RNA–Protein interactions for RNA: ENST00000415055.2

PTPRK-210, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

TSL 5

Gene PTPRK, Length 782 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-210ENST00000415055 FANCD2Q9BXW9 1451 aa8.71□□□□□ -1.01
PTPRK-210ENST00000415055 CYB5RLQ6IPT4 315 aa8.71□□□□□ -1.02
PTPRK-210ENST00000415055 SAMD7Q7Z3H4 446 aa8.71□□□□□ -1.02
PTPRK-210ENST00000415055 IRX2Q9BZI1 471 aaPredicted RBP8.71□□□□□ -1.02
PTPRK-210ENST00000415055 CDHR5Q9HBB8 845 aa8.71□□□□□ -1.02
PTPRK-210ENST00000415055 RBM27Q9P2N5 1060 aaKnown RBP8.71□□□□□ -1.02
PTPRK-210ENST00000415055 PNMA3Q9UL41 463 aa8.71□□□□□ -1.02
PTPRK-210ENST00000415055 ARHGEF11O15085 1522 aa8.7□□□□□ -1.02
PTPRK-210ENST00000415055 C3orf80F5H4A9 247 aa8.69□□□□□ -1.02
PTPRK-210ENST00000415055 NUDT18Q6ZVK8 323 aa8.68□□□□□ -1.02
PTPRK-210ENST00000415055 WIZO95785 1651 aa8.68□□□□□ -1.02
PTPRK-210ENST00000415055 HDGFP51858 240 aaKnown RBP8.66□□□□□ -1.02
PTPRK-210ENST00000415055 TTC13Q8NBP0 860 aa8.65□□□□□ -1.02
PTPRK-210ENST00000415055 ARHGEF1Q92888 912 aaKnown RBP8.65□□□□□ -1.02
PTPRK-210ENST00000415055 NPDC1Q9NQX5 325 aaPredicted RBP8.65□□□□□ -1.02
PTPRK-210ENST00000415055 URB2Q14146 1524 aaKnown RBP8.64□□□□□ -1.03
PTPRK-210ENST00000415055 TJAP1Q5JTD0 557 aa8.63□□□□□ -1.03
PTPRK-210ENST00000415055 PADI6Q6TGC4 694 aa8.63□□□□□ -1.03
PTPRK-210ENST00000415055 RNF40O75150 1001 aa8.62□□□□□ -1.03
PTPRK-210ENST00000415055 CHD1O14646 1710 aa8.61□□□□□ -1.03
PTPRK-210ENST00000415055 NECTIN2Q92692 538 aa8.61□□□□□ -1.03
PTPRK-210ENST00000415055 MTRQ99707 1265 aa8.61□□□□□ -1.03
PTPRK-210ENST00000415055 IL21Q9HBE4 155 aa8.61□□□□□ -1.03
PTPRK-210ENST00000415055 ZNF608Q9ULD9 1512 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-210ENST00000415055 MLLT3P42568 568 aaPredicted RBP8.6□□□□□ -1.03
PTPRK-210ENST00000415055 KCNV2Q8TDN2 545 aa8.6□□□□□ -1.03
PTPRK-210ENST00000415055 CFTRP13569 1480 aa8.59□□□□□ -1.03
PTPRK-210ENST00000415055 SWT1Q5T5J6 900 aaKnown RBP8.59□□□□□ -1.03
PTPRK-210ENST00000415055 SLF2Q8IX21 1173 aa8.59□□□□□ -1.03
PTPRK-210ENST00000415055 PRDM2Q13029 1718 aa8.59□□□□□ -1.03
PTPRK-210ENST00000415055 ARAP1Q96P48 1450 aa8.58□□□□□ -1.04
PTPRK-210ENST00000415055 APLP1P51693 650 aa8.58□□□□□ -1.04
PTPRK-210ENST00000415055 SLC4A3P48751 1232 aa8.57□□□□□ -1.04
PTPRK-210ENST00000415055 EYA1Q99502 592 aa8.57□□□□□ -1.04
PTPRK-210ENST00000415055 IFT140Q96RY7 1462 aa8.57□□□□□ -1.04
PTPRK-210ENST00000415055 EIF4G3O43432 1585 aaKnown RBP8.56□□□□□ -1.04
PTPRK-210ENST00000415055 PRKCSHP14314 528 aaPredicted RBP8.55□□□□□ -1.04
PTPRK-210ENST00000415055 PTGDRQ13258 359 aa8.55□□□□□ -1.04
PTPRK-210ENST00000415055 PPP1R18Q6NYC8 613 aa8.54□□□□□ -1.04
PTPRK-210ENST00000415055 P3H3Q8IVL6 736 aa8.54□□□□□ -1.04
PTPRK-210ENST00000415055 ZNF516Q92618 1163 aa8.54□□□□□ -1.04
PTPRK-210ENST00000415055 TPRNQ4KMQ1 711 aa8.53□□□□□ -1.04
PTPRK-210ENST00000415055 Q6ZNB5 142 aa8.53□□□□□ -1.04
PTPRK-210ENST00000415055 LAPTM4AQ15012 233 aa8.52□□□□□ -1.05
PTPRK-210ENST00000415055 PRKD2Q9BZL6 878 aa8.52□□□□□ -1.05
PTPRK-210ENST00000415055 DNAJB2P25686 324 aa8.51□□□□□ -1.05
PTPRK-210ENST00000415055 COPS2P61201 443 aa8.51□□□□□ -1.05
PTPRK-210ENST00000415055 RBM46Q8TBY0 533 aaKnown RBP8.51□□□□□ -1.05
PTPRK-210ENST00000415055 PRR14Q9BWN1 585 aa8.51□□□□□ -1.05
PTPRK-210ENST00000415055 EIF4ENIF1Q9NRA8 985 aaKnown RBP8.51□□□□□ -1.05
PTPRK-210ENST00000415055 TOPBP1Q92547 1522 aa8.5□□□□□ -1.05
PTPRK-210ENST00000415055 NUTM2FA1L443 756 aa8.5□□□□□ -1.05
PTPRK-210ENST00000415055 NKX2-3Q8TAU0 364 aa8.5□□□□□ -1.05
PTPRK-210ENST00000415055 RSF1Q96T23 1441 aaPredicted RBP8.5□□□□□ -1.05
PTPRK-210ENST00000415055 AQRO60306 1485 aaKnown RBP eCLIP8.5□□□□□ -1.05
PTPRK-210ENST00000415055 TOP2AP11388 1531 aaKnown RBP8.49□□□□□ -1.05
PTPRK-210ENST00000415055 ADGRG1Q9Y653 693 aa8.49□□□□□ -1.05
PTPRK-210ENST00000415055 V9GY48 417 aaPredicted RBP8.49□□□□□ -1.05
PTPRK-210ENST00000415055 GFRA3O60609 400 aa8.48□□□□□ -1.05
PTPRK-210ENST00000415055 GGCXP38435 758 aa8.48□□□□□ -1.05
PTPRK-210ENST00000415055 TMEM134Q9H6X4 195 aa8.48□□□□□ -1.05
PTPRK-210ENST00000415055 ZPR1O75312 459 aa8.47□□□□□ -1.05
PTPRK-210ENST00000415055 FCHSD2O94868 740 aa8.47□□□□□ -1.05
PTPRK-210ENST00000415055 PCDHB3Q9Y5E6 796 aa8.47□□□□□ -1.05
PTPRK-210ENST00000415055 SEMA3EO15041 775 aa8.46□□□□□ -1.06
PTPRK-210ENST00000415055 ABCC8Q09428 1581 aa8.45□□□□□ -1.06
PTPRK-210ENST00000415055 DNMBPQ6XZF7 1577 aa8.45□□□□□ -1.06
PTPRK-210ENST00000415055 RCCD1A6NED2 376 aa8.45□□□□□ -1.06
PTPRK-210ENST00000415055 TMUB1Q9BVT8 246 aa8.45□□□□□ -1.06
PTPRK-210ENST00000415055 TARBP1Q13395 1621 aaKnown RBP8.44□□□□□ -1.06
PTPRK-210ENST00000415055 FAM161AQ3B820 660 aa8.44□□□□□ -1.06
PTPRK-210ENST00000415055 BLOC1S3Q6QNY0 202 aa8.44□□□□□ -1.06
PTPRK-210ENST00000415055 NRG2O14511 850 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-210ENST00000415055 KMT5BQ4FZB7 885 aa8.43□□□□□ -1.06
PTPRK-210ENST00000415055 CHMP7Q8WUX9 453 aaPredicted RBP8.43□□□□□ -1.06
PTPRK-210ENST00000415055 RPL17-C18orf32A0A0A6YYL6 228 aaKnown RBP8.42□□□□□ -1.06
PTPRK-210ENST00000415055 ACTN4O43707 911 aaKnown RBP8.42□□□□□ -1.06
PTPRK-210ENST00000415055 SYNJ1O43426 1573 aa8.42□□□□□ -1.06
PTPRK-210ENST00000415055 OATP04181 439 aa8.41□□□□□ -1.06
PTPRK-210ENST00000415055 CLASP1Q7Z460 1538 aa8.4□□□□□ -1.06
PTPRK-210ENST00000415055 CCDC88BA6NC98 1476 aa8.4□□□□□ -1.06
PTPRK-210ENST00000415055 SNAPC4Q5SXM2 1469 aa8.4□□□□□ -1.06
PTPRK-210ENST00000415055 TDRD9Q8NDG6 1382 aaKnown RBP8.4□□□□□ -1.06
PTPRK-210ENST00000415055 CFHP08603 1231 aa8.4□□□□□ -1.06
PTPRK-210ENST00000415055 HIC1Q14526 733 aa8.4□□□□□ -1.06
PTPRK-210ENST00000415055 SMYD5Q6GMV2 418 aa8.4□□□□□ -1.06
PTPRK-210ENST00000415055 TRAF7Q6Q0C0 670 aa8.4□□□□□ -1.06
PTPRK-210ENST00000415055 POLA1P09884 1462 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-210ENST00000415055 RAD54L2Q9Y4B4 1467 aa8.39□□□□□ -1.07
PTPRK-210ENST00000415055 TESPA1A2RU30 521 aaPredicted RBP8.39□□□□□ -1.07
PTPRK-210ENST00000415055 PXYLP1Q8TE99 480 aa8.39□□□□□ -1.07
PTPRK-210ENST00000415055 LCE2BO14633 110 aa8.38□□□□□ -1.07
PTPRK-210ENST00000415055 SLC10A3P09131 477 aa8.38□□□□□ -1.07
PTPRK-210ENST00000415055 PDZRN3Q9UPQ7 1066 aa8.38□□□□□ -1.07
PTPRK-210ENST00000415055 GAPVD1Q14C86 1478 aa8.38□□□□□ -1.07
PTPRK-210ENST00000415055 RNF223E7ERA6 249 aa8.37□□□□□ -1.07
PTPRK-210ENST00000415055 TLL1O43897 1013 aa8.37□□□□□ -1.07
PTPRK-210ENST00000415055 RBM26Q5T8P6 1007 aaKnown RBP8.37□□□□□ -1.07
PTPRK-210ENST00000415055 SOGA1O94964 1423 aa8.37□□□□□ -1.07
PTPRK-210ENST00000415055 RSPH4AQ5TD94 716 aa8.36□□□□□ -1.07
Retrieved 100 of 20,778 RNA–protein pairs in 65 ms