RNA–Protein interactions for RNA: ENST00000409860.1

C4orf48-202, Transcript of chromosome 4 open reading frame 48, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene C4orf48, Length 477 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C4orf48-202ENST00000409860 MYO5BQ9ULV0 1848 aa29.85■■■□□ 2.37
C4orf48-202ENST00000409860 ANKLE2Q86XL3 938 aa29.85■■■□□ 2.37
C4orf48-202ENST00000409860 ABCF1Q8NE71 845 aaKnown RBP eCLIP29.85■■■□□ 2.37
C4orf48-202ENST00000409860 ZFYVE9O95405 1425 aa29.84■■■□□ 2.37
C4orf48-202ENST00000409860 TXNDC2Q86VQ3 553 aa29.83■■■□□ 2.37
C4orf48-202ENST00000409860 PPP1R15AO75807 674 aaPredicted RBP29.82■■■□□ 2.36
C4orf48-202ENST00000409860 SCAF11Q99590 1463 aaKnown RBP29.81■■■□□ 2.36
C4orf48-202ENST00000409860 NEXMIFQ5QGS0 1516 aa29.81■■■□□ 2.36
C4orf48-202ENST00000409860 TONSLQ96HA7 1378 aa29.8■■■□□ 2.36
C4orf48-202ENST00000409860 LTKP29376 864 aa29.78■■■□□ 2.36
C4orf48-202ENST00000409860 NUTM2DQ5VT03 806 aaPredicted RBP29.78■■■□□ 2.36
C4orf48-202ENST00000409860 VGFO15240 615 aaPredicted RBP29.77■■■□□ 2.36
C4orf48-202ENST00000409860 NCKAP5LQ9HCH0 1330 aa29.76■■■□□ 2.36
C4orf48-202ENST00000409860 DCAF11Q8TEB1 546 aa29.75■■■□□ 2.35
C4orf48-202ENST00000409860 STAC3Q96MF2 364 aa29.75■■■□□ 2.35
C4orf48-202ENST00000409860 L3MBTL2Q969R5 705 aa29.74■■■□□ 2.35
C4orf48-202ENST00000409860 PPLO60437 1756 aa29.72■■■□□ 2.35
C4orf48-202ENST00000409860 MYOM2P54296 1465 aa29.72■■■□□ 2.35
C4orf48-202ENST00000409860 TIMELESSQ9UNS1 1208 aa29.71■■■□□ 2.35
C4orf48-202ENST00000409860 KDM2AQ9Y2K7 1162 aa29.71■■■□□ 2.35
C4orf48-202ENST00000409860 PLEKHG1Q9ULL1 1385 aa29.71■■■□□ 2.35
C4orf48-202ENST00000409860 POLR1AO95602 1720 aaPredicted RBP29.7■■■□□ 2.34
C4orf48-202ENST00000409860 NPHP4O75161 1426 aaPredicted RBP29.7■■■□□ 2.34
C4orf48-202ENST00000409860 MED14O60244 1454 aa29.69■■■□□ 2.34
C4orf48-202ENST00000409860 IFT172Q9UG01 1749 aa29.69■■■□□ 2.34
C4orf48-202ENST00000409860 BCANQ96GW7 911 aa29.69■■■□□ 2.34
C4orf48-202ENST00000409860 ADGRF5Q8IZF2 1346 aa29.68■■■□□ 2.34
C4orf48-202ENST00000409860 DMRT2Q9Y5R5 561 aa29.65■■■□□ 2.34
C4orf48-202ENST00000409860 STRCQ7RTU9 1775 aa29.64■■■□□ 2.34
C4orf48-202ENST00000409860 NRXN1Q9ULB1 1477 aa29.63■■■□□ 2.33
C4orf48-202ENST00000409860 SENP3Q9H4L4 574 aaPredicted RBP29.63■■■□□ 2.33
C4orf48-202ENST00000409860 PIK3C2GO75747 1445 aa29.62■■■□□ 2.33
C4orf48-202ENST00000409860 IQGAP1P46940 1657 aa29.61■■■□□ 2.33
C4orf48-202ENST00000409860 SETBP1Q9Y6X0 1596 aa29.6■■■□□ 2.33
C4orf48-202ENST00000409860 PRAG1Q86YV5 1406 aa29.57■■■□□ 2.32
C4orf48-202ENST00000409860 ADAMTS13Q76LX8 1427 aa29.56■■■□□ 2.32
C4orf48-202ENST00000409860 SLC26A8Q96RN1 970 aa29.56■■■□□ 2.32
C4orf48-202ENST00000409860 DIP2AQ14689 1571 aa29.55■■■□□ 2.32
C4orf48-202ENST00000409860 TBX22Q9Y458 520 aa29.54■■■□□ 2.32
C4orf48-202ENST00000409860 NRXN3Q9Y4C0 1643 aa29.53■■■□□ 2.32
C4orf48-202ENST00000409860 C14orf93Q9H972 538 aaKnown RBP29.51■■■□□ 2.31
C4orf48-202ENST00000409860 ALKQ9UM73 1620 aa29.51■■■□□ 2.31
C4orf48-202ENST00000409860 CFAP70Q5T0N1 1121 aa29.5■■■□□ 2.31
C4orf48-202ENST00000409860 LAMC1P11047 1609 aa29.48■■■□□ 2.31
C4orf48-202ENST00000409860 NBPF8Q3BBV2 869 aa29.47■■■□□ 2.31
C4orf48-202ENST00000409860 PIK3R4Q99570 1358 aa29.46■■■□□ 2.31
C4orf48-202ENST00000409860 METP08581 1390 aa29.44■■■□□ 2.3
C4orf48-202ENST00000409860 SETD1AO15047 1707 aaKnown RBP29.4■■■□□ 2.3
C4orf48-202ENST00000409860 KIAA1210Q9ULL0 1709 aa29.4■■■□□ 2.3
C4orf48-202ENST00000409860 TMEM132EQ6IEE7 984 aa29.39■■■□□ 2.3
C4orf48-202ENST00000409860 ROCK2O75116 1388 aaKnown RBP29.39■■■□□ 2.29
C4orf48-202ENST00000409860 RALGAPBQ86X10 1494 aa29.38■■■□□ 2.29
C4orf48-202ENST00000409860 ASXL1Q8IXJ9 1541 aa29.38■■■□□ 2.29
C4orf48-202ENST00000409860 KCNA6P17658 529 aa29.37■■■□□ 2.29
C4orf48-202ENST00000409860 ZEB1P37275 1124 aaPredicted RBP29.37■■■□□ 2.29
C4orf48-202ENST00000409860 TRPM1Q7Z4N2 1603 aa29.37■■■□□ 2.29
C4orf48-202ENST00000409860 ADGRB1O14514 1584 aa29.36■■■□□ 2.29
C4orf48-202ENST00000409860 NBPF1Q3BBV0 1214 aa29.36■■■□□ 2.29
C4orf48-202ENST00000409860 AMOTL2Q9Y2J4 779 aa29.35■■■□□ 2.29
C4orf48-202ENST00000409860 ZNF335Q9H4Z2 1342 aaPredicted RBP29.35■■■□□ 2.29
C4orf48-202ENST00000409860 LRPPRCP42704 1394 aaKnown RBP29.35■■■□□ 2.29
C4orf48-202ENST00000409860 PTPRUQ92729 1446 aa29.35■■■□□ 2.29
C4orf48-202ENST00000409860 YTHDC2Q9H6S0 1430 aaKnown RBP29.34■■■□□ 2.29
C4orf48-202ENST00000409860 NWD1Q149M9 1564 aa29.32■■■□□ 2.28
C4orf48-202ENST00000409860 GPRASP1Q5JY77 1395 aa29.31■■■□□ 2.28
C4orf48-202ENST00000409860 STK26Q9P289 416 aa29.31■■■□□ 2.28
C4orf48-202ENST00000409860 ABCC11Q96J66 1382 aa29.3■■■□□ 2.28
C4orf48-202ENST00000409860 CARD11Q9BXL7 1154 aa29.29■■■□□ 2.28
C4orf48-202ENST00000409860 NKTRP30414 1462 aaKnown RBP29.29■■■□□ 2.28
C4orf48-202ENST00000409860 CHD2O14647 1828 aaKnown RBP29.28■■■□□ 2.28
C4orf48-202ENST00000409860 XRN1Q8IZH2 1706 aaKnown RBP29.28■■■□□ 2.28
C4orf48-202ENST00000409860 TECPR2O15040 1411 aa29.28■■■□□ 2.28
C4orf48-202ENST00000409860 PTCH1Q13635 1447 aa29.26■■■□□ 2.27
C4orf48-202ENST00000409860 TRAK1Q9UPV9 953 aa29.25■■■□□ 2.27
C4orf48-202ENST00000409860 CPS1P31327 1500 aa29.25■■■□□ 2.27
C4orf48-202ENST00000409860 DLC1Q96QB1 1528 aa29.22■■■□□ 2.27
C4orf48-202ENST00000409860 PROSER2Q86WR7 435 aaPredicted RBP29.22■■■□□ 2.27
C4orf48-202ENST00000409860 ROBO2Q9HCK4 1378 aa29.22■■■□□ 2.27
C4orf48-202ENST00000409860 KNDC1Q76NI1 1749 aa29.22■■■□□ 2.27
C4orf48-202ENST00000409860 SIRT1Q96EB6 747 aa29.21■■■□□ 2.27
C4orf48-202ENST00000409860 EIF3AQ14152 1382 aaKnown RBP29.2■■■□□ 2.26
C4orf48-202ENST00000409860 STRCP1A6NGW2 1772 aa29.2■■■□□ 2.26
C4orf48-202ENST00000409860 LTBP4Q8N2S1 1624 aa29.2■■■□□ 2.26
C4orf48-202ENST00000409860 FAM135BQ49AJ0 1406 aa29.2■■■□□ 2.26
C4orf48-202ENST00000409860 POGKQ9P215 609 aa29.17■■■□□ 2.26
C4orf48-202ENST00000409860 PRAM1Q96QH2 718 aa29.16■■■□□ 2.26
C4orf48-202ENST00000409860 LRRC7Q96NW7 1537 aa29.15■■■□□ 2.26
C4orf48-202ENST00000409860 TMEM94Q12767 1356 aa29.15■■■□□ 2.26
C4orf48-202ENST00000409860 WAPLQ7Z5K2 1190 aa29.14■■■□□ 2.26
C4orf48-202ENST00000409860 USP47Q96K76 1375 aa29.13■■■□□ 2.25
C4orf48-202ENST00000409860 PLEKHH1Q9ULM0 1364 aa29.13■■■□□ 2.25
C4orf48-202ENST00000409860 NCOA3Q9Y6Q9 1424 aa29.12■■■□□ 2.25
C4orf48-202ENST00000409860 ARHGEF28Q8N1W1 1705 aaKnown RBP29.11■■■□□ 2.25
C4orf48-202ENST00000409860 C14orf37Q86TY3 774 aa29.11■■■□□ 2.25
C4orf48-202ENST00000409860 RBM33Q96EV2 1170 aaKnown RBP29.11■■■□□ 2.25
C4orf48-202ENST00000409860 CENPJQ9HC77 1338 aaPredicted RBP29.11■■■□□ 2.25
C4orf48-202ENST00000409860 SAFB2Q14151 953 aaKnown RBP eCLIP29.09■■■□□ 2.25
C4orf48-202ENST00000409860 EIF4G2P78344 907 aaKnown RBP eCLIP29.06■■■□□ 2.24
C4orf48-202ENST00000409860 ADGRL3Q9HAR2 1447 aa29.05■■■□□ 2.24
C4orf48-202ENST00000409860 MSH6P52701 1360 aa29.03■■■□□ 2.24
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms