RNA–Protein interactions for RNA: ENST00000411973.3

TRAPPC12-203, Transcript of trafficking protein particle complex 12, humanhuman

TSL 5

Gene TRAPPC12, Length 838 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC12-203ENST00000411973 RIMS2Q9UQ26 1411 aa22.67■■□□□ 1.22
TRAPPC12-203ENST00000411973 HDGFP51858 240 aaKnown RBP22.67■■□□□ 1.22
TRAPPC12-203ENST00000411973 NPHP4O75161 1426 aaPredicted RBP22.65■■□□□ 1.22
TRAPPC12-203ENST00000411973 IQGAP1P46940 1657 aa22.65■■□□□ 1.22
TRAPPC12-203ENST00000411973 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.64■■□□□ 1.21
TRAPPC12-203ENST00000411973 SPATA31E1Q6ZUB1 1445 aa22.64■■□□□ 1.21
TRAPPC12-203ENST00000411973 DHX57Q6P158 1386 aaKnown RBP22.63■■□□□ 1.21
TRAPPC12-203ENST00000411973 ZNF326Q5BKZ1 582 aaKnown RBP22.62■■□□□ 1.21
TRAPPC12-203ENST00000411973 NEXMIFQ5QGS0 1516 aa22.61■■□□□ 1.21
TRAPPC12-203ENST00000411973 RPGRIP1LQ68CZ1 1315 aa22.6■■□□□ 1.21
TRAPPC12-203ENST00000411973 PLEKHG1Q9ULL1 1385 aa22.59■■□□□ 1.21
TRAPPC12-203ENST00000411973 PPP1R15AO75807 674 aaPredicted RBP22.58■■□□□ 1.21
TRAPPC12-203ENST00000411973 PPLO60437 1756 aa22.57■■□□□ 1.2
TRAPPC12-203ENST00000411973 IFT172Q9UG01 1749 aa22.54■■□□□ 1.2
TRAPPC12-203ENST00000411973 RGL3Q3MIN7 710 aa22.54■■□□□ 1.2
TRAPPC12-203ENST00000411973 NUTM2DQ5VT03 806 aaPredicted RBP22.54■■□□□ 1.2
TRAPPC12-203ENST00000411973 VGFO15240 615 aaPredicted RBP22.52■■□□□ 1.2
TRAPPC12-203ENST00000411973 SETBP1Q9Y6X0 1596 aa22.5■■□□□ 1.19
TRAPPC12-203ENST00000411973 ADAMTS13Q76LX8 1427 aa22.49■■□□□ 1.19
TRAPPC12-203ENST00000411973 NRXN3Q9Y4C0 1643 aa22.49■■□□□ 1.19
TRAPPC12-203ENST00000411973 DIP2AQ14689 1571 aa22.48■■□□□ 1.19
TRAPPC12-203ENST00000411973 BCANQ96GW7 911 aa22.48■■□□□ 1.19
TRAPPC12-203ENST00000411973 SLC26A8Q96RN1 970 aa22.48■■□□□ 1.19
TRAPPC12-203ENST00000411973 TBX22Q9Y458 520 aa22.48■■□□□ 1.19
TRAPPC12-203ENST00000411973 LTBP4Q8N2S1 1624 aa22.47■■□□□ 1.19
TRAPPC12-203ENST00000411973 ZNF335Q9H4Z2 1342 aaPredicted RBP22.47■■□□□ 1.19
TRAPPC12-203ENST00000411973 MYOM2P54296 1465 aa22.45■■□□□ 1.18
TRAPPC12-203ENST00000411973 STAC3Q96MF2 364 aa22.44■■□□□ 1.18
TRAPPC12-203ENST00000411973 SIN3AQ96ST3 1273 aa22.44■■□□□ 1.18
TRAPPC12-203ENST00000411973 ADGRF5Q8IZF2 1346 aa22.43■■□□□ 1.18
TRAPPC12-203ENST00000411973 NRXN1Q9ULB1 1477 aa22.42■■□□□ 1.18
TRAPPC12-203ENST00000411973 PIK3R4Q99570 1358 aa22.42■■□□□ 1.18
TRAPPC12-203ENST00000411973 SENP3Q9H4L4 574 aaPredicted RBP22.42■■□□□ 1.18
TRAPPC12-203ENST00000411973 STRCP1A6NGW2 1772 aa22.42■■□□□ 1.18
TRAPPC12-203ENST00000411973 CHD2O14647 1828 aaKnown RBP22.41■■□□□ 1.18
TRAPPC12-203ENST00000411973 CPS1P31327 1500 aa22.41■■□□□ 1.18
TRAPPC12-203ENST00000411973 SETD1AO15047 1707 aaKnown RBP22.4■■□□□ 1.18
TRAPPC12-203ENST00000411973 PIK3C2GO75747 1445 aa22.4■■□□□ 1.18
TRAPPC12-203ENST00000411973 ALKQ9UM73 1620 aa22.39■■□□□ 1.18
TRAPPC12-203ENST00000411973 NWD1Q149M9 1564 aa22.39■■□□□ 1.18
TRAPPC12-203ENST00000411973 KCNA6P17658 529 aa22.39■■□□□ 1.17
TRAPPC12-203ENST00000411973 DCAF11Q8TEB1 546 aa22.39■■□□□ 1.17
TRAPPC12-203ENST00000411973 NEUROD1Q13562 356 aa22.37■■□□□ 1.17
TRAPPC12-203ENST00000411973 CLSPNQ9HAW4 1339 aa22.36■■□□□ 1.17
TRAPPC12-203ENST00000411973 CERKQ8TCT0 537 aa22.35■■□□□ 1.17
TRAPPC12-203ENST00000411973 METP08581 1390 aa22.35■■□□□ 1.17
TRAPPC12-203ENST00000411973 NKTRP30414 1462 aaKnown RBP22.34■■□□□ 1.17
TRAPPC12-203ENST00000411973 L3MBTL2Q969R5 705 aa22.33■■□□□ 1.17
TRAPPC12-203ENST00000411973 C14orf93Q9H972 538 aaKnown RBP22.33■■□□□ 1.17
TRAPPC12-203ENST00000411973 KDM2AQ9Y2K7 1162 aa22.33■■□□□ 1.17
TRAPPC12-203ENST00000411973 IQSEC2Q5JU85 1478 aa22.33■■□□□ 1.16
TRAPPC12-203ENST00000411973 PTPRUQ92729 1446 aa22.32■■□□□ 1.16
TRAPPC12-203ENST00000411973 LAMC1P11047 1609 aa22.32■■□□□ 1.16
TRAPPC12-203ENST00000411973 LRRC7Q96NW7 1537 aa22.31■■□□□ 1.16
TRAPPC12-203ENST00000411973 XRN1Q8IZH2 1706 aaKnown RBP22.31■■□□□ 1.16
TRAPPC12-203ENST00000411973 AMOTL2Q9Y2J4 779 aa22.29■■□□□ 1.16
TRAPPC12-203ENST00000411973 ASXL1Q8IXJ9 1541 aa22.27■■□□□ 1.16
TRAPPC12-203ENST00000411973 XIRP1Q702N8 1843 aaKnown RBP22.27■■□□□ 1.16
TRAPPC12-203ENST00000411973 CFAP70Q5T0N1 1121 aa22.27■■□□□ 1.16
TRAPPC12-203ENST00000411973 PRAG1Q86YV5 1406 aa22.27■■□□□ 1.16
TRAPPC12-203ENST00000411973 CCER1Q8TC90 406 aaPredicted RBP22.27■■□□□ 1.16
TRAPPC12-203ENST00000411973 TONSLQ96HA7 1378 aa22.25■■□□□ 1.15
TRAPPC12-203ENST00000411973 PROSER2Q86WR7 435 aaPredicted RBP22.25■■□□□ 1.15
TRAPPC12-203ENST00000411973 KIAA1210Q9ULL0 1709 aa22.25■■□□□ 1.15
TRAPPC12-203ENST00000411973 TMEM94Q12767 1356 aa22.24■■□□□ 1.15
TRAPPC12-203ENST00000411973 TMEM132EQ6IEE7 984 aa22.23■■□□□ 1.15
TRAPPC12-203ENST00000411973 LRPPRCP42704 1394 aaKnown RBP22.23■■□□□ 1.15
TRAPPC12-203ENST00000411973 NCOA3Q9Y6Q9 1424 aa22.23■■□□□ 1.15
TRAPPC12-203ENST00000411973 ADGRB1O14514 1584 aa22.22■■□□□ 1.15
TRAPPC12-203ENST00000411973 TECPR2O15040 1411 aa22.22■■□□□ 1.15
TRAPPC12-203ENST00000411973 PTCH1Q13635 1447 aa22.22■■□□□ 1.15
TRAPPC12-203ENST00000411973 ABCC11Q96J66 1382 aa22.21■■□□□ 1.15
TRAPPC12-203ENST00000411973 YTHDC2Q9H6S0 1430 aaKnown RBP22.21■■□□□ 1.15
TRAPPC12-203ENST00000411973 KNDC1Q76NI1 1749 aa22.2■■□□□ 1.14
TRAPPC12-203ENST00000411973 TIMELESSQ9UNS1 1208 aa22.2■■□□□ 1.14
TRAPPC12-203ENST00000411973 ROBO2Q9HCK4 1378 aa22.17■■□□□ 1.14
TRAPPC12-203ENST00000411973 SIRT1Q96EB6 747 aa22.16■■□□□ 1.14
TRAPPC12-203ENST00000411973 RBM33Q96EV2 1170 aaKnown RBP22.16■■□□□ 1.14
TRAPPC12-203ENST00000411973 STK26Q9P289 416 aa22.15■■□□□ 1.14
TRAPPC12-203ENST00000411973 TRPM1Q7Z4N2 1603 aa22.15■■□□□ 1.14
TRAPPC12-203ENST00000411973 DLC1Q96QB1 1528 aa22.13■■□□□ 1.13
TRAPPC12-203ENST00000411973 FAM135BQ49AJ0 1406 aa22.13■■□□□ 1.13
TRAPPC12-203ENST00000411973 MSH6P52701 1360 aa22.12■■□□□ 1.13
TRAPPC12-203ENST00000411973 NBPF1Q3BBV0 1214 aa22.12■■□□□ 1.13
TRAPPC12-203ENST00000411973 NBPF8Q3BBV2 869 aa22.12■■□□□ 1.13
TRAPPC12-203ENST00000411973 FBXO41Q8TF61 875 aa22.11■■□□□ 1.13
TRAPPC12-203ENST00000411973 C19orf44Q9H6X5 657 aa22.11■■□□□ 1.13
TRAPPC12-203ENST00000411973 TOM1O60784 492 aa22.1■■□□□ 1.13
TRAPPC12-203ENST00000411973 SIPA1L2Q9P2F8 1722 aaPredicted RBP22.1■■□□□ 1.13
TRAPPC12-203ENST00000411973 ADGRL3Q9HAR2 1447 aa22.09■■□□□ 1.13
TRAPPC12-203ENST00000411973 UBAP1LF5GYI3 381 aa22.09■■□□□ 1.13
TRAPPC12-203ENST00000411973 C14orf37Q86TY3 774 aa22.09■■□□□ 1.13
TRAPPC12-203ENST00000411973 NALCNQ8IZF0 1738 aa22.09■■□□□ 1.13
TRAPPC12-203ENST00000411973 DCCP43146 1447 aa22.08■■□□□ 1.13
TRAPPC12-203ENST00000411973 WAPLQ7Z5K2 1190 aa22.08■■□□□ 1.13
TRAPPC12-203ENST00000411973 TRAK1Q9UPV9 953 aa22.07■■□□□ 1.12
TRAPPC12-203ENST00000411973 ARHGEF28Q8N1W1 1705 aaKnown RBP22.06■■□□□ 1.12
TRAPPC12-203ENST00000411973 GPRASP1Q5JY77 1395 aa22.06■■□□□ 1.12
TRAPPC12-203ENST00000411973 PLEKHH1Q9ULM0 1364 aa22.06■■□□□ 1.12
TRAPPC12-203ENST00000411973 RALGAPBQ86X10 1494 aa22.06■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.9 ms