RNA–Protein interactions for RNA: ENST00000414711.5

CPNE1-208, Transcript of copine 1, humanhuman

TSL 5

Gene CPNE1, Length 673 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-208ENST00000414711 BCANQ96GW7 911 aa25.38■■□□□ 1.65
CPNE1-208ENST00000414711 DIP2AQ14689 1571 aa25.38■■□□□ 1.65
CPNE1-208ENST00000414711 NUTM2BA6NNL0 878 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-208ENST00000414711 NUTM2EB1AL46 878 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-208ENST00000414711 NUTM2AQ8IVF1 878 aaPredicted RBP25.37■■□□□ 1.65
CPNE1-208ENST00000414711 CHD2O14647 1828 aaKnown RBP25.36■■□□□ 1.65
CPNE1-208ENST00000414711 NCOA3Q9Y6Q9 1424 aa25.36■■□□□ 1.65
CPNE1-208ENST00000414711 ERBINQ96RT1 1412 aa25.35■■□□□ 1.65
CPNE1-208ENST00000414711 C14orf37Q86TY3 774 aa25.33■■□□□ 1.65
CPNE1-208ENST00000414711 KIF15Q9NS87 1388 aa25.32■■□□□ 1.64
CPNE1-208ENST00000414711 NUTM2DQ5VT03 806 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-208ENST00000414711 CADPS2Q86UW7 1296 aa25.31■■□□□ 1.64
CPNE1-208ENST00000414711 GRWD1Q9BQ67 446 aaKnown RBP eCLIP25.31■■□□□ 1.642e-14■□□□□ 8.9
CPNE1-208ENST00000414711 SIPA1L2Q9P2F8 1722 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-208ENST00000414711 KANK1Q14678 1352 aa25.3■■□□□ 1.64
CPNE1-208ENST00000414711 PLEKHG1Q9ULL1 1385 aa25.3■■□□□ 1.64
CPNE1-208ENST00000414711 RBM6P78332 1123 aaKnown RBP25.29■■□□□ 1.64
CPNE1-208ENST00000414711 LMTK2Q8IWU2 1503 aa25.28■■□□□ 1.64
CPNE1-208ENST00000414711 ZRANB1Q9UGI0 708 aa25.28■■□□□ 1.64
CPNE1-208ENST00000414711 ATF3P18847 181 aa25.27■■□□□ 1.64
CPNE1-208ENST00000414711 ATAD2Q6PL18 1390 aa25.27■■□□□ 1.64
CPNE1-208ENST00000414711 NOS1P29475 1434 aa25.27■■□□□ 1.64
CPNE1-208ENST00000414711 SETBP1Q9Y6X0 1596 aa25.27■■□□□ 1.64
CPNE1-208ENST00000414711 FOXD1Q16676 465 aa25.26■■□□□ 1.63
CPNE1-208ENST00000414711 ZFYVE9O95405 1425 aa25.26■■□□□ 1.63
CPNE1-208ENST00000414711 BRINP3Q76B58 766 aa25.25■■□□□ 1.63
CPNE1-208ENST00000414711 C19orf44Q9H6X5 657 aa25.24■■□□□ 1.63
CPNE1-208ENST00000414711 QTRT2Q9H974 415 aaKnown RBP25.24■■□□□ 1.63
CPNE1-208ENST00000414711 MYOM3Q5VTT5 1437 aa25.23■■□□□ 1.63
CPNE1-208ENST00000414711 SETD5Q9C0A6 1442 aa25.23■■□□□ 1.63
CPNE1-208ENST00000414711 C8orf37Q96NL8 207 aa25.23■■□□□ 1.63
CPNE1-208ENST00000414711 PPP1R15AO75807 674 aaPredicted RBP25.22■■□□□ 1.63
CPNE1-208ENST00000414711 ASXL1Q8IXJ9 1541 aa25.22■■□□□ 1.63
CPNE1-208ENST00000414711 RRP7BPQ9NSQ0 103 aa25.2■■□□□ 1.62
CPNE1-208ENST00000414711 RIMS2Q9UQ26 1411 aa25.2■■□□□ 1.62
CPNE1-208ENST00000414711 CROCC2H7BZ55 1655 aa25.2■■□□□ 1.62
CPNE1-208ENST00000414711 SLC52A1Q9NWF4 448 aa25.19■■□□□ 1.62
CPNE1-208ENST00000414711 TBX22Q9Y458 520 aa25.18■■□□□ 1.62
CPNE1-208ENST00000414711 NHSL1Q5SYE7 1610 aa25.17■■□□□ 1.62
CPNE1-208ENST00000414711 NGLY1Q96IV0 654 aa25.16■■□□□ 1.62
CPNE1-208ENST00000414711 DCCP43146 1447 aa25.15■■□□□ 1.62
CPNE1-208ENST00000414711 MYO5BQ9ULV0 1848 aa25.15■■□□□ 1.62
CPNE1-208ENST00000414711 GCC2Q8IWJ2 1684 aa25.14■■□□□ 1.62
CPNE1-208ENST00000414711 ADAMTS13Q76LX8 1427 aa25.14■■□□□ 1.62
CPNE1-208ENST00000414711 HDGFP51858 240 aaKnown RBP25.13■■□□□ 1.61
CPNE1-208ENST00000414711 PNPLA6Q8IY17 1366 aa25.13■■□□□ 1.61
CPNE1-208ENST00000414711 ABCC5O15440 1437 aa25.12■■□□□ 1.61
CPNE1-208ENST00000414711 LRRC59Q96AG4 307 aaKnown RBP25.12■■□□□ 1.61
CPNE1-208ENST00000414711 PIK3R4Q99570 1358 aa25.12■■□□□ 1.61
CPNE1-208ENST00000414711 TMEM131LA2VDJ0 1609 aa25.1■■□□□ 1.61
CPNE1-208ENST00000414711 MST1RQ04912 1400 aa25.09■■□□□ 1.61
CPNE1-208ENST00000414711 RPRD2Q5VT52 1461 aaKnown RBP25.09■■□□□ 1.61
CPNE1-208ENST00000414711 EP400Q96L91 3159 aa25.07■■□□□ 1.6
CPNE1-208ENST00000414711 TRPM2O94759 1503 aa25.07■■□□□ 1.6
CPNE1-208ENST00000414711 ADAMTS2O95450 1211 aa25.05■■□□□ 1.6
CPNE1-208ENST00000414711 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.05■■□□□ 1.6
CPNE1-208ENST00000414711 DAPK1P53355 1430 aa25.03■■□□□ 1.6
CPNE1-208ENST00000414711 PTPRUQ92729 1446 aa25.03■■□□□ 1.6
CPNE1-208ENST00000414711 CCDC125Q86Z20 511 aa25.02■■□□□ 1.6
CPNE1-208ENST00000414711 USP21Q9UK80 565 aa25.02■■□□□ 1.6
CPNE1-208ENST00000414711 TRPC5Q9UL62 973 aaPredicted RBP25.02■■□□□ 1.6
CPNE1-208ENST00000414711 AMOTL2Q9Y2J4 779 aa25.02■■□□□ 1.6
CPNE1-208ENST00000414711 DDX17Q92841 729 aaKnown RBP25.01■■□□□ 1.59
CPNE1-208ENST00000414711 ANKRD30AQ9BXX3 1397 aa25■■□□□ 1.59
CPNE1-208ENST00000414711 XRN1Q8IZH2 1706 aaKnown RBP24.98■■□□□ 1.59
CPNE1-208ENST00000414711 PTPN23Q9H3S7 1636 aa24.98■■□□□ 1.59
CPNE1-208ENST00000414711 ATRNO75882 1429 aa24.98■■□□□ 1.59
CPNE1-208ENST00000414711 LRP5O75197 1615 aa24.97■■□□□ 1.59
CPNE1-208ENST00000414711 KANK4Q5T7N3 995 aaPredicted RBP24.97■■□□□ 1.59
CPNE1-208ENST00000414711 CHGAP10645 457 aaKnown RBP24.96■■□□□ 1.59
CPNE1-208ENST00000414711 UNC13BO14795 1591 aa24.94■■□□□ 1.58
CPNE1-208ENST00000414711 PTCH1Q13635 1447 aa24.94■■□□□ 1.58
CPNE1-208ENST00000414711 FNBP4Q8N3X1 1017 aaPredicted RBP24.93■■□□□ 1.58
CPNE1-208ENST00000414711 CHIC2Q9UKJ5 165 aa24.92■■□□□ 1.58
CPNE1-208ENST00000414711 VPS8Q8N3P4 1428 aa24.92■■□□□ 1.58
CPNE1-208ENST00000414711 ADGRL3Q9HAR2 1447 aa24.91■■□□□ 1.58
CPNE1-208ENST00000414711 LAMC1P11047 1609 aa24.9■■□□□ 1.58
CPNE1-208ENST00000414711 BLMP54132 1417 aaPredicted RBP24.88■■□□□ 1.57
CPNE1-208ENST00000414711 NALCNQ8IZF0 1738 aa24.87■■□□□ 1.57
CPNE1-208ENST00000414711 NRXN3Q9Y4C0 1643 aa24.86■■□□□ 1.57
CPNE1-208ENST00000414711 C1orf167Q5SNV9 1468 aa24.84■■□□□ 1.57
CPNE1-208ENST00000414711 COL22A1Q8NFW1 1626 aaPredicted RBP24.83■■□□□ 1.57
CPNE1-208ENST00000414711 SOS2Q07890 1332 aaPredicted RBP24.83■■□□□ 1.56
CPNE1-208ENST00000414711 ADGRL2O95490 1459 aa24.83■■□□□ 1.56
CPNE1-208ENST00000414711 BCL9LQ86UU0 1499 aa24.83■■□□□ 1.56
CPNE1-208ENST00000414711 ANKRD50Q9ULJ7 1429 aa24.81■■□□□ 1.56
CPNE1-208ENST00000414711 DEFB132Q7Z7B7 95 aa24.8■■□□□ 1.56
CPNE1-208ENST00000414711 E9PCH4 1651 aa24.79■■□□□ 1.56
CPNE1-208ENST00000414711 MYOM2P54296 1465 aa24.79■■□□□ 1.56
CPNE1-208ENST00000414711 METP08581 1390 aa24.79■■□□□ 1.56
CPNE1-208ENST00000414711 GJD4Q96KN9 370 aaPredicted RBP24.78■■□□□ 1.56
CPNE1-208ENST00000414711 SF3B2Q13435 895 aaKnown RBP24.74■■□□□ 1.55
CPNE1-208ENST00000414711 IQGAP3Q86VI3 1631 aa24.74■■□□□ 1.55
CPNE1-208ENST00000414711 MARF1Q9Y4F3 1742 aaKnown RBP24.74■■□□□ 1.55
CPNE1-208ENST00000414711 ORAI2Q96SN7 254 aa24.73■■□□□ 1.55
CPNE1-208ENST00000414711 TNKS1BP1Q9C0C2 1729 aaKnown RBP24.72■■□□□ 1.55
CPNE1-208ENST00000414711 SPHKAPQ2M3C7 1700 aa24.72■■□□□ 1.55
CPNE1-208ENST00000414711 GLI3P10071 1580 aa24.71■■□□□ 1.55
CPNE1-208ENST00000414711 RALGAPBQ86X10 1494 aa24.71■■□□□ 1.55
CPNE1-208ENST00000414711 PSDA5PKW4 1024 aaPredicted RBP24.69■■□□□ 1.54
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms