RNA–Protein interactions for RNA: ENST00000409416.5

COL6A2-204, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,430 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-204ENST00000409416 ADGRF5Q8IZF2 1346 aa17.43■□□□□ 0.38
COL6A2-204ENST00000409416 ELL2O00472 640 aaPredicted RBP17.43■□□□□ 0.38
COL6A2-204ENST00000409416 CFAP65Q6ZU64 1925 aaKnown RBP17.43■□□□□ 0.38
COL6A2-204ENST00000409416 NUP160Q12769 1436 aa17.43■□□□□ 0.38
COL6A2-204ENST00000409416 ERBINQ96RT1 1412 aa17.43■□□□□ 0.38
COL6A2-204ENST00000409416 BCAR3O75815 825 aa17.43■□□□□ 0.38
COL6A2-204ENST00000409416 SYCP2Q9BX26 1530 aa17.43■□□□□ 0.38
COL6A2-204ENST00000409416 CROCC2H7BZ55 1655 aa17.43■□□□□ 0.38
COL6A2-204ENST00000409416 PARD3Q8TEW0 1356 aa17.43■□□□□ 0.38
COL6A2-204ENST00000409416 ARHGEF12Q9NZN5 1544 aa17.42■□□□□ 0.38
COL6A2-204ENST00000409416 ESF1Q9H501 851 aaKnown RBP17.41■□□□□ 0.38
COL6A2-204ENST00000409416 SHANK2Q9UPX8 1470 aa17.41■□□□□ 0.38
COL6A2-204ENST00000409416 PPP2R1AP30153 589 aa17.41■□□□□ 0.38
COL6A2-204ENST00000409416 COG6Q9Y2V7 657 aa17.41■□□□□ 0.38
COL6A2-204ENST00000409416 GGNBP2Q9H3C7 697 aa17.4■□□□□ 0.38
COL6A2-204ENST00000409416 KANK1Q14678 1352 aa17.39■□□□□ 0.37
COL6A2-204ENST00000409416 A2MP01023 1474 aa17.39■□□□□ 0.37
COL6A2-204ENST00000409416 PANK1Q8TE04 598 aa17.38■□□□□ 0.37
COL6A2-204ENST00000409416 BACH2Q9BYV9 841 aa17.38■□□□□ 0.37
COL6A2-204ENST00000409416 ABCA8O94911 1581 aa17.38■□□□□ 0.37
COL6A2-204ENST00000409416 GOLGA2Q08379 1002 aa17.37■□□□□ 0.37
COL6A2-204ENST00000409416 TRAPPC8Q9Y2L5 1435 aa17.37■□□□□ 0.37
COL6A2-204ENST00000409416 ADCY10Q96PN6 1610 aa17.37■□□□□ 0.37
COL6A2-204ENST00000409416 ERCC6L2Q5T890 1561 aa17.35■□□□□ 0.37
COL6A2-204ENST00000409416 SAMD9LQ8IVG5 1584 aa17.35■□□□□ 0.37
COL6A2-204ENST00000409416 PLA2R1Q13018 1463 aa17.35■□□□□ 0.37
COL6A2-204ENST00000409416 C14orf37Q86TY3 774 aa17.34■□□□□ 0.37
COL6A2-204ENST00000409416 KDM5DQ9BY66 1539 aa17.34■□□□□ 0.37
COL6A2-204ENST00000409416 CDCA8Q53HL2 280 aa17.34■□□□□ 0.37
COL6A2-204ENST00000409416 GOLGA6L2Q8N9W4 650 aaPredicted RBP17.33■□□□□ 0.37
COL6A2-204ENST00000409416 APBB1O00213 710 aa17.32■□□□□ 0.36
COL6A2-204ENST00000409416 SPINK5Q9NQ38 1064 aaPredicted RBP17.32■□□□□ 0.36
COL6A2-204ENST00000409416 COL17A1Q9UMD9 1497 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-204ENST00000409416 MTHFSP49914 203 aa17.31■□□□□ 0.36
COL6A2-204ENST00000409416 FBXO31Q5XUX0 539 aaPredicted RBP17.31■□□□□ 0.36
COL6A2-204ENST00000409416 OSCARQ8IYS5 282 aa17.31■□□□□ 0.36
COL6A2-204ENST00000409416 DMRT2Q9Y5R5 561 aa17.31■□□□□ 0.36
COL6A2-204ENST00000409416 TNNQ9UQP3 1299 aa17.3■□□□□ 0.36
COL6A2-204ENST00000409416 TSR2Q969E8 191 aaKnown RBP17.3■□□□□ 0.36
COL6A2-204ENST00000409416 PLEKHH1Q9ULM0 1364 aa17.29■□□□□ 0.36
COL6A2-204ENST00000409416 MS4A1P11836 297 aa17.29■□□□□ 0.36
COL6A2-204ENST00000409416 SLKQ9H2G2 1235 aaPredicted RBP17.29■□□□□ 0.36
COL6A2-204ENST00000409416 HMOX1P09601 288 aa17.28■□□□□ 0.36
COL6A2-204ENST00000409416 DUSP27Q5VZP5 1158 aa17.28■□□□□ 0.36
COL6A2-204ENST00000409416 FTSJ3Q8IY81 847 aaKnown RBP17.27■□□□□ 0.36
COL6A2-204ENST00000409416 TTC37Q6PGP7 1564 aa17.26■□□□□ 0.35
COL6A2-204ENST00000409416 AMER1Q5JTC6 1135 aaPredicted RBP17.26■□□□□ 0.35
COL6A2-204ENST00000409416 ARHGEF5Q12774 1597 aa17.26■□□□□ 0.35
COL6A2-204ENST00000409416 DDRGK1Q96HY6 314 aa17.26■□□□□ 0.35
COL6A2-204ENST00000409416 TRPM1Q7Z4N2 1603 aa17.26■□□□□ 0.35
COL6A2-204ENST00000409416 CDC42BPBQ9Y5S2 1711 aa17.25■□□□□ 0.35
COL6A2-204ENST00000409416 FAM69CQ0P6D2 419 aa17.25■□□□□ 0.35
COL6A2-204ENST00000409416 CENPJQ9HC77 1338 aaPredicted RBP17.25■□□□□ 0.35
COL6A2-204ENST00000409416 ZNF428Q96B54 188 aa17.24■□□□□ 0.35
COL6A2-204ENST00000409416 GPRASP1Q5JY77 1395 aa17.24■□□□□ 0.35
COL6A2-204ENST00000409416 CFAP53Q96M91 514 aa17.24■□□□□ 0.35
COL6A2-204ENST00000409416 CENPQQ7L2Z9 268 aaPredicted RBP17.24■□□□□ 0.35
COL6A2-204ENST00000409416 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.23■□□□□ 0.35
COL6A2-204ENST00000409416 MAGI2Q86UL8 1455 aa17.23■□□□□ 0.35
COL6A2-204ENST00000409416 THUMPD2Q9BTF0 503 aaKnown RBP17.23■□□□□ 0.35
COL6A2-204ENST00000409416 MAPK8IP3Q9UPT6 1336 aa17.23■□□□□ 0.35
COL6A2-204ENST00000409416 TCP11L2Q8N4U5 519 aa17.22■□□□□ 0.35
COL6A2-204ENST00000409416 CARD14Q9BXL6 1004 aa17.22■□□□□ 0.35
COL6A2-204ENST00000409416 TPRNQ4KMQ1 711 aa17.22■□□□□ 0.35
COL6A2-204ENST00000409416 WAPLQ7Z5K2 1190 aa17.22■□□□□ 0.35
COL6A2-204ENST00000409416 IL27Q8NEV9 243 aa17.22■□□□□ 0.35
COL6A2-204ENST00000409416 RBM33Q96EV2 1170 aaKnown RBP17.21■□□□□ 0.35
COL6A2-204ENST00000409416 PREX2Q70Z35 1606 aa17.21■□□□□ 0.35
COL6A2-204ENST00000409416 BLMP54132 1417 aaPredicted RBP17.2■□□□□ 0.34
COL6A2-204ENST00000409416 SLFN5Q08AF3 891 aa17.19■□□□□ 0.34
COL6A2-204ENST00000409416 ITPRIPQ8IWB1 547 aa17.19■□□□□ 0.34
COL6A2-204ENST00000409416 PRAM1Q96QH2 718 aa17.19■□□□□ 0.34
COL6A2-204ENST00000409416 FAM161AQ3B820 660 aa17.19■□□□□ 0.34
COL6A2-204ENST00000409416 LMOD2Q6P5Q4 547 aa17.19■□□□□ 0.34
COL6A2-204ENST00000409416 NUTM2GQ5VZR2 741 aa17.19■□□□□ 0.34
COL6A2-204ENST00000409416 EIF3AQ14152 1382 aaKnown RBP17.18■□□□□ 0.34
COL6A2-204ENST00000409416 NCKAP5LQ9HCH0 1330 aa17.18■□□□□ 0.34
COL6A2-204ENST00000409416 SMC4Q9NTJ3 1288 aa17.18■□□□□ 0.34
COL6A2-204ENST00000409416 E9PCH4 1651 aa17.17■□□□□ 0.34
COL6A2-204ENST00000409416 PRDM15P57071 1507 aaPredicted RBP17.17■□□□□ 0.34
COL6A2-204ENST00000409416 DUOX2Q9NRD8 1548 aa17.17■□□□□ 0.34
COL6A2-204ENST00000409416 IDI1Q13907 227 aa17.17■□□□□ 0.34
COL6A2-204ENST00000409416 FOXD4L1Q9NU39 408 aa17.16■□□□□ 0.34
COL6A2-204ENST00000409416 UGGT1Q9NYU2 1555 aa17.16■□□□□ 0.34
COL6A2-204ENST00000409416 ZMYM4Q5VZL5 1548 aa17.16■□□□□ 0.34
COL6A2-204ENST00000409416 LTV1Q96GA3 475 aaPredicted RBP17.15■□□□□ 0.34
COL6A2-204ENST00000409416 WDR7Q9Y4E6 1490 aa17.14■□□□□ 0.34
COL6A2-204ENST00000409416 TRHP20396 242 aaPredicted RBP17.14■□□□□ 0.33
COL6A2-204ENST00000409416 TXNDC2Q86VQ3 553 aa17.14■□□□□ 0.33
COL6A2-204ENST00000409416 PLCH2O75038 1416 aa17.14■□□□□ 0.33
COL6A2-204ENST00000409416 E9PSI1 815 aa17.14■□□□□ 0.33
COL6A2-204ENST00000409416 NFKBIBQ15653 356 aa17.14■□□□□ 0.33
COL6A2-204ENST00000409416 NECTIN2Q92692 538 aa17.14■□□□□ 0.33
COL6A2-204ENST00000409416 CABP1Q9NZU7 370 aa17.14■□□□□ 0.33
COL6A2-204ENST00000409416 C1orf115Q9H7X2 142 aa17.14■□□□□ 0.33
COL6A2-204ENST00000409416 NOS1P29475 1434 aa17.13■□□□□ 0.33
COL6A2-204ENST00000409416 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
COL6A2-204ENST00000409416 ADGRL1O94910 1474 aa17.12■□□□□ 0.33
COL6A2-204ENST00000409416 EIF2AK4Q9P2K8 1649 aaKnown RBP17.12■□□□□ 0.33
COL6A2-204ENST00000409416 IGHDP01880 384 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 116.4 ms