RNA–Protein interactions for RNA: ENST00000409823.7

PMS1-204, Transcript of PMS1 homolog 1, mismatch repair system component, humanhuman

TSL 5 BASIC

Gene PMS1, Length 2,795 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PMS1-204ENST00000409823 RIMS2Q9UQ26 1411 aa17.91■□□□□ 0.46
PMS1-204ENST00000409823 THEMISQ8N1K5 641 aaPredicted RBP17.91■□□□□ 0.46
PMS1-204ENST00000409823 UBR1Q8IWV7 1749 aa17.91■□□□□ 0.46
PMS1-204ENST00000409823 LTKP29376 864 aa17.91■□□□□ 0.46
PMS1-204ENST00000409823 CFAP70Q5T0N1 1121 aa17.91■□□□□ 0.46
PMS1-204ENST00000409823 TMEM2Q9UHN6 1383 aa17.9■□□□□ 0.46
PMS1-204ENST00000409823 NEURL4Q96JN8 1562 aa17.9■□□□□ 0.46
PMS1-204ENST00000409823 CEP170BQ9Y4F5 1589 aaPredicted RBP17.9■□□□□ 0.46
PMS1-204ENST00000409823 BCANQ96GW7 911 aa17.9■□□□□ 0.46
PMS1-204ENST00000409823 UHRF1BP1Q6BDS2 1440 aa17.9■□□□□ 0.46
PMS1-204ENST00000409823 TXNDC2Q86VQ3 553 aa17.89■□□□□ 0.45
PMS1-204ENST00000409823 SETD1BQ9UPS6 1966 aaKnown RBP17.88■□□□□ 0.45
PMS1-204ENST00000409823 PPLO60437 1756 aa17.87■□□□□ 0.45
PMS1-204ENST00000409823 ROCK2O75116 1388 aaKnown RBP17.87■□□□□ 0.45
PMS1-204ENST00000409823 HSPA2P54652 639 aa17.87■□□□□ 0.45
PMS1-204ENST00000409823 CARD11Q9BXL7 1154 aa17.86■□□□□ 0.45
PMS1-204ENST00000409823 IFT172Q9UG01 1749 aa17.86■□□□□ 0.45
PMS1-204ENST00000409823 ZFYVE9O95405 1425 aa17.86■□□□□ 0.45
PMS1-204ENST00000409823 MYOM2P54296 1465 aa17.86■□□□□ 0.45
PMS1-204ENST00000409823 TMEM132EQ6IEE7 984 aa17.86■□□□□ 0.45
PMS1-204ENST00000409823 EID1Q9Y6B2 187 aa17.85■□□□□ 0.45
PMS1-204ENST00000409823 STAC3Q96MF2 364 aa17.85■□□□□ 0.45
PMS1-204ENST00000409823 PIK3C2GO75747 1445 aa17.84■□□□□ 0.45
PMS1-204ENST00000409823 ABCF1Q8NE71 845 aaKnown RBP eCLIP17.84■□□□□ 0.45
PMS1-204ENST00000409823 HDGFP51858 240 aaKnown RBP17.83■□□□□ 0.45
PMS1-204ENST00000409823 NRXN1Q9ULB1 1477 aa17.82■□□□□ 0.44
PMS1-204ENST00000409823 RALGAPBQ86X10 1494 aa17.82■□□□□ 0.44
PMS1-204ENST00000409823 SLC26A8Q96RN1 970 aa17.81■□□□□ 0.44
PMS1-204ENST00000409823 C14orf93Q9H972 538 aaKnown RBP17.81■□□□□ 0.44
PMS1-204ENST00000409823 KDM5AP29375 1690 aaKnown RBP17.81■□□□□ 0.44
PMS1-204ENST00000409823 TRPM1Q7Z4N2 1603 aa17.8■□□□□ 0.44
PMS1-204ENST00000409823 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
PMS1-204ENST00000409823 ZNF142P52746 1687 aaPredicted RBP17.79■□□□□ 0.44
PMS1-204ENST00000409823 NCKAP5LQ9HCH0 1330 aa17.79■□□□□ 0.44
PMS1-204ENST00000409823 SLIT1O75093 1534 aa17.79■□□□□ 0.44
PMS1-204ENST00000409823 ARHGAP23Q9P227 1491 aa17.79■□□□□ 0.44
PMS1-204ENST00000409823 HSPA5P11021 654 aaKnown RBP17.79■□□□□ 0.44
PMS1-204ENST00000409823 STK26Q9P289 416 aa17.79■□□□□ 0.44
PMS1-204ENST00000409823 EIF4G2P78344 907 aaKnown RBP eCLIP17.78■□□□□ 0.44
PMS1-204ENST00000409823 SCAF11Q99590 1463 aaKnown RBP17.77■□□□□ 0.44
PMS1-204ENST00000409823 USP47Q96K76 1375 aa17.77■□□□□ 0.43
PMS1-204ENST00000409823 TRAK1Q9UPV9 953 aa17.76■□□□□ 0.43
PMS1-204ENST00000409823 LMTK3Q96Q04 1460 aa17.76■□□□□ 0.43
PMS1-204ENST00000409823 PLEKHG1Q9ULL1 1385 aa17.74■□□□□ 0.43
PMS1-204ENST00000409823 ST20-MTHFSA0A0A6YYL1 179 aa17.74■□□□□ 0.43
PMS1-204ENST00000409823 ALKQ9UM73 1620 aa17.74■□□□□ 0.43
PMS1-204ENST00000409823 METP08581 1390 aa17.74■□□□□ 0.43
PMS1-204ENST00000409823 GPRASP1Q5JY77 1395 aa17.74■□□□□ 0.43
PMS1-204ENST00000409823 ZNF316A6NFI3 1004 aaPredicted RBP17.72■□□□□ 0.43
PMS1-204ENST00000409823 NRXN3Q9Y4C0 1643 aa17.72■□□□□ 0.43
PMS1-204ENST00000409823 IQGAP1P46940 1657 aa17.72■□□□□ 0.43
PMS1-204ENST00000409823 ADAMTS13Q76LX8 1427 aa17.71■□□□□ 0.43
PMS1-204ENST00000409823 SAFB2Q14151 953 aaKnown RBP eCLIP17.71■□□□□ 0.43
PMS1-204ENST00000409823 ADGRB1O14514 1584 aa17.7■□□□□ 0.42
PMS1-204ENST00000409823 ASXL1Q8IXJ9 1541 aa17.7■□□□□ 0.42
PMS1-204ENST00000409823 SETBP1Q9Y6X0 1596 aa17.69■□□□□ 0.42
PMS1-204ENST00000409823 KIAA1210Q9ULL0 1709 aa17.68■□□□□ 0.42
PMS1-204ENST00000409823 NPHP4O75161 1426 aaPredicted RBP17.67■□□□□ 0.42
PMS1-204ENST00000409823 YTHDC2Q9H6S0 1430 aaKnown RBP17.67■□□□□ 0.42
PMS1-204ENST00000409823 C11orf95C9JLR9 678 aaPredicted RBP17.66■□□□□ 0.42
PMS1-204ENST00000409823 POLR3GLQ9BT43 218 aa17.66■□□□□ 0.42
PMS1-204ENST00000409823 TBX22Q9Y458 520 aa17.66■□□□□ 0.42
PMS1-204ENST00000409823 WAPLQ7Z5K2 1190 aa17.65■□□□□ 0.42
PMS1-204ENST00000409823 LAMC1P11047 1609 aa17.65■□□□□ 0.42
PMS1-204ENST00000409823 PRAM1Q96QH2 718 aa17.64■□□□□ 0.41
PMS1-204ENST00000409823 SETD1AO15047 1707 aaKnown RBP17.64■□□□□ 0.41
PMS1-204ENST00000409823 AMOTL2Q9Y2J4 779 aa17.64■□□□□ 0.41
PMS1-204ENST00000409823 AEBP2Q6ZN18 517 aaPredicted RBP17.63■□□□□ 0.41
PMS1-204ENST00000409823 MED14O60244 1454 aa17.63■□□□□ 0.41
PMS1-204ENST00000409823 RBM33Q96EV2 1170 aaKnown RBP17.62■□□□□ 0.41
PMS1-204ENST00000409823 POGKQ9P215 609 aa17.62■□□□□ 0.41
PMS1-204ENST00000409823 PTPRUQ92729 1446 aa17.62■□□□□ 0.41
PMS1-204ENST00000409823 TESK2Q96S53 571 aa17.62■□□□□ 0.41
PMS1-204ENST00000409823 POLR1AO95602 1720 aaPredicted RBP17.62■□□□□ 0.41
PMS1-204ENST00000409823 EIF3AQ14152 1382 aaKnown RBP17.62■□□□□ 0.41
PMS1-204ENST00000409823 CENPJQ9HC77 1338 aaPredicted RBP17.61■□□□□ 0.41
PMS1-204ENST00000409823 LRPPRCP42704 1394 aaKnown RBP17.61■□□□□ 0.41
PMS1-204ENST00000409823 PLEKHH1Q9ULM0 1364 aa17.61■□□□□ 0.41
PMS1-204ENST00000409823 KCNA6P17658 529 aa17.6■□□□□ 0.41
PMS1-204ENST00000409823 WASHC2AQ641Q2 1341 aa17.59■□□□□ 0.41
PMS1-204ENST00000409823 MINK1Q8N4C8 1332 aaPredicted RBP17.59■□□□□ 0.41
PMS1-204ENST00000409823 ROBO2Q9HCK4 1378 aa17.59■□□□□ 0.41
PMS1-204ENST00000409823 ABCC11Q96J66 1382 aa17.58■□□□□ 0.41
PMS1-204ENST00000409823 STRCQ7RTU9 1775 aa17.57■□□□□ 0.4
PMS1-204ENST00000409823 DISP3Q9P2K9 1392 aa17.57■□□□□ 0.4
PMS1-204ENST00000409823 KIF7Q2M1P5 1343 aa17.56■□□□□ 0.4
PMS1-204ENST00000409823 DDX10Q13206 875 aaKnown RBP17.55■□□□□ 0.4
PMS1-204ENST00000409823 ARHGEF28Q8N1W1 1705 aaKnown RBP17.55■□□□□ 0.4
PMS1-204ENST00000409823 DIP2AQ14689 1571 aa17.55■□□□□ 0.4
PMS1-204ENST00000409823 TMF1P82094 1093 aa17.55■□□□□ 0.4
PMS1-204ENST00000409823 CCDC7Q96M83 1385 aa17.52■□□□□ 0.4
PMS1-204ENST00000409823 PIK3R4Q99570 1358 aa17.51■□□□□ 0.39
PMS1-204ENST00000409823 TECPR2O15040 1411 aa17.51■□□□□ 0.39
PMS1-204ENST00000409823 ZNF335Q9H4Z2 1342 aaPredicted RBP17.51■□□□□ 0.39
PMS1-204ENST00000409823 QRICH2Q9H0J4 1663 aa17.51■□□□□ 0.39
PMS1-204ENST00000409823 CABP2Q9NPB3 220 aa17.51■□□□□ 0.39
PMS1-204ENST00000409823 NUTM2FA1L443 756 aa17.5■□□□□ 0.39
PMS1-204ENST00000409823 SRPK2P78362 688 aaKnown RBP17.49■□□□□ 0.39
PMS1-204ENST00000409823 DLC1Q96QB1 1528 aa17.49■□□□□ 0.39
PMS1-204ENST00000409823 CPS1P31327 1500 aa17.48■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 104.9 ms