RNA–Protein interactions for RNA: ENST00000412585.6

HLA-B-249, Transcript of major histocompatibility complex, class I, B, humanhuman

APPRIS P1 BASIC

Gene HLA-B, Length 1,547 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-B-249ENST00000412585 TMEM2Q9UHN6 1383 aa23.89■■□□□ 1.41
HLA-B-249ENST00000412585 POLR1AO95602 1720 aaPredicted RBP23.88■■□□□ 1.41
HLA-B-249ENST00000412585 RIMS2Q9UQ26 1411 aa23.88■■□□□ 1.41
HLA-B-249ENST00000412585 MYOM2P54296 1465 aa23.87■■□□□ 1.41
HLA-B-249ENST00000412585 ARHGAP23Q9P227 1491 aa23.87■■□□□ 1.41
HLA-B-249ENST00000412585 HDGFP51858 240 aaKnown RBP23.86■■□□□ 1.41
HLA-B-249ENST00000412585 L3MBTL2Q969R5 705 aa23.86■■□□□ 1.41
HLA-B-249ENST00000412585 ZFYVE9O95405 1425 aa23.86■■□□□ 1.41
HLA-B-249ENST00000412585 DCAF11Q8TEB1 546 aa23.84■■□□□ 1.41
HLA-B-249ENST00000412585 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.84■■□□□ 1.41
HLA-B-249ENST00000412585 STAC3Q96MF2 364 aa23.84■■□□□ 1.41
HLA-B-249ENST00000412585 PPP1R15AO75807 674 aaPredicted RBP23.83■■□□□ 1.41
HLA-B-249ENST00000412585 EID1Q9Y6B2 187 aa23.83■■□□□ 1.41
HLA-B-249ENST00000412585 ZNF316A6NFI3 1004 aaPredicted RBP23.82■■□□□ 1.4
HLA-B-249ENST00000412585 SCAF11Q99590 1463 aaKnown RBP23.81■■□□□ 1.4
HLA-B-249ENST00000412585 AEBP2Q6ZN18 517 aaPredicted RBP23.81■■□□□ 1.4
HLA-B-249ENST00000412585 VGFO15240 615 aaPredicted RBP23.8■■□□□ 1.4
HLA-B-249ENST00000412585 KDM2AQ9Y2K7 1162 aa23.79■■□□□ 1.4
HLA-B-249ENST00000412585 LAMC1P11047 1609 aa23.78■■□□□ 1.4
HLA-B-249ENST00000412585 TXNDC2Q86VQ3 553 aa23.77■■□□□ 1.4
HLA-B-249ENST00000412585 ANKLE2Q86XL3 938 aa23.77■■□□□ 1.4
HLA-B-249ENST00000412585 NRXN1Q9ULB1 1477 aa23.76■■□□□ 1.39
HLA-B-249ENST00000412585 NUTM2DQ5VT03 806 aaPredicted RBP23.76■■□□□ 1.39
HLA-B-249ENST00000412585 DIEXFQ68CQ4 756 aaKnown RBP23.76■■□□□ 1.39
HLA-B-249ENST00000412585 IQGAP1P46940 1657 aa23.76■■□□□ 1.39
HLA-B-249ENST00000412585 PRAG1Q86YV5 1406 aa23.75■■□□□ 1.39
HLA-B-249ENST00000412585 KIAA1210Q9ULL0 1709 aa23.75■■□□□ 1.39
HLA-B-249ENST00000412585 PIK3C2GO75747 1445 aa23.74■■□□□ 1.39
HLA-B-249ENST00000412585 HSPA2P54652 639 aa23.74■■□□□ 1.39
HLA-B-249ENST00000412585 SETBP1Q9Y6X0 1596 aa23.74■■□□□ 1.39
HLA-B-249ENST00000412585 PLEKHG1Q9ULL1 1385 aa23.73■■□□□ 1.39
HLA-B-249ENST00000412585 ADGRF5Q8IZF2 1346 aa23.73■■□□□ 1.39
HLA-B-249ENST00000412585 TRPM1Q7Z4N2 1603 aa23.72■■□□□ 1.39
HLA-B-249ENST00000412585 LTKP29376 864 aa23.72■■□□□ 1.39
HLA-B-249ENST00000412585 NRXN3Q9Y4C0 1643 aa23.71■■□□□ 1.39
HLA-B-249ENST00000412585 STRCQ7RTU9 1775 aa23.7■■□□□ 1.39
HLA-B-249ENST00000412585 BCANQ96GW7 911 aa23.7■■□□□ 1.38
HLA-B-249ENST00000412585 DIP2AQ14689 1571 aa23.7■■□□□ 1.38
HLA-B-249ENST00000412585 MED14O60244 1454 aa23.69■■□□□ 1.38
HLA-B-249ENST00000412585 NPHP4O75161 1426 aaPredicted RBP23.68■■□□□ 1.38
HLA-B-249ENST00000412585 SETD1AO15047 1707 aaKnown RBP23.67■■□□□ 1.38
HLA-B-249ENST00000412585 ALKQ9UM73 1620 aa23.66■■□□□ 1.38
HLA-B-249ENST00000412585 RALGAPBQ86X10 1494 aa23.65■■□□□ 1.38
HLA-B-249ENST00000412585 NCKAP5LQ9HCH0 1330 aa23.65■■□□□ 1.38
HLA-B-249ENST00000412585 SENP3Q9H4L4 574 aaPredicted RBP23.64■■□□□ 1.37
HLA-B-249ENST00000412585 NBPF8Q3BBV2 869 aa23.63■■□□□ 1.37
HLA-B-249ENST00000412585 ADAMTS13Q76LX8 1427 aa23.61■■□□□ 1.37
HLA-B-249ENST00000412585 ROCK2O75116 1388 aaKnown RBP23.6■■□□□ 1.37
HLA-B-249ENST00000412585 CFAP70Q5T0N1 1121 aa23.59■■□□□ 1.37
HLA-B-249ENST00000412585 C14orf93Q9H972 538 aaKnown RBP23.59■■□□□ 1.37
HLA-B-249ENST00000412585 ADGRB1O14514 1584 aa23.57■■□□□ 1.36
HLA-B-249ENST00000412585 ASXL1Q8IXJ9 1541 aa23.56■■□□□ 1.36
HLA-B-249ENST00000412585 SLC26A8Q96RN1 970 aa23.56■■□□□ 1.36
HLA-B-249ENST00000412585 TBX22Q9Y458 520 aa23.55■■□□□ 1.36
HLA-B-249ENST00000412585 DMRT2Q9Y5R5 561 aa23.55■■□□□ 1.36
HLA-B-249ENST00000412585 KNDC1Q76NI1 1749 aa23.54■■□□□ 1.36
HLA-B-249ENST00000412585 CHD2O14647 1828 aaKnown RBP23.53■■□□□ 1.36
HLA-B-249ENST00000412585 GPRASP1Q5JY77 1395 aa23.53■■□□□ 1.36
HLA-B-249ENST00000412585 PIK3R4Q99570 1358 aa23.53■■□□□ 1.36
HLA-B-249ENST00000412585 NBPF1Q3BBV0 1214 aa23.51■■□□□ 1.35
HLA-B-249ENST00000412585 METP08581 1390 aa23.51■■□□□ 1.35
HLA-B-249ENST00000412585 CARD11Q9BXL7 1154 aa23.5■■□□□ 1.35
HLA-B-249ENST00000412585 YTHDC2Q9H6S0 1430 aaKnown RBP23.5■■□□□ 1.35
HLA-B-249ENST00000412585 XRN1Q8IZH2 1706 aaKnown RBP23.49■■□□□ 1.35
HLA-B-249ENST00000412585 ARHGEF28Q8N1W1 1705 aaKnown RBP23.49■■□□□ 1.35
HLA-B-249ENST00000412585 TMEM132EQ6IEE7 984 aa23.49■■□□□ 1.35
HLA-B-249ENST00000412585 NWD1Q149M9 1564 aa23.48■■□□□ 1.35
HLA-B-249ENST00000412585 LRPPRCP42704 1394 aaKnown RBP23.47■■□□□ 1.35
HLA-B-249ENST00000412585 EIF3AQ14152 1382 aaKnown RBP23.46■■□□□ 1.35
HLA-B-249ENST00000412585 CPS1P31327 1500 aa23.46■■□□□ 1.35
HLA-B-249ENST00000412585 DLC1Q96QB1 1528 aa23.44■■□□□ 1.34
HLA-B-249ENST00000412585 TECPR2O15040 1411 aa23.43■■□□□ 1.34
HLA-B-249ENST00000412585 STK26Q9P289 416 aa23.43■■□□□ 1.34
HLA-B-249ENST00000412585 PTPRUQ92729 1446 aa23.42■■□□□ 1.34
HLA-B-249ENST00000412585 USP47Q96K76 1375 aa23.42■■□□□ 1.34
HLA-B-249ENST00000412585 NKTRP30414 1462 aaKnown RBP23.42■■□□□ 1.34
HLA-B-249ENST00000412585 ABCC11Q96J66 1382 aa23.41■■□□□ 1.34
HLA-B-249ENST00000412585 PTCH1Q13635 1447 aa23.41■■□□□ 1.34
HLA-B-249ENST00000412585 STRCP1A6NGW2 1772 aa23.4■■□□□ 1.34
HLA-B-249ENST00000412585 TRAK1Q9UPV9 953 aa23.4■■□□□ 1.34
HLA-B-249ENST00000412585 AMOTL2Q9Y2J4 779 aa23.4■■□□□ 1.34
HLA-B-249ENST00000412585 QRICH2Q9H0J4 1663 aa23.4■■□□□ 1.34
HLA-B-249ENST00000412585 KCNA6P17658 529 aa23.38■■□□□ 1.33
HLA-B-249ENST00000412585 EIF4G2P78344 907 aaKnown RBP eCLIP23.38■■□□□ 1.33
HLA-B-249ENST00000412585 FAM135BQ49AJ0 1406 aa23.36■■□□□ 1.33
HLA-B-249ENST00000412585 ROBO2Q9HCK4 1378 aa23.34■■□□□ 1.33
HLA-B-249ENST00000412585 POGKQ9P215 609 aa23.33■■□□□ 1.33
HLA-B-249ENST00000412585 CENPJQ9HC77 1338 aaPredicted RBP23.33■■□□□ 1.33
HLA-B-249ENST00000412585 SIRT1Q96EB6 747 aa23.33■■□□□ 1.32
HLA-B-249ENST00000412585 ZNF335Q9H4Z2 1342 aaPredicted RBP23.32■■□□□ 1.32
HLA-B-249ENST00000412585 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
HLA-B-249ENST00000412585 HSPA5P11021 654 aaKnown RBP23.29■■□□□ 1.32
HLA-B-249ENST00000412585 NALCNQ8IZF0 1738 aa23.28■■□□□ 1.32
HLA-B-249ENST00000412585 ST20-MTHFSA0A0A6YYL1 179 aa23.28■■□□□ 1.32
HLA-B-249ENST00000412585 MIER1Q8N108 512 aa23.28■■□□□ 1.32
HLA-B-249ENST00000412585 SCAF1Q9H7N4 1312 aaKnown RBP23.27■■□□□ 1.32
HLA-B-249ENST00000412585 PROSER2Q86WR7 435 aaPredicted RBP23.27■■□□□ 1.32
HLA-B-249ENST00000412585 PLEKHH1Q9ULM0 1364 aa23.27■■□□□ 1.31
HLA-B-249ENST00000412585 SBNO2Q9Y2G9 1366 aa23.27■■□□□ 1.31
HLA-B-249ENST00000412585 ADGRB2O60241 1585 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms