RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 L3MBTL2Q969R5 705 aa18.95■□□□□ 0.62
CNOT4-204ENST00000414802 ZFYVE9O95405 1425 aa18.95■□□□□ 0.62
CNOT4-204ENST00000414802 NUTM2DQ5VT03 806 aaPredicted RBP18.95■□□□□ 0.62
CNOT4-204ENST00000414802 SLIT1O75093 1534 aa18.95■□□□□ 0.62
CNOT4-204ENST00000414802 ARHGAP23Q9P227 1491 aa18.94■□□□□ 0.62
CNOT4-204ENST00000414802 IQGAP1P46940 1657 aa18.93■□□□□ 0.62
CNOT4-204ENST00000414802 TMEM2Q9UHN6 1383 aa18.92■□□□□ 0.62
CNOT4-204ENST00000414802 DCAF11Q8TEB1 546 aa18.92■□□□□ 0.62
CNOT4-204ENST00000414802 MYOM2P54296 1465 aa18.92■□□□□ 0.62
CNOT4-204ENST00000414802 KDM2AQ9Y2K7 1162 aa18.92■□□□□ 0.62
CNOT4-204ENST00000414802 THEMISQ8N1K5 641 aaPredicted RBP18.9■□□□□ 0.62
CNOT4-204ENST00000414802 HSPA2P54652 639 aa18.89■□□□□ 0.61
CNOT4-204ENST00000414802 NRXN3Q9Y4C0 1643 aa18.89■□□□□ 0.61
CNOT4-204ENST00000414802 STRCQ7RTU9 1775 aa18.89■□□□□ 0.61
CNOT4-204ENST00000414802 RPGRIP1LQ68CZ1 1315 aa18.88■□□□□ 0.61
CNOT4-204ENST00000414802 SCAF11Q99590 1463 aaKnown RBP18.88■□□□□ 0.61
CNOT4-204ENST00000414802 TRPM1Q7Z4N2 1603 aa18.87■□□□□ 0.61
CNOT4-204ENST00000414802 SETD1AO15047 1707 aaKnown RBP18.87■□□□□ 0.61
CNOT4-204ENST00000414802 ADGRF5Q8IZF2 1346 aa18.87■□□□□ 0.61
CNOT4-204ENST00000414802 NRXN1Q9ULB1 1477 aa18.86■□□□□ 0.61
CNOT4-204ENST00000414802 PPP1R15AO75807 674 aaPredicted RBP18.86■□□□□ 0.61
CNOT4-204ENST00000414802 LTKP29376 864 aa18.86■□□□□ 0.61
CNOT4-204ENST00000414802 PRAG1Q86YV5 1406 aa18.86■□□□□ 0.61
CNOT4-204ENST00000414802 KIAA1210Q9ULL0 1709 aa18.84■□□□□ 0.61
CNOT4-204ENST00000414802 TIMELESSQ9UNS1 1208 aa18.84■□□□□ 0.61
CNOT4-204ENST00000414802 LAMC1P11047 1609 aa18.84■□□□□ 0.61
CNOT4-204ENST00000414802 TXNDC2Q86VQ3 553 aa18.83■□□□□ 0.61
CNOT4-204ENST00000414802 PIK3C2GO75747 1445 aa18.83■□□□□ 0.61
CNOT4-204ENST00000414802 SETBP1Q9Y6X0 1596 aa18.83■□□□□ 0.6
CNOT4-204ENST00000414802 ABCF1Q8NE71 845 aaKnown RBP eCLIP18.82■□□□□ 0.6
CNOT4-204ENST00000414802 EID1Q9Y6B2 187 aa18.82■□□□□ 0.6
CNOT4-204ENST00000414802 NCKAP5LQ9HCH0 1330 aa18.82■□□□□ 0.6
CNOT4-204ENST00000414802 NBPF8Q3BBV2 869 aa18.82■□□□□ 0.6
CNOT4-204ENST00000414802 VGFO15240 615 aaPredicted RBP18.81■□□□□ 0.6
CNOT4-204ENST00000414802 PLEKHG1Q9ULL1 1385 aa18.8■□□□□ 0.6
CNOT4-204ENST00000414802 ALKQ9UM73 1620 aa18.8■□□□□ 0.6
CNOT4-204ENST00000414802 ANKLE2Q86XL3 938 aa18.79■□□□□ 0.6
CNOT4-204ENST00000414802 ASXL1Q8IXJ9 1541 aa18.79■□□□□ 0.6
CNOT4-204ENST00000414802 ZEB1P37275 1124 aaPredicted RBP18.79■□□□□ 0.6
CNOT4-204ENST00000414802 RALGAPBQ86X10 1494 aa18.78■□□□□ 0.6
CNOT4-204ENST00000414802 HDGFP51858 240 aaKnown RBP18.78■□□□□ 0.6
CNOT4-204ENST00000414802 NPHP4O75161 1426 aaPredicted RBP18.78■□□□□ 0.6
CNOT4-204ENST00000414802 BCANQ96GW7 911 aa18.77■□□□□ 0.6
CNOT4-204ENST00000414802 MED14O60244 1454 aa18.77■□□□□ 0.59
CNOT4-204ENST00000414802 DIP2AQ14689 1571 aa18.76■□□□□ 0.59
CNOT4-204ENST00000414802 ADAMTS13Q76LX8 1427 aa18.76■□□□□ 0.59
CNOT4-204ENST00000414802 STAC3Q96MF2 364 aa18.76■□□□□ 0.59
CNOT4-204ENST00000414802 CFAP70Q5T0N1 1121 aa18.75■□□□□ 0.59
CNOT4-204ENST00000414802 ADGRB1O14514 1584 aa18.73■□□□□ 0.59
CNOT4-204ENST00000414802 SLC26A8Q96RN1 970 aa18.73■□□□□ 0.59
CNOT4-204ENST00000414802 CHD2O14647 1828 aaKnown RBP18.72■□□□□ 0.59
CNOT4-204ENST00000414802 NBPF1Q3BBV0 1214 aa18.71■□□□□ 0.59
CNOT4-204ENST00000414802 ROCK2O75116 1388 aaKnown RBP18.7■□□□□ 0.58
CNOT4-204ENST00000414802 C14orf93Q9H972 538 aaKnown RBP18.7■□□□□ 0.58
CNOT4-204ENST00000414802 ARHGEF28Q8N1W1 1705 aaKnown RBP18.7■□□□□ 0.58
CNOT4-204ENST00000414802 KNDC1Q76NI1 1749 aa18.7■□□□□ 0.58
CNOT4-204ENST00000414802 STRCP1A6NGW2 1772 aa18.69■□□□□ 0.58
CNOT4-204ENST00000414802 METP08581 1390 aa18.69■□□□□ 0.58
CNOT4-204ENST00000414802 TMEM132EQ6IEE7 984 aa18.69■□□□□ 0.58
CNOT4-204ENST00000414802 XRN1Q8IZH2 1706 aaKnown RBP18.68■□□□□ 0.58
CNOT4-204ENST00000414802 GPRASP1Q5JY77 1395 aa18.66■□□□□ 0.58
CNOT4-204ENST00000414802 PTPRUQ92729 1446 aa18.65■□□□□ 0.58
CNOT4-204ENST00000414802 YTHDC2Q9H6S0 1430 aaKnown RBP18.64■□□□□ 0.57
CNOT4-204ENST00000414802 NWD1Q149M9 1564 aa18.63■□□□□ 0.57
CNOT4-204ENST00000414802 CARD11Q9BXL7 1154 aa18.63■□□□□ 0.57
CNOT4-204ENST00000414802 TBX22Q9Y458 520 aa18.63■□□□□ 0.57
CNOT4-204ENST00000414802 QRICH2Q9H0J4 1663 aa18.62■□□□□ 0.57
CNOT4-204ENST00000414802 CPS1P31327 1500 aa18.62■□□□□ 0.57
CNOT4-204ENST00000414802 STK26Q9P289 416 aa18.62■□□□□ 0.57
CNOT4-204ENST00000414802 LRPPRCP42704 1394 aaKnown RBP18.6■□□□□ 0.57
CNOT4-204ENST00000414802 USP47Q96K76 1375 aa18.59■□□□□ 0.57
CNOT4-204ENST00000414802 TRAK1Q9UPV9 953 aa18.59■□□□□ 0.57
CNOT4-204ENST00000414802 PIK3R4Q99570 1358 aa18.58■□□□□ 0.57
CNOT4-204ENST00000414802 DLC1Q96QB1 1528 aa18.58■□□□□ 0.56
CNOT4-204ENST00000414802 XIRP1Q702N8 1843 aaKnown RBP18.57■□□□□ 0.56
CNOT4-204ENST00000414802 TECPR2O15040 1411 aa18.57■□□□□ 0.56
CNOT4-204ENST00000414802 AMOTL2Q9Y2J4 779 aa18.56■□□□□ 0.56
CNOT4-204ENST00000414802 DMRT2Q9Y5R5 561 aa18.55■□□□□ 0.56
CNOT4-204ENST00000414802 ROBO2Q9HCK4 1378 aa18.55■□□□□ 0.56
CNOT4-204ENST00000414802 PTCH1Q13635 1447 aa18.55■□□□□ 0.56
CNOT4-204ENST00000414802 NALCNQ8IZF0 1738 aa18.54■□□□□ 0.56
CNOT4-204ENST00000414802 KCNA6P17658 529 aa18.54■□□□□ 0.56
CNOT4-204ENST00000414802 ABCC11Q96J66 1382 aa18.54■□□□□ 0.56
CNOT4-204ENST00000414802 ZNF335Q9H4Z2 1342 aaPredicted RBP18.54■□□□□ 0.56
CNOT4-204ENST00000414802 SIPA1L2Q9P2F8 1722 aaPredicted RBP18.54■□□□□ 0.56
CNOT4-204ENST00000414802 PLEKHH1Q9ULM0 1364 aa18.54■□□□□ 0.56
CNOT4-204ENST00000414802 NKTRP30414 1462 aaKnown RBP18.53■□□□□ 0.56
CNOT4-204ENST00000414802 EIF3AQ14152 1382 aaKnown RBP18.53■□□□□ 0.56
CNOT4-204ENST00000414802 HSPA5P11021 654 aaKnown RBP18.53■□□□□ 0.56
CNOT4-204ENST00000414802 HIRIP3Q9BW71 556 aaPredicted RBP18.53■□□□□ 0.56
CNOT4-204ENST00000414802 SAFB2Q14151 953 aaKnown RBP eCLIP18.52■□□□□ 0.56
CNOT4-204ENST00000414802 EIF4G2P78344 907 aaKnown RBP eCLIP18.5■□□□□ 0.55
CNOT4-204ENST00000414802 WAPLQ7Z5K2 1190 aa18.5■□□□□ 0.55
CNOT4-204ENST00000414802 PRAM1Q96QH2 718 aa18.5■□□□□ 0.55
CNOT4-204ENST00000414802 FAM135BQ49AJ0 1406 aa18.49■□□□□ 0.55
CNOT4-204ENST00000414802 ST20-MTHFSA0A0A6YYL1 179 aa18.49■□□□□ 0.55
CNOT4-204ENST00000414802 CENPJQ9HC77 1338 aaPredicted RBP18.49■□□□□ 0.55
CNOT4-204ENST00000414802 RBM33Q96EV2 1170 aaKnown RBP18.48■□□□□ 0.55
CNOT4-204ENST00000414802 POGKQ9P215 609 aa18.48■□□□□ 0.55
CNOT4-204ENST00000414802 LTBP4Q8N2S1 1624 aa18.47■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms