RNA–Protein interactions for RNA: ENST00000409161.5

SHANK2-203, Transcript of SH3 and multiple ankyrin repeat domains 2, humanhuman

TSL 1 (best) BASIC

Gene SHANK2, Length 9,208 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHANK2-203ENST00000409161 DDX19BQ9UMR2 479 aa14.72□□□□□ -0.05
SHANK2-203ENST00000409161 NASPP49321 788 aaPredicted RBP14.72□□□□□ -0.05
SHANK2-203ENST00000409161 ZKSCAN2Q63HK3 967 aa14.72□□□□□ -0.05
SHANK2-203ENST00000409161 CPLX1O14810 134 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 BICD2Q8TD16 824 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 SOX12O15370 315 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 USP8P40818 1118 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 NOL10Q9BSC4 688 aaKnown RBP14.71□□□□□ -0.05
SHANK2-203ENST00000409161 INCENPQ9NQS7 918 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 CCDC73Q6ZRK6 1079 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 PKD2Q13563 968 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 NEXNQ0ZGT2 675 aa14.71□□□□□ -0.05
SHANK2-203ENST00000409161 CT47A1Q5JQC4 288 aaPredicted RBP14.71□□□□□ -0.05
SHANK2-203ENST00000409161 FRAT2O75474 233 aaPredicted RBP14.71□□□□□ -0.06
SHANK2-203ENST00000409161 OLFM4Q6UX06 510 aa14.71□□□□□ -0.06
SHANK2-203ENST00000409161 CAVIN1Q6NZI2 390 aaKnown RBP14.7□□□□□ -0.06
SHANK2-203ENST00000409161 RILPL2Q969X0 211 aa14.7□□□□□ -0.06
SHANK2-203ENST00000409161 TXLNBQ8N3L3 684 aa14.7□□□□□ -0.06
SHANK2-203ENST00000409161 RRP1P56182 461 aaKnown RBP14.7□□□□□ -0.06
SHANK2-203ENST00000409161 ANKRD45Q5TZF3 282 aa14.7□□□□□ -0.06
SHANK2-203ENST00000409161 TRDNQ13061 729 aa14.7□□□□□ -0.06
SHANK2-203ENST00000409161 SAFBQ15424 915 aaKnown RBP eCLIP14.7□□□□□ -0.06
SHANK2-203ENST00000409161 CSB-PGBD3P0DP91 1061 aa14.69□□□□□ -0.06
SHANK2-203ENST00000409161 EPS15P42566 896 aa14.69□□□□□ -0.06
SHANK2-203ENST00000409161 NUP155O75694 1391 aa14.69□□□□□ -0.06
SHANK2-203ENST00000409161 INTS3Q68E01 1043 aaKnown RBP14.69□□□□□ -0.06
SHANK2-203ENST00000409161 FOXD4L5Q5VV16 416 aaPredicted RBP14.69□□□□□ -0.06
SHANK2-203ENST00000409161 FOXD4L4Q8WXT5 416 aaPredicted RBP14.69□□□□□ -0.06
SHANK2-203ENST00000409161 CARMIL1Q5VZK9 1371 aa14.68□□□□□ -0.06
SHANK2-203ENST00000409161 PAK3O75914 559 aaPredicted RBP14.68□□□□□ -0.06
SHANK2-203ENST00000409161 ZNF330Q9Y3S2 320 aaPredicted RBP14.68□□□□□ -0.06
SHANK2-203ENST00000409161 GOLGA6L10A6NI86 522 aa14.68□□□□□ -0.06
SHANK2-203ENST00000409161 MBD3O95983 291 aa14.68□□□□□ -0.06
SHANK2-203ENST00000409161 ERLIN2O94905 339 aa14.67□□□□□ -0.06
SHANK2-203ENST00000409161 NAP1L1P55209 391 aaKnown RBP14.67□□□□□ -0.06
SHANK2-203ENST00000409161 NINLQ9Y2I6 1382 aa14.67□□□□□ -0.06
SHANK2-203ENST00000409161 ZSCAN21Q9Y5A6 473 aaPredicted RBP14.67□□□□□ -0.06
SHANK2-203ENST00000409161 CUX2O14529 1486 aa14.67□□□□□ -0.06
SHANK2-203ENST00000409161 BRMS1Q9HCU9 246 aa14.67□□□□□ -0.06
SHANK2-203ENST00000409161 SMARCA2P51531 1590 aa14.66□□□□□ -0.06
SHANK2-203ENST00000409161 SMARCE1Q969G3 411 aa14.66□□□□□ -0.06
SHANK2-203ENST00000409161 MPHOSPH9Q99550 1183 aa14.66□□□□□ -0.06
SHANK2-203ENST00000409161 ERICH2A1L162 156 aa14.66□□□□□ -0.06
SHANK2-203ENST00000409161 RSPH4AQ5TD94 716 aa14.66□□□□□ -0.06
SHANK2-203ENST00000409161 KIAA0754O94854 1291 aa14.66□□□□□ -0.06
SHANK2-203ENST00000409161 CCDC43Q96MW1 224 aaKnown RBP14.65□□□□□ -0.06
SHANK2-203ENST00000409161 TRIM34Q9BYJ4 488 aa14.65□□□□□ -0.06
SHANK2-203ENST00000409161 LUC7LQ9NQ29 371 aaKnown RBP14.65□□□□□ -0.06
SHANK2-203ENST00000409161 PIP4K2AP48426 406 aaPredicted RBP14.65□□□□□ -0.06
SHANK2-203ENST00000409161 ANKRD18AQ8IVF6 992 aa14.65□□□□□ -0.06
SHANK2-203ENST00000409161 SMC3Q9UQE7 1217 aa14.65□□□□□ -0.06
SHANK2-203ENST00000409161 PRDM2Q13029 1718 aa14.65□□□□□ -0.06
SHANK2-203ENST00000409161 PDCP20941 246 aa14.65□□□□□ -0.06
SHANK2-203ENST00000409161 SAFB2Q14151 953 aaKnown RBP eCLIP14.64□□□□□ -0.07
SHANK2-203ENST00000409161 CLUAP1Q96AJ1 413 aa14.64□□□□□ -0.07
SHANK2-203ENST00000409161 XBP1P17861 261 aa14.64□□□□□ -0.07
SHANK2-203ENST00000409161 IQCEQ6IPM2 695 aa14.64□□□□□ -0.07
SHANK2-203ENST00000409161 ANO2Q9NQ90 1003 aa14.64□□□□□ -0.07
SHANK2-203ENST00000409161 ERC2O15083 957 aa14.64□□□□□ -0.07
SHANK2-203ENST00000409161 MCM2P49736 904 aa14.64□□□□□ -0.07
SHANK2-203ENST00000409161 CCDC144AA2RUR9 1427 aa14.63□□□□□ -0.07
SHANK2-203ENST00000409161 EIF3JO75822 258 aaKnown RBP14.63□□□□□ -0.07
SHANK2-203ENST00000409161 HSP90AB4PQ58FF6 505 aa14.63□□□□□ -0.07
SHANK2-203ENST00000409161 HSP90AB2PQ58FF8 381 aa14.63□□□□□ -0.07
SHANK2-203ENST00000409161 STK26Q9P289 416 aa14.63□□□□□ -0.07
SHANK2-203ENST00000409161 RABEP1Q15276 862 aa14.62□□□□□ -0.07
SHANK2-203ENST00000409161 OFD1O75665 1012 aa14.62□□□□□ -0.07
SHANK2-203ENST00000409161 AMPHP49418 695 aa14.62□□□□□ -0.07
SHANK2-203ENST00000409161 GTF2E1P29083 439 aaPredicted RBP14.61□□□□□ -0.07
SHANK2-203ENST00000409161 PSMA5P28066 241 aa14.61□□□□□ -0.07
SHANK2-203ENST00000409161 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.61□□□□□ -0.07
SHANK2-203ENST00000409161 C9orf78Q9NZ63 289 aaPredicted RBP14.6□□□□□ -0.07
SHANK2-203ENST00000409161 IFIT2P09913 472 aaKnown RBP14.6□□□□□ -0.07
SHANK2-203ENST00000409161 PKNOX2Q96KN3 472 aa14.6□□□□□ -0.07
SHANK2-203ENST00000409161 CTDP1Q9Y5B0 961 aaPredicted RBP14.6□□□□□ -0.07
SHANK2-203ENST00000409161 CUX1P39880 1505 aa14.6□□□□□ -0.07
SHANK2-203ENST00000409161 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
SHANK2-203ENST00000409161 TSPYL1Q9H0U9 437 aa14.6□□□□□ -0.07
SHANK2-203ENST00000409161 KINO60870 393 aaKnown RBP14.59□□□□□ -0.07
SHANK2-203ENST00000409161 ERLIN1O75477 346 aa14.59□□□□□ -0.07
SHANK2-203ENST00000409161 RRP9O43818 475 aaKnown RBP14.59□□□□□ -0.07
SHANK2-203ENST00000409161 API5Q9BZZ5 524 aaKnown RBP14.59□□□□□ -0.07
SHANK2-203ENST00000409161 FILIP1LQ4L180 1135 aa14.59□□□□□ -0.07
SHANK2-203ENST00000409161 DDX58O95786 925 aaKnown RBP14.58□□□□□ -0.07
SHANK2-203ENST00000409161 CCDC146Q8IYE0 955 aa14.58□□□□□ -0.07
SHANK2-203ENST00000409161 C1orf141Q5JVX7 400 aa14.58□□□□□ -0.07
SHANK2-203ENST00000409161 CT47B1P0C2W7 299 aaPredicted RBP14.58□□□□□ -0.08
SHANK2-203ENST00000409161 DEF6Q9H4E7 631 aa14.58□□□□□ -0.08
SHANK2-203ENST00000409161 NFXL1Q6ZNB6 911 aa14.57□□□□□ -0.08
SHANK2-203ENST00000409161 AXDND1Q5T1B0 1012 aaPredicted RBP14.57□□□□□ -0.08
SHANK2-203ENST00000409161 VPS37CA5D8V6 355 aaPredicted RBP14.57□□□□□ -0.08
SHANK2-203ENST00000409161 EZRP15311 586 aaKnown RBP14.57□□□□□ -0.08
SHANK2-203ENST00000409161 EID1Q9Y6B2 187 aa14.57□□□□□ -0.08
SHANK2-203ENST00000409161 FOXD4L6Q3SYB3 417 aaPredicted RBP14.57□□□□□ -0.08
SHANK2-203ENST00000409161 FOXD4L3Q6VB84 417 aaPredicted RBP14.57□□□□□ -0.08
SHANK2-203ENST00000409161 C22orf23Q9BZE7 217 aa14.57□□□□□ -0.08
SHANK2-203ENST00000409161 PDIA4P13667 645 aaKnown RBP14.56□□□□□ -0.08
SHANK2-203ENST00000409161 DHX16O60231 1041 aaKnown RBP14.56□□□□□ -0.08
SHANK2-203ENST00000409161 R3HCC1Q9Y3T6 440 aaKnown RBP14.56□□□□□ -0.08
SHANK2-203ENST00000409161 TXLNAP40222 546 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms