RNA–Protein interactions for RNA: ENST00000415828.5

CSTF1-202, Transcript of cleavage stimulation factor subunit 1, humanhuman

TSL 2

Gene CSTF1, Length 1,236 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF1-202ENST00000415828 SMARCA4P51532 1647 aa10.64□□□□□ -0.71
CSTF1-202ENST00000415828 NUDT18Q6ZVK8 323 aa10.63□□□□□ -0.71
CSTF1-202ENST00000415828 LRCH3Q96II8 777 aa10.63□□□□□ -0.71
CSTF1-202ENST00000415828 WBP1LQ9NX94 342 aa10.63□□□□□ -0.71
CSTF1-202ENST00000415828 ERCC6L2Q5T890 1561 aa10.62□□□□□ -0.71
CSTF1-202ENST00000415828 HPS5Q9UPZ3 1129 aa10.61□□□□□ -0.71
CSTF1-202ENST00000415828 KIF13AQ9H1H9 1805 aa10.61□□□□□ -0.71
CSTF1-202ENST00000415828 NUTM2FA1L443 756 aa10.6□□□□□ -0.71
CSTF1-202ENST00000415828 SAMD7Q7Z3H4 446 aa10.6□□□□□ -0.71
CSTF1-202ENST00000415828 TTC13Q8NBP0 860 aa10.6□□□□□ -0.71
CSTF1-202ENST00000415828 PTGDRQ13258 359 aa10.59□□□□□ -0.71
CSTF1-202ENST00000415828 FBXO41Q8TF61 875 aa10.59□□□□□ -0.71
CSTF1-202ENST00000415828 TSR3Q9UJK0 312 aaKnown RBP10.59□□□□□ -0.71
CSTF1-202ENST00000415828 BAZ1BQ9UIG0 1483 aaKnown RBP10.59□□□□□ -0.71
CSTF1-202ENST00000415828 HECW2Q9P2P5 1572 aa10.59□□□□□ -0.71
CSTF1-202ENST00000415828 TESPA1A2RU30 521 aaPredicted RBP10.56□□□□□ -0.72
CSTF1-202ENST00000415828 NYAP1Q6ZVC0 841 aa10.56□□□□□ -0.72
CSTF1-202ENST00000415828 ZNF608Q9ULD9 1512 aaPredicted RBP10.55□□□□□ -0.72
CSTF1-202ENST00000415828 HDGFP51858 240 aaKnown RBP10.54□□□□□ -0.72
CSTF1-202ENST00000415828 PPP4CP60510 307 aa10.54□□□□□ -0.72
CSTF1-202ENST00000415828 RBM26Q5T8P6 1007 aaKnown RBP10.54□□□□□ -0.72
CSTF1-202ENST00000415828 CEP164Q9UPV0 1460 aa10.54□□□□□ -0.72
CSTF1-202ENST00000415828 RNF40O75150 1001 aa10.53□□□□□ -0.72
CSTF1-202ENST00000415828 SMYD5Q6GMV2 418 aa10.53□□□□□ -0.72
CSTF1-202ENST00000415828 RSF1Q96T23 1441 aaPredicted RBP10.52□□□□□ -0.73
CSTF1-202ENST00000415828 IFFO2Q5TF58 517 aa10.52□□□□□ -0.73
CSTF1-202ENST00000415828 EYA1Q99502 592 aa10.52□□□□□ -0.73
CSTF1-202ENST00000415828 TULP1O00294 542 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-202ENST00000415828 FCHSD2O94868 740 aa10.51□□□□□ -0.73
CSTF1-202ENST00000415828 ITGBL1O95965 494 aaPredicted RBP10.51□□□□□ -0.73
CSTF1-202ENST00000415828 BCANQ96GW7 911 aa10.51□□□□□ -0.73
CSTF1-202ENST00000415828 URB2Q14146 1524 aaKnown RBP10.5□□□□□ -0.73
CSTF1-202ENST00000415828 FAM161AQ3B820 660 aa10.5□□□□□ -0.73
CSTF1-202ENST00000415828 SWT1Q5T5J6 900 aaKnown RBP10.5□□□□□ -0.73
CSTF1-202ENST00000415828 CADPSQ9ULU8 1353 aa10.5□□□□□ -0.73
CSTF1-202ENST00000415828 ADGRG1Q9Y653 693 aa10.48□□□□□ -0.73
CSTF1-202ENST00000415828 EIF4G3O43432 1585 aaKnown RBP10.47□□□□□ -0.73
CSTF1-202ENST00000415828 A0A0G2JS52 829 aa10.46□□□□□ -0.73
CSTF1-202ENST00000415828 KCNC4Q03721 635 aa10.46□□□□□ -0.73
CSTF1-202ENST00000415828 RBM46Q8TBY0 533 aaKnown RBP10.46□□□□□ -0.73
CSTF1-202ENST00000415828 SLF2Q8IX21 1173 aa10.45□□□□□ -0.74
CSTF1-202ENST00000415828 FANCD2Q9BXW9 1451 aa10.44□□□□□ -0.74
CSTF1-202ENST00000415828 HIC1Q14526 733 aa10.44□□□□□ -0.74
CSTF1-202ENST00000415828 DNAJB2P25686 324 aa10.43□□□□□ -0.74
CSTF1-202ENST00000415828 APLP1P51693 650 aa10.43□□□□□ -0.74
CSTF1-202ENST00000415828 FECHP22830 423 aa10.42□□□□□ -0.74
CSTF1-202ENST00000415828 PEG3Q9GZU2 1588 aa10.41□□□□□ -0.74
CSTF1-202ENST00000415828 RCCD1A6NED2 376 aa10.41□□□□□ -0.74
CSTF1-202ENST00000415828 SLC4A3P48751 1232 aa10.41□□□□□ -0.74
CSTF1-202ENST00000415828 TJAP1Q5JTD0 557 aa10.41□□□□□ -0.74
CSTF1-202ENST00000415828 DISP3Q9P2K9 1392 aa10.4□□□□□ -0.74
CSTF1-202ENST00000415828 CLASP1Q7Z460 1538 aa10.4□□□□□ -0.74
CSTF1-202ENST00000415828 GPR37O15354 613 aa10.4□□□□□ -0.74
CSTF1-202ENST00000415828 NECTIN2Q92692 538 aa10.4□□□□□ -0.74
CSTF1-202ENST00000415828 MTRQ99707 1265 aa10.4□□□□□ -0.74
CSTF1-202ENST00000415828 TMEM134Q9H6X4 195 aa10.4□□□□□ -0.74
CSTF1-202ENST00000415828 GNPATO15228 680 aa10.39□□□□□ -0.75
CSTF1-202ENST00000415828 LMOD2Q6P5Q4 547 aa10.39□□□□□ -0.75
CSTF1-202ENST00000415828 DHX30Q7L2E3 1194 aaKnown RBP eCLIP10.39□□□□□ -0.75
CSTF1-202ENST00000415828 GPIHBP1Q8IV16 184 aa10.38□□□□□ -0.75
CSTF1-202ENST00000415828 PXYLP1Q8TE99 480 aa10.38□□□□□ -0.75
CSTF1-202ENST00000415828 SYNJ2O15056 1496 aa10.37□□□□□ -0.75
CSTF1-202ENST00000415828 OATP04181 439 aa10.37□□□□□ -0.75
CSTF1-202ENST00000415828 IL21Q9HBE4 155 aa10.37□□□□□ -0.75
CSTF1-202ENST00000415828 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP10.36□□□□□ -0.75
CSTF1-202ENST00000415828 METTL3Q86U44 580 aaKnown RBP10.36□□□□□ -0.75
CSTF1-202ENST00000415828 ZNF516Q92618 1163 aa10.36□□□□□ -0.75
CSTF1-202ENST00000415828 RGS20O76081 388 aa10.35□□□□□ -0.75
CSTF1-202ENST00000415828 TSPOAP1O95153 1857 aa10.34□□□□□ -0.75
CSTF1-202ENST00000415828 KDM6BO15054 1643 aa10.34□□□□□ -0.75
CSTF1-202ENST00000415828 COPS2P61201 443 aa10.34□□□□□ -0.75
CSTF1-202ENST00000415828 ADGRL1O94910 1474 aa10.34□□□□□ -0.75
CSTF1-202ENST00000415828 IFT140Q96RY7 1462 aa10.33□□□□□ -0.76
CSTF1-202ENST00000415828 GAPVD1Q14C86 1478 aa10.31□□□□□ -0.76
CSTF1-202ENST00000415828 PRR14Q9BWN1 585 aa10.31□□□□□ -0.76
CSTF1-202ENST00000415828 PCDHB3Q9Y5E6 796 aa10.31□□□□□ -0.76
CSTF1-202ENST00000415828 CFHP08603 1231 aa10.3□□□□□ -0.76
CSTF1-202ENST00000415828 SLC10A3P09131 477 aa10.3□□□□□ -0.76
CSTF1-202ENST00000415828 NLRP7Q8WX94 980 aa10.3□□□□□ -0.76
CSTF1-202ENST00000415828 SPATA31D1Q6ZQQ2 1576 aa10.3□□□□□ -0.76
CSTF1-202ENST00000415828 NKX2-3Q8TAU0 364 aa10.29□□□□□ -0.76
CSTF1-202ENST00000415828 AQRO60306 1485 aaKnown RBP eCLIP10.29□□□□□ -0.763e-8■■■■■ 29
CSTF1-202ENST00000415828 KMT5BQ4FZB7 885 aa10.28□□□□□ -0.76
CSTF1-202ENST00000415828 BLOC1S3Q6QNY0 202 aa10.28□□□□□ -0.76
CSTF1-202ENST00000415828 PPP1R18Q6NYC8 613 aa10.27□□□□□ -0.77
CSTF1-202ENST00000415828 PHOX2BQ99453 314 aa10.27□□□□□ -0.77
CSTF1-202ENST00000415828 ACTN4O43707 911 aaKnown RBP10.26□□□□□ -0.77
CSTF1-202ENST00000415828 ZPR1O75312 459 aa10.26□□□□□ -0.77
CSTF1-202ENST00000415828 PRDM2Q13029 1718 aa10.26□□□□□ -0.77
CSTF1-202ENST00000415828 ZC3H15Q8WU90 426 aaKnown RBP10.25□□□□□ -0.77
CSTF1-202ENST00000415828 DAXXQ9UER7 740 aaPredicted RBP10.24□□□□□ -0.77
CSTF1-202ENST00000415828 SYNJ1O43426 1573 aa10.23□□□□□ -0.77
CSTF1-202ENST00000415828 TARBP1Q13395 1621 aaKnown RBP10.23□□□□□ -0.77
CSTF1-202ENST00000415828 RSPH4AQ5TD94 716 aa10.23□□□□□ -0.77
CSTF1-202ENST00000415828 RDH13Q8NBN7 331 aa10.23□□□□□ -0.77
CSTF1-202ENST00000415828 DDX11L8A8MPP1 907 aa10.22□□□□□ -0.77
CSTF1-202ENST00000415828 EIF4ENIF1Q9NRA8 985 aaKnown RBP10.22□□□□□ -0.77
CSTF1-202ENST00000415828 TLL1O43897 1013 aa10.21□□□□□ -0.77
CSTF1-202ENST00000415828 MAP2K5Q13163 448 aa10.21□□□□□ -0.77
CSTF1-202ENST00000415828 IRX2Q9BZI1 471 aaPredicted RBP10.21□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms