RNA–Protein interactions for RNA: ENST00000411849.1

HMGN1P20-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 20, humanhuman

BASIC

Gene HMGN1P20, Length 300 nt, Biotype processed pseudogene.

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P20-201ENST00000411849 ERBINQ96RT1 1412 aa9.56□□□□□ -0.88
HMGN1P20-201ENST00000411849 MYO5BQ9ULV0 1848 aa9.56□□□□□ -0.88
HMGN1P20-201ENST00000411849 PROSER2Q86WR7 435 aaPredicted RBP9.56□□□□□ -0.88
HMGN1P20-201ENST00000411849 STAG3Q9UJ98 1225 aa9.56□□□□□ -0.88
HMGN1P20-201ENST00000411849 MYOM3Q5VTT5 1437 aa9.56□□□□□ -0.88
HMGN1P20-201ENST00000411849 MSH6P52701 1360 aa9.55□□□□□ -0.88
HMGN1P20-201ENST00000411849 KCNA6P17658 529 aa9.55□□□□□ -0.88
HMGN1P20-201ENST00000411849 COL16A1Q07092 1604 aaPredicted RBP9.55□□□□□ -0.88
HMGN1P20-201ENST00000411849 ADGRB3O60242 1522 aa9.55□□□□□ -0.88
HMGN1P20-201ENST00000411849 KANK1Q14678 1352 aa9.54□□□□□ -0.88
HMGN1P20-201ENST00000411849 JCADQ9P266 1359 aa9.54□□□□□ -0.88
HMGN1P20-201ENST00000411849 SHPRHQ149N8 1683 aa9.54□□□□□ -0.88
HMGN1P20-201ENST00000411849 KIF15Q9NS87 1388 aa9.53□□□□□ -0.88
HMGN1P20-201ENST00000411849 LMTK2Q8IWU2 1503 aa9.52□□□□□ -0.88
HMGN1P20-201ENST00000411849 GCC2Q8IWJ2 1684 aa9.52□□□□□ -0.89
HMGN1P20-201ENST00000411849 POTEHQ6S545 545 aa9.52□□□□□ -0.89
HMGN1P20-201ENST00000411849 PTPN23Q9H3S7 1636 aa9.52□□□□□ -0.89
HMGN1P20-201ENST00000411849 SLC26A8Q96RN1 970 aa9.51□□□□□ -0.89
HMGN1P20-201ENST00000411849 SLAIN2Q9P270 581 aa9.51□□□□□ -0.89
HMGN1P20-201ENST00000411849 FGD6Q6ZV73 1430 aa9.5□□□□□ -0.89
HMGN1P20-201ENST00000411849 VPS8Q8N3P4 1428 aa9.5□□□□□ -0.89
HMGN1P20-201ENST00000411849 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.5□□□□□ -0.89
HMGN1P20-201ENST00000411849 SPATA31A6Q5VVP1 1343 aa9.5□□□□□ -0.89
HMGN1P20-201ENST00000411849 AHDC1Q5TGY3 1603 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P20-201ENST00000411849 IDI1Q13907 227 aa9.49□□□□□ -0.89
HMGN1P20-201ENST00000411849 ZNF772Q68DY9 489 aaPredicted RBP9.49□□□□□ -0.89
HMGN1P20-201ENST00000411849 RBM33Q96EV2 1170 aaKnown RBP9.49□□□□□ -0.89
HMGN1P20-201ENST00000411849 BCANQ96GW7 911 aa9.49□□□□□ -0.89
HMGN1P20-201ENST00000411849 MEX3CQ5U5Q3 659 aaKnown RBP9.48□□□□□ -0.89
HMGN1P20-201ENST00000411849 RRP7BPQ9NSQ0 103 aa9.48□□□□□ -0.89
HMGN1P20-201ENST00000411849 LRP6O75581 1613 aa9.48□□□□□ -0.89
HMGN1P20-201ENST00000411849 ABCC5O15440 1437 aa9.48□□□□□ -0.89
HMGN1P20-201ENST00000411849 NOS1P29475 1434 aa9.48□□□□□ -0.89
HMGN1P20-201ENST00000411849 NCOA3Q9Y6Q9 1424 aa9.48□□□□□ -0.89
HMGN1P20-201ENST00000411849 RPRD2Q5VT52 1461 aaKnown RBP9.47□□□□□ -0.89
HMGN1P20-201ENST00000411849 DIP2AQ14689 1571 aa9.47□□□□□ -0.89
HMGN1P20-201ENST00000411849 TMEM131LA2VDJ0 1609 aa9.47□□□□□ -0.89
HMGN1P20-201ENST00000411849 UPF1Q92900 1129 aaKnown RBP eCLIP9.47□□□□□ -0.89
HMGN1P20-201ENST00000411849 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
HMGN1P20-201ENST00000411849 DAPK1P53355 1430 aa9.47□□□□□ -0.89
HMGN1P20-201ENST00000411849 CDK12Q9NYV4 1490 aaPredicted RBP9.47□□□□□ -0.89
HMGN1P20-201ENST00000411849 HDGFP51858 240 aaKnown RBP9.46□□□□□ -0.9
HMGN1P20-201ENST00000411849 TRIM52Q96A61 297 aa9.46□□□□□ -0.9
HMGN1P20-201ENST00000411849 ANKRD30AQ9BXX3 1397 aa9.46□□□□□ -0.9
HMGN1P20-201ENST00000411849 PLEKHG1Q9ULL1 1385 aa9.46□□□□□ -0.9
HMGN1P20-201ENST00000411849 ZFYVE9O95405 1425 aa9.46□□□□□ -0.9
HMGN1P20-201ENST00000411849 PPP1R15AO75807 674 aaPredicted RBP9.45□□□□□ -0.9
HMGN1P20-201ENST00000411849 C14orf37Q86TY3 774 aa9.45□□□□□ -0.9
HMGN1P20-201ENST00000411849 ABCB7O75027 752 aa9.44□□□□□ -0.9
HMGN1P20-201ENST00000411849 RXRBP28702 533 aa9.44□□□□□ -0.9
HMGN1P20-201ENST00000411849 KANK4Q5T7N3 995 aaPredicted RBP9.44□□□□□ -0.9
HMGN1P20-201ENST00000411849 CADPS2Q86UW7 1296 aa9.44□□□□□ -0.9
HMGN1P20-201ENST00000411849 RIMS2Q9UQ26 1411 aa9.44□□□□□ -0.9
HMGN1P20-201ENST00000411849 NHSL1Q5SYE7 1610 aa9.44□□□□□ -0.9
HMGN1P20-201ENST00000411849 ATF3P18847 181 aa9.43□□□□□ -0.9
HMGN1P20-201ENST00000411849 TRPM2O94759 1503 aa9.42□□□□□ -0.9
HMGN1P20-201ENST00000411849 PIK3R4Q99570 1358 aa9.42□□□□□ -0.9
HMGN1P20-201ENST00000411849 C19orf44Q9H6X5 657 aa9.42□□□□□ -0.9
HMGN1P20-201ENST00000411849 TBX22Q9Y458 520 aa9.42□□□□□ -0.9
HMGN1P20-201ENST00000411849 E9PCH4 1651 aa9.42□□□□□ -0.9
HMGN1P20-201ENST00000411849 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.41□□□□□ -0.9
HMGN1P20-201ENST00000411849 UNC13BO14795 1591 aa9.41□□□□□ -0.9
HMGN1P20-201ENST00000411849 ADGRL2O95490 1459 aa9.4□□□□□ -0.9
HMGN1P20-201ENST00000411849 DCCP43146 1447 aa9.4□□□□□ -0.9
HMGN1P20-201ENST00000411849 ASXL1Q8IXJ9 1541 aa9.4□□□□□ -0.91
HMGN1P20-201ENST00000411849 XRN1Q8IZH2 1706 aaKnown RBP9.39□□□□□ -0.91
HMGN1P20-201ENST00000411849 NUTM2BA6NNL0 878 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P20-201ENST00000411849 NUTM2EB1AL46 878 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P20-201ENST00000411849 APLP2Q06481 763 aa9.39□□□□□ -0.91
HMGN1P20-201ENST00000411849 NUTM2AQ8IVF1 878 aaPredicted RBP9.39□□□□□ -0.91
HMGN1P20-201ENST00000411849 CHIC2Q9UKJ5 165 aa9.39□□□□□ -0.91
HMGN1P20-201ENST00000411849 ADAMTS13Q76LX8 1427 aa9.39□□□□□ -0.91
HMGN1P20-201ENST00000411849 IQGAP3Q86VI3 1631 aa9.38□□□□□ -0.91
HMGN1P20-201ENST00000411849 AFF2P51816 1311 aa9.38□□□□□ -0.91
HMGN1P20-201ENST00000411849 ZNF219Q9P2Y4 722 aaPredicted RBP9.38□□□□□ -0.91
HMGN1P20-201ENST00000411849 SETD5Q9C0A6 1442 aa9.38□□□□□ -0.91
HMGN1P20-201ENST00000411849 ANKRD50Q9ULJ7 1429 aa9.38□□□□□ -0.91
HMGN1P20-201ENST00000411849 BRINP3Q76B58 766 aa9.37□□□□□ -0.91
HMGN1P20-201ENST00000411849 NALCNQ8IZF0 1738 aa9.36□□□□□ -0.91
HMGN1P20-201ENST00000411849 NRXN3Q9Y4C0 1643 aa9.36□□□□□ -0.91
HMGN1P20-201ENST00000411849 CHGAP10645 457 aaKnown RBP9.36□□□□□ -0.91
HMGN1P20-201ENST00000411849 RBM6P78332 1123 aaKnown RBP9.36□□□□□ -0.91
HMGN1P20-201ENST00000411849 RGS12O14924 1447 aa9.36□□□□□ -0.91
HMGN1P20-201ENST00000411849 LAMC1P11047 1609 aa9.35□□□□□ -0.91
HMGN1P20-201ENST00000411849 MST1RQ04912 1400 aa9.35□□□□□ -0.91
HMGN1P20-201ENST00000411849 SPHKAPQ2M3C7 1700 aa9.35□□□□□ -0.91
HMGN1P20-201ENST00000411849 LRRC59Q96AG4 307 aaKnown RBP9.35□□□□□ -0.91
HMGN1P20-201ENST00000411849 AMOTL2Q9Y2J4 779 aa9.35□□□□□ -0.91
HMGN1P20-201ENST00000411849 MARF1Q9Y4F3 1742 aaKnown RBP9.35□□□□□ -0.91
HMGN1P20-201ENST00000411849 SETBP1Q9Y6X0 1596 aa9.35□□□□□ -0.91
HMGN1P20-201ENST00000411849 NUTM2DQ5VT03 806 aaPredicted RBP9.34□□□□□ -0.91
HMGN1P20-201ENST00000411849 NGLY1Q96IV0 654 aa9.34□□□□□ -0.91
HMGN1P20-201ENST00000411849 C8orf37Q96NL8 207 aa9.34□□□□□ -0.91
HMGN1P20-201ENST00000411849 QTRT2Q9H974 415 aaKnown RBP9.34□□□□□ -0.91
HMGN1P20-201ENST00000411849 ATAD2Q6PL18 1390 aa9.34□□□□□ -0.91
HMGN1P20-201ENST00000411849 PTPRUQ92729 1446 aa9.33□□□□□ -0.92
HMGN1P20-201ENST00000411849 PNPLA6Q8IY17 1366 aa9.33□□□□□ -0.92
HMGN1P20-201ENST00000411849 KIF1BO60333 1816 aa9.32□□□□□ -0.92
HMGN1P20-201ENST00000411849 ADGRL3Q9HAR2 1447 aa9.31□□□□□ -0.92
HMGN1P20-201ENST00000411849 COL22A1Q8NFW1 1626 aaPredicted RBP9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 79.4 ms