 4,944 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF8-203ENST00000417268 ABCA5Q8WWZ7 1642 aa16.26■□□□□ 0.19
SCAF8-203ENST00000417268 GOLGA2Q08379 1002 aa16.26■□□□□ 0.19
SCAF8-203ENST00000417268 PDE3BQ13370 1112 aa16.25■□□□□ 0.19
SCAF8-203ENST00000417268 CCDC146Q8IYE0 955 aa16.25■□□□□ 0.19
SCAF8-203ENST00000417268 CABP2Q9NPB3 220 aa16.25■□□□□ 0.19
SCAF8-203ENST00000417268 DHX29Q7Z478 1369 aaKnown RBP16.25■□□□□ 0.19
SCAF8-203ENST00000417268 TEX14Q8IWB6 1497 aa16.25■□□□□ 0.19
SCAF8-203ENST00000417268 PROSER2Q86WR7 435 aaPredicted RBP16.24■□□□□ 0.19
SCAF8-203ENST00000417268 PRAM1Q96QH2 718 aa16.24■□□□□ 0.19
SCAF8-203ENST00000417268 NBPF8Q3BBV2 869 aa16.23■□□□□ 0.19
SCAF8-203ENST00000417268 RCAN3Q9UKA8 241 aa16.22■□□□□ 0.19
SCAF8-203ENST00000417268 OS9Q13438 667 aaPredicted RBP16.22■□□□□ 0.19
SCAF8-203ENST00000417268 STK31Q9BXU1 1019 aa16.22■□□□□ 0.19
SCAF8-203ENST00000417268 PBRM1Q86U86 1689 aa16.21■□□□□ 0.19
SCAF8-203ENST00000417268 SLC26A8Q96RN1 970 aa16.2■□□□□ 0.18
SCAF8-203ENST00000417268 ABCC2Q92887 1545 aa16.2■□□□□ 0.18
SCAF8-203ENST00000417268 DIAPH1O60610 1272 aaKnown RBP16.2■□□□□ 0.18
SCAF8-203ENST00000417268 EVA1CP58658 441 aa16.2■□□□□ 0.18
SCAF8-203ENST00000417268 CASC1Q6TDU7 716 aa16.2■□□□□ 0.18
SCAF8-203ENST00000417268 SPRYD3Q8NCJ5 442 aa16.2■□□□□ 0.18
SCAF8-203ENST00000417268 DISP1Q96F81 1524 aa16.19■□□□□ 0.18
SCAF8-203ENST00000417268 TARBP1Q13395 1621 aaKnown RBP16.18■□□□□ 0.18
SCAF8-203ENST00000417268 USP35Q9P2H5 1018 aa16.18■□□□□ 0.18
SCAF8-203ENST00000417268 HSP90AB1P08238 724 aaKnown RBP16.17■□□□□ 0.18
SCAF8-203ENST00000417268 SLKQ9H2G2 1235 aaPredicted RBP16.17■□□□□ 0.18
SCAF8-203ENST00000417268 GPRASP1Q5JY77 1395 aa16.17■□□□□ 0.18
SCAF8-203ENST00000417268 GGNBP2Q9H3C7 697 aa16.17■□□□□ 0.18
SCAF8-203ENST00000417268 WASHC2AQ641Q2 1341 aa16.16■□□□□ 0.18
SCAF8-203ENST00000417268 GZF1Q9H116 711 aaPredicted RBP16.16■□□□□ 0.18
SCAF8-203ENST00000417268 MSNP26038 577 aaKnown RBP16.16■□□□□ 0.18
SCAF8-203ENST00000417268 NLRP6P59044 892 aa16.16■□□□□ 0.18
SCAF8-203ENST00000417268 NGEFQ8N5V2 710 aa16.16■□□□□ 0.18
SCAF8-203ENST00000417268 ZNF518AQ6AHZ1 1483 aa16.15■□□□□ 0.18
SCAF8-203ENST00000417268 C1orf141Q5JVX7 400 aa16.15■□□□□ 0.18
SCAF8-203ENST00000417268 CNTLNQ9NXG0 1405 aa16.15■□□□□ 0.18
SCAF8-203ENST00000417268 IDI1Q13907 227 aa16.15■□□□□ 0.18
SCAF8-203ENST00000417268 SMC4Q9NTJ3 1288 aa16.15■□□□□ 0.18
SCAF8-203ENST00000417268 FBXO31Q5XUX0 539 aaPredicted RBP16.14■□□□□ 0.17
SCAF8-203ENST00000417268 RRP7AQ9Y3A4 280 aaKnown RBP16.14■□□□□ 0.17
SCAF8-203ENST00000417268 ZNF330Q9Y3S2 320 aaPredicted RBP16.14■□□□□ 0.17
SCAF8-203ENST00000417268 ESCO1Q5FWF5 840 aa16.14■□□□□ 0.17
SCAF8-203ENST00000417268 TPRNQ4KMQ1 711 aa16.14■□□□□ 0.17
SCAF8-203ENST00000417268 HSCBQ8IWL3 235 aa16.14■□□□□ 0.17
SCAF8-203ENST00000417268 ITSN2Q9NZM3 1697 aa16.14■□□□□ 0.17
SCAF8-203ENST00000417268 CDK19Q9BWU1 502 aa16.13■□□□□ 0.17
SCAF8-203ENST00000417268 CEP170Q5SW79 1584 aa16.13■□□□□ 0.17
SCAF8-203ENST00000417268 ZNF692Q9BU19 519 aaPredicted RBP16.13■□□□□ 0.17
SCAF8-203ENST00000417268 HDAC5Q9UQL6 1122 aa16.12■□□□□ 0.17
SCAF8-203ENST00000417268 TEFQ10587 303 aa16.12■□□□□ 0.17
SCAF8-203ENST00000417268 CEBPAP49715 358 aaPredicted RBP16.11■□□□□ 0.17
SCAF8-203ENST00000417268 KDM5BQ9UGL1 1544 aa16.11■□□□□ 0.17
SCAF8-203ENST00000417268 SYCP2Q9BX26 1530 aa16.11■□□□□ 0.17
SCAF8-203ENST00000417268 A2MP01023 1474 aa16.11■□□□□ 0.17
SCAF8-203ENST00000417268 APAF1O14727 1248 aa16.11■□□□□ 0.17
SCAF8-203ENST00000417268 PLCB2Q00722 1185 aa16.11■□□□□ 0.17
SCAF8-203ENST00000417268 RSPH6AQ9H0K4 717 aa16.11■□□□□ 0.17
SCAF8-203ENST00000417268 SLC12A5Q9H2X9 1139 aa16.11■□□□□ 0.17
SCAF8-203ENST00000417268 RTEL1-TNFRSF6BF6WH68 1400 aa16.1■□□□□ 0.17
SCAF8-203ENST00000417268 ITPRIPQ8IWB1 547 aa16.1■□□□□ 0.17
SCAF8-203ENST00000417268 GSE1Q14687 1217 aa16.1■□□□□ 0.17
SCAF8-203ENST00000417268 ABTB2Q8N961 1025 aa16.1■□□□□ 0.17
SCAF8-203ENST00000417268 PMFBP1Q8TBY8 1022 aa16.09■□□□□ 0.17
SCAF8-203ENST00000417268 ABCC10Q5T3U5 1492 aa16.09■□□□□ 0.17
SCAF8-203ENST00000417268 E9PSI1 815 aa16.09■□□□□ 0.17
SCAF8-203ENST00000417268 CABP1Q9NZU7 370 aa16.09■□□□□ 0.17
SCAF8-203ENST00000417268 TRAPPC8Q9Y2L5 1435 aa16.09■□□□□ 0.17
SCAF8-203ENST00000417268 DUOX2Q9NRD8 1548 aa16.09■□□□□ 0.17
SCAF8-203ENST00000417268 ATAD2Q6PL18 1390 aa16.08■□□□□ 0.17
SCAF8-203ENST00000417268 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
SCAF8-203ENST00000417268 NUTM2GQ5VZR2 741 aa16.08■□□□□ 0.16
SCAF8-203ENST00000417268 GOLGA6L3A6NEY3 463 aa16.08■□□□□ 0.16
SCAF8-203ENST00000417268 RUNDC1Q96C34 613 aa16.07■□□□□ 0.16
SCAF8-203ENST00000417268 PDE4AP27815 886 aa16.06■□□□□ 0.16
SCAF8-203ENST00000417268 MTHFSP49914 203 aa16.06■□□□□ 0.16
SCAF8-203ENST00000417268 RAPGEF4Q8WZA2 1011 aa16.06■□□□□ 0.16
SCAF8-203ENST00000417268 RWDD1Q9H446 243 aaPredicted RBP16.06■□□□□ 0.16
SCAF8-203ENST00000417268 HSP90AA2PQ14568 343 aaPredicted RBP16.06■□□□□ 0.16
SCAF8-203ENST00000417268 PTPRKQ15262 1439 aa16.05■□□□□ 0.16
SCAF8-203ENST00000417268 ARID3AQ99856 593 aa16.05■□□□□ 0.16
SCAF8-203ENST00000417268 ZBED9Q6R2W3 1325 aa16.05■□□□□ 0.16
SCAF8-203ENST00000417268 RIPK4P57078 832 aa16.05■□□□□ 0.16
SCAF8-203ENST00000417268 VSIG10Q8N0Z9 540 aa16.05■□□□□ 0.16
SCAF8-203ENST00000417268 TCOF1Q13428 1488 aaKnown RBP16.05■□□□□ 0.16
SCAF8-203ENST00000417268 CCDC61Q9Y6R9 512 aa16.05■□□□□ 0.16
SCAF8-203ENST00000417268 SLC4A3P48751 1232 aa16.04■□□□□ 0.16
SCAF8-203ENST00000417268 BRD4O60885 1362 aaPredicted RBP16.04■□□□□ 0.16
SCAF8-203ENST00000417268 NLRP2Q9NX02 1062 aa16.04■□□□□ 0.16
SCAF8-203ENST00000417268 ADGRF5Q8IZF2 1346 aa16.03■□□□□ 0.16
SCAF8-203ENST00000417268 TNRQ92752 1358 aa16.03■□□□□ 0.16
SCAF8-203ENST00000417268 MEX3CQ5U5Q3 659 aaKnown RBP16.03■□□□□ 0.16
SCAF8-203ENST00000417268 SLC4A10Q6U841 1118 aa16.03■□□□□ 0.16
SCAF8-203ENST00000417268 CLUAP1Q96AJ1 413 aa16.03■□□□□ 0.16
SCAF8-203ENST00000417268 RPRD2Q5VT52 1461 aaKnown RBP16.03■□□□□ 0.16
SCAF8-203ENST00000417268 TTC5Q8N0Z6 440 aa16.02■□□□□ 0.16
SCAF8-203ENST00000417268 FAM135AQ9P2D6 1515 aa16.02■□□□□ 0.16
SCAF8-203ENST00000417268 SAMD9Q5K651 1589 aa16.02■□□□□ 0.16
SCAF8-203ENST00000417268 ELL2O00472 640 aaPredicted RBP16.02■□□□□ 0.16
SCAF8-203ENST00000417268 CFAP43Q8NDM7 1665 aa16.01■□□□□ 0.15
SCAF8-203ENST00000417268 HMMRO75330 724 aa16.01■□□□□ 0.15
SCAF8-203ENST00000417268 ANO8Q9HCE9 1232 aaPredicted RBP16.01■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms