RNA–Protein interactions for RNA: ENST00000411539.6

SEMA4B-202, Transcript of semaphorin 4B, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SEMA4B, Length 3,807 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA4B-202ENST00000411539 SKOR2Q2VWA4 1001 aaPredicted RBP20.53■□□□□ 0.88
SEMA4B-202ENST00000411539 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
SEMA4B-202ENST00000411539 FOXD4L5Q5VV16 416 aaPredicted RBP20.52■□□□□ 0.88
SEMA4B-202ENST00000411539 FOXD4L4Q8WXT5 416 aaPredicted RBP20.52■□□□□ 0.88
SEMA4B-202ENST00000411539 HECW1Q76N89 1606 aa20.52■□□□□ 0.88
SEMA4B-202ENST00000411539 PARD3Q8TEW0 1356 aa20.52■□□□□ 0.88
SEMA4B-202ENST00000411539 CASC1Q6TDU7 716 aa20.52■□□□□ 0.88
SEMA4B-202ENST00000411539 TRAK1Q9UPV9 953 aa20.52■□□□□ 0.87
SEMA4B-202ENST00000411539 RSPH4AQ5TD94 716 aa20.51■□□□□ 0.87
SEMA4B-202ENST00000411539 PER1O15534 1290 aaPredicted RBP20.51■□□□□ 0.87
SEMA4B-202ENST00000411539 KDM2BQ8NHM5 1336 aa20.51■□□□□ 0.87
SEMA4B-202ENST00000411539 NGEFQ8N5V2 710 aa20.5■□□□□ 0.87
SEMA4B-202ENST00000411539 RRP9O43818 475 aaKnown RBP20.5■□□□□ 0.87
SEMA4B-202ENST00000411539 RUNDC1Q96C34 613 aa20.5■□□□□ 0.87
SEMA4B-202ENST00000411539 DISP3Q9P2K9 1392 aa20.49■□□□□ 0.87
SEMA4B-202ENST00000411539 C9orf84Q5VXU9 1444 aa20.49■□□□□ 0.87
SEMA4B-202ENST00000411539 NASPP49321 788 aaPredicted RBP20.49■□□□□ 0.87
SEMA4B-202ENST00000411539 RBM10P98175 930 aaKnown RBP20.49■□□□□ 0.87
SEMA4B-202ENST00000411539 ZMYND15Q9H091 742 aa20.49■□□□□ 0.87
SEMA4B-202ENST00000411539 PLEKHH1Q9ULM0 1364 aa20.47■□□□□ 0.87
SEMA4B-202ENST00000411539 ELL2O00472 640 aaPredicted RBP20.47■□□□□ 0.87
SEMA4B-202ENST00000411539 WWC1Q8IX03 1113 aa20.47■□□□□ 0.87
SEMA4B-202ENST00000411539 CHMP4BQ9H444 224 aaKnown RBP20.47■□□□□ 0.87
SEMA4B-202ENST00000411539 DDX19BQ9UMR2 479 aa20.47■□□□□ 0.87
SEMA4B-202ENST00000411539 R3HCC1Q9Y3T6 440 aaKnown RBP20.46■□□□□ 0.87
SEMA4B-202ENST00000411539 CUL7Q14999 1698 aa20.46■□□□□ 0.87
SEMA4B-202ENST00000411539 SRPK2P78362 688 aaKnown RBP20.46■□□□□ 0.87
SEMA4B-202ENST00000411539 TROQ12816 1431 aaPredicted RBP20.45■□□□□ 0.86
SEMA4B-202ENST00000411539 TBC1D32Q96NH3 1257 aa20.45■□□□□ 0.86
SEMA4B-202ENST00000411539 SPINK5Q9NQ38 1064 aaPredicted RBP20.44■□□□□ 0.86
SEMA4B-202ENST00000411539 THOC2Q8NI27 1593 aaKnown RBP20.44■□□□□ 0.86
SEMA4B-202ENST00000411539 KIAA1211Q6ZU35 1233 aa20.44■□□□□ 0.86
SEMA4B-202ENST00000411539 TCOF1Q13428 1488 aaKnown RBP20.43■□□□□ 0.86
SEMA4B-202ENST00000411539 TSR2Q969E8 191 aaKnown RBP20.43■□□□□ 0.86
SEMA4B-202ENST00000411539 URB2Q14146 1524 aaKnown RBP20.43■□□□□ 0.86
SEMA4B-202ENST00000411539 MTHFSP49914 203 aa20.43■□□□□ 0.86
SEMA4B-202ENST00000411539 KDM6BO15054 1643 aa20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 AAMPQ13685 434 aa20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 MCTP1Q6DN14 999 aa20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 RALGAPBQ86X10 1494 aa20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 PLEKHH2Q8IVE3 1493 aa20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 NKTRP30414 1462 aaKnown RBP20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 CLCN1P35523 988 aa20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 FOXD4L6Q3SYB3 417 aaPredicted RBP20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 FOXD4L3Q6VB84 417 aaPredicted RBP20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 STAG3Q9UJ98 1225 aa20.42■□□□□ 0.86
SEMA4B-202ENST00000411539 CAMSAP2Q08AD1 1489 aa20.41■□□□□ 0.86
SEMA4B-202ENST00000411539 KIF3BO15066 747 aa20.41■□□□□ 0.86
SEMA4B-202ENST00000411539 STK26Q9P289 416 aa20.41■□□□□ 0.86
SEMA4B-202ENST00000411539 PCDHB15Q9Y5E8 787 aa20.41■□□□□ 0.86
SEMA4B-202ENST00000411539 NOL8Q76FK4 1167 aaKnown RBP20.41■□□□□ 0.86
SEMA4B-202ENST00000411539 RARSP54136 660 aaKnown RBP20.41■□□□□ 0.86
SEMA4B-202ENST00000411539 CFAP70Q5T0N1 1121 aa20.4■□□□□ 0.86
SEMA4B-202ENST00000411539 PDZRN4Q6ZMN7 1036 aaPredicted RBP20.4■□□□□ 0.86
SEMA4B-202ENST00000411539 NUTM2DQ5VT03 806 aaPredicted RBP20.39■□□□□ 0.86
SEMA4B-202ENST00000411539 TPM2P07951 284 aa20.39■□□□□ 0.85
SEMA4B-202ENST00000411539 EXOSC9Q06265 439 aaKnown RBP20.38■□□□□ 0.85
SEMA4B-202ENST00000411539 MVPQ14764 893 aaKnown RBP20.38■□□□□ 0.85
SEMA4B-202ENST00000411539 CAVIN1Q6NZI2 390 aaKnown RBP20.38■□□□□ 0.85
SEMA4B-202ENST00000411539 KDM5BQ9UGL1 1544 aa20.38■□□□□ 0.85
SEMA4B-202ENST00000411539 EFCAB2Q5VUJ9 269 aa20.38■□□□□ 0.85
SEMA4B-202ENST00000411539 TESK2Q96S53 571 aa20.38■□□□□ 0.85
SEMA4B-202ENST00000411539 TNNQ9UQP3 1299 aa20.38■□□□□ 0.85
SEMA4B-202ENST00000411539 KANK1Q14678 1352 aa20.37■□□□□ 0.85
SEMA4B-202ENST00000411539 KIAA2012Q0VF49 1180 aa20.37■□□□□ 0.85
SEMA4B-202ENST00000411539 PZPP20742 1482 aa20.37■□□□□ 0.85
SEMA4B-202ENST00000411539 ISY1Q9ULR0 285 aaKnown RBP20.35■□□□□ 0.85
SEMA4B-202ENST00000411539 RNF214Q8ND24 703 aa20.34■□□□□ 0.85
SEMA4B-202ENST00000411539 SLC12A5Q9H2X9 1139 aa20.34■□□□□ 0.85
SEMA4B-202ENST00000411539 CCDC173Q0VFZ6 552 aa20.34■□□□□ 0.85
SEMA4B-202ENST00000411539 AMER1Q5JTC6 1135 aaPredicted RBP20.34■□□□□ 0.85
SEMA4B-202ENST00000411539 TNPO1Q92973 898 aaKnown RBP20.34■□□□□ 0.85
SEMA4B-202ENST00000411539 SPAG9O60271 1321 aaKnown RBP20.33■□□□□ 0.85
SEMA4B-202ENST00000411539 RIPK4P57078 832 aa20.33■□□□□ 0.85
SEMA4B-202ENST00000411539 LAMC3Q9Y6N6 1575 aa20.33■□□□□ 0.85
SEMA4B-202ENST00000411539 ST18O60284 1047 aa20.33■□□□□ 0.84
SEMA4B-202ENST00000411539 DENND4BO75064 1496 aaPredicted RBP20.33■□□□□ 0.84
SEMA4B-202ENST00000411539 MAGI3Q5TCQ9 1506 aa20.32■□□□□ 0.84
SEMA4B-202ENST00000411539 NINLQ9Y2I6 1382 aa20.32■□□□□ 0.84
SEMA4B-202ENST00000411539 C1orf115Q9H7X2 142 aa20.32■□□□□ 0.84
SEMA4B-202ENST00000411539 NOB1Q9ULX3 412 aaKnown RBP20.31■□□□□ 0.84
SEMA4B-202ENST00000411539 RLBP1P12271 317 aa20.31■□□□□ 0.84
SEMA4B-202ENST00000411539 GGT6Q6P531 493 aa20.31■□□□□ 0.84
SEMA4B-202ENST00000411539 DMRT2Q9Y5R5 561 aa20.3■□□□□ 0.84
SEMA4B-202ENST00000411539 IQGAP2Q13576 1575 aa20.3■□□□□ 0.84
SEMA4B-202ENST00000411539 NPM1P06748 294 aaKnown RBP eCLIP20.3■□□□□ 0.84
SEMA4B-202ENST00000411539 CHAF1AQ13111 956 aaPredicted RBP20.29■□□□□ 0.84
SEMA4B-202ENST00000411539 CFAP44Q96MT7 982 aa20.29■□□□□ 0.84
SEMA4B-202ENST00000411539 ZSCAN30Q86W11 494 aa20.28■□□□□ 0.84
SEMA4B-202ENST00000411539 WDR63Q8IWG1 891 aa20.28■□□□□ 0.84
SEMA4B-202ENST00000411539 ATF7IPQ6VMQ6 1270 aa20.28■□□□□ 0.84
SEMA4B-202ENST00000411539 PRPF40AO75400 957 aaKnown RBP20.28■□□□□ 0.84
SEMA4B-202ENST00000411539 NUCB2P80303 420 aa20.28■□□□□ 0.84
SEMA4B-202ENST00000411539 MPNDQ8N594 471 aa20.28■□□□□ 0.84
SEMA4B-202ENST00000411539 PTPRGP23470 1445 aa20.27■□□□□ 0.84
SEMA4B-202ENST00000411539 K7ELQ4 463 aaPredicted RBP20.27■□□□□ 0.84
SEMA4B-202ENST00000411539 TMEM132EQ6IEE7 984 aa20.26■□□□□ 0.83
SEMA4B-202ENST00000411539 SYAP1Q96A49 352 aaPredicted RBP20.26■□□□□ 0.83
SEMA4B-202ENST00000411539 CTTNBP2Q8WZ74 1663 aa20.26■□□□□ 0.83
SEMA4B-202ENST00000411539 PLB1Q6P1J6 1458 aa20.26■□□□□ 0.83
Retrieved 100 of 20,778 RNA–protein pairs in 27.2 ms