RNA–Protein interactions for RNA: ENST00000410011.5

LIMS2-208, Transcript of LIM zinc finger domain containing 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene LIMS2, Length 2,335 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-208ENST00000410011 KIAA1210Q9ULL0 1709 aa22.07■■□□□ 1.12
LIMS2-208ENST00000410011 VWDEQ8N2E2 1590 aa22.06■■□□□ 1.12
LIMS2-208ENST00000410011 TET3O43151 1660 aa22.06■■□□□ 1.12
LIMS2-208ENST00000410011 PPP2R1AP30153 589 aa22.05■■□□□ 1.12
LIMS2-208ENST00000410011 ZBTB47Q9UFB7 747 aaPredicted RBP22.05■■□□□ 1.12
LIMS2-208ENST00000410011 PIK3C2GO75747 1445 aa22.05■■□□□ 1.12
LIMS2-208ENST00000410011 ADAMTS8Q9UP79 889 aa22.05■■□□□ 1.12
LIMS2-208ENST00000410011 ASXL1Q8IXJ9 1541 aa22.03■■□□□ 1.12
LIMS2-208ENST00000410011 CLTCL1P53675 1640 aa22.03■■□□□ 1.12
LIMS2-208ENST00000410011 EIF3AQ14152 1382 aaKnown RBP22.02■■□□□ 1.12
LIMS2-208ENST00000410011 BACH2Q9BYV9 841 aa22.02■■□□□ 1.12
LIMS2-208ENST00000410011 ZNF521Q96K83 1311 aa22.02■■□□□ 1.12
LIMS2-208ENST00000410011 PDE4AP27815 886 aa22.01■■□□□ 1.11
LIMS2-208ENST00000410011 KANK1Q14678 1352 aa22■■□□□ 1.11
LIMS2-208ENST00000410011 AFAP1Q8N556 730 aa21.98■■□□□ 1.11
LIMS2-208ENST00000410011 INO80Q9ULG1 1556 aaPredicted RBP21.98■■□□□ 1.11
LIMS2-208ENST00000410011 WDR43Q15061 677 aaKnown RBP eCLIP21.98■■□□□ 1.11
LIMS2-208ENST00000410011 DUSP27Q5VZP5 1158 aa21.97■■□□□ 1.11
LIMS2-208ENST00000410011 MYOM2P54296 1465 aa21.97■■□□□ 1.11
LIMS2-208ENST00000410011 ATP7AQ04656 1500 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 ABCA9Q8IUA7 1624 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 MYOM1P52179 1685 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 CRBNQ96SW2 442 aa21.96■■□□□ 1.11
LIMS2-208ENST00000410011 PLEKHH1Q9ULM0 1364 aa21.95■■□□□ 1.1
LIMS2-208ENST00000410011 PLIN1O60240 522 aa21.94■■□□□ 1.1
LIMS2-208ENST00000410011 GOLGA2Q08379 1002 aa21.94■■□□□ 1.1
LIMS2-208ENST00000410011 NGEFQ8N5V2 710 aa21.93■■□□□ 1.1
LIMS2-208ENST00000410011 DEKP35659 375 aaKnown RBP21.92■■□□□ 1.1
LIMS2-208ENST00000410011 TRMT2AQ8IZ69 625 aaKnown RBP21.92■■□□□ 1.1
LIMS2-208ENST00000410011 KDM5AP29375 1690 aaKnown RBP21.92■■□□□ 1.1
LIMS2-208ENST00000410011 MAP3K4Q9Y6R4 1608 aa21.91■■□□□ 1.1
LIMS2-208ENST00000410011 KDM2BQ8NHM5 1336 aa21.91■■□□□ 1.1
LIMS2-208ENST00000410011 FANCAO15360 1455 aa21.91■■□□□ 1.1
LIMS2-208ENST00000410011 GOLGA6L2Q8N9W4 650 aaPredicted RBP21.9■■□□□ 1.1
LIMS2-208ENST00000410011 SLFN5Q08AF3 891 aa21.9■■□□□ 1.1
LIMS2-208ENST00000410011 SBNO2Q9Y2G9 1366 aa21.89■■□□□ 1.09
LIMS2-208ENST00000410011 MROH1Q8NDA8 1641 aa21.88■■□□□ 1.09
LIMS2-208ENST00000410011 CENPQQ7L2Z9 268 aaPredicted RBP21.88■■□□□ 1.09
LIMS2-208ENST00000410011 NRXN1Q9ULB1 1477 aa21.88■■□□□ 1.09
LIMS2-208ENST00000410011 ERVK-7P63135 1459 aa21.86■■□□□ 1.09
LIMS2-208ENST00000410011 LMTK2Q8IWU2 1503 aa21.86■■□□□ 1.09
LIMS2-208ENST00000410011 NBR1Q14596 966 aa21.86■■□□□ 1.09
LIMS2-208ENST00000410011 KIF3BO15066 747 aa21.85■■□□□ 1.09
LIMS2-208ENST00000410011 MYO3AQ8NEV4 1616 aa21.85■■□□□ 1.09
LIMS2-208ENST00000410011 C20orf194Q5TEA3 1177 aa21.85■■□□□ 1.09
LIMS2-208ENST00000410011 IFT172Q9UG01 1749 aa21.84■■□□□ 1.09
LIMS2-208ENST00000410011 EFCAB6Q5THR3 1501 aa21.84■■□□□ 1.09
LIMS2-208ENST00000410011 ABCA6Q8N139 1617 aa21.84■■□□□ 1.09
LIMS2-208ENST00000410011 ADGRL1O94910 1474 aa21.83■■□□□ 1.09
LIMS2-208ENST00000410011 KIF1BO60333 1816 aa21.83■■□□□ 1.09
LIMS2-208ENST00000410011 RTL5Q5HYW3 569 aaPredicted RBP21.83■■□□□ 1.08
LIMS2-208ENST00000410011 USP35Q9P2H5 1018 aa21.83■■□□□ 1.08
LIMS2-208ENST00000410011 CFAP70Q5T0N1 1121 aa21.81■■□□□ 1.08
LIMS2-208ENST00000410011 DDRGK1Q96HY6 314 aa21.81■■□□□ 1.08
LIMS2-208ENST00000410011 SETBP1Q9Y6X0 1596 aa21.81■■□□□ 1.08
LIMS2-208ENST00000410011 NKTRP30414 1462 aaKnown RBP21.81■■□□□ 1.08
LIMS2-208ENST00000410011 ADGRF5Q8IZF2 1346 aa21.79■■□□□ 1.08
LIMS2-208ENST00000410011 E9PSI1 815 aa21.79■■□□□ 1.08
LIMS2-208ENST00000410011 POLR3AO14802 1390 aaPredicted RBP21.79■■□□□ 1.08
LIMS2-208ENST00000410011 NPM2Q86SE8 214 aaKnown RBP21.79■■□□□ 1.08
LIMS2-208ENST00000410011 CARD14Q9BXL6 1004 aa21.78■■□□□ 1.08
LIMS2-208ENST00000410011 PPM1GO15355 546 aaPredicted RBP21.76■■□□□ 1.07
LIMS2-208ENST00000410011 APAF1O14727 1248 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 UGGT1Q9NYU2 1555 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 ADGRB3O60242 1522 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 KIDINS220Q9ULH0 1771 aa21.75■■□□□ 1.07
LIMS2-208ENST00000410011 PPRC1Q5VV67 1664 aaKnown RBP21.74■■□□□ 1.07
LIMS2-208ENST00000410011 NINLQ9Y2I6 1382 aa21.73■■□□□ 1.07
LIMS2-208ENST00000410011 ZNF518AQ6AHZ1 1483 aa21.72■■□□□ 1.07
LIMS2-208ENST00000410011 FAM161AQ3B820 660 aa21.72■■□□□ 1.07
LIMS2-208ENST00000410011 CCDC146Q8IYE0 955 aa21.72■■□□□ 1.07
LIMS2-208ENST00000410011 MROH2AA6NES4 1674 aa21.71■■□□□ 1.07
LIMS2-208ENST00000410011 SPINK5Q9NQ38 1064 aaPredicted RBP21.71■■□□□ 1.07
LIMS2-208ENST00000410011 CENPJQ9HC77 1338 aaPredicted RBP21.7■■□□□ 1.07
LIMS2-208ENST00000410011 ASXL2Q76L83 1435 aa21.7■■□□□ 1.06
LIMS2-208ENST00000410011 PDE3AQ14432 1141 aa21.7■■□□□ 1.06
LIMS2-208ENST00000410011 PUS7Q96PZ0 661 aaKnown RBP21.69■■□□□ 1.06
LIMS2-208ENST00000410011 C14orf93Q9H972 538 aaKnown RBP21.69■■□□□ 1.06
LIMS2-208ENST00000410011 RPGRIP1LQ68CZ1 1315 aa21.69■■□□□ 1.06
LIMS2-208ENST00000410011 NCBP3Q53F19 620 aaKnown RBP21.68■■□□□ 1.06
LIMS2-208ENST00000410011 NOS1P29475 1434 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 C8orf34Q49A92 452 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 CGNL1Q0VF96 1302 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 SKAP1Q86WV1 359 aa21.67■■□□□ 1.06
LIMS2-208ENST00000410011 USP32Q8NFA0 1604 aa21.66■■□□□ 1.06
LIMS2-208ENST00000410011 ADGRB1O14514 1584 aa21.66■■□□□ 1.06
LIMS2-208ENST00000410011 ZC3H13Q5T200 1668 aaKnown RBP21.65■■□□□ 1.06
LIMS2-208ENST00000410011 WWC1Q8IX03 1113 aa21.65■■□□□ 1.06
LIMS2-208ENST00000410011 PPLO60437 1756 aa21.65■■□□□ 1.06
LIMS2-208ENST00000410011 MLH3Q9UHC1 1453 aa21.65■■□□□ 1.06
LIMS2-208ENST00000410011 AAMPQ13685 434 aa21.64■■□□□ 1.06
LIMS2-208ENST00000410011 BCAR3O75815 825 aa21.63■■□□□ 1.05
LIMS2-208ENST00000410011 PHF23Q9BUL5 403 aaPredicted RBP21.63■■□□□ 1.05
LIMS2-208ENST00000410011 NPATQ14207 1427 aa21.63■■□□□ 1.05
LIMS2-208ENST00000410011 NEFMP07197 916 aa21.63■■□□□ 1.05
LIMS2-208ENST00000410011 CFAP74Q9C0B2 1584 aa21.62■■□□□ 1.05
LIMS2-208ENST00000410011 SHPRHQ149N8 1683 aa21.62■■□□□ 1.05
LIMS2-208ENST00000410011 NSD3Q9BZ95 1437 aa21.62■■□□□ 1.05
LIMS2-208ENST00000410011 MORC1Q86VD1 984 aa21.61■■□□□ 1.05
LIMS2-208ENST00000410011 RUNDC1Q96C34 613 aa21.61■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms