RNA–Protein interactions for RNA: ENST00000409148.1

LRRTM1-202, Transcript of leucine rich repeat transmembrane neuronal 1, humanhuman

APPRIS P1 TSL 4 BASIC

Gene LRRTM1, Length 2,126 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRTM1-202ENST00000409148 CAMSAP1Q5T5Y3 1602 aa23.43■■□□□ 1.34
LRRTM1-202ENST00000409148 FKBP8Q14318 412 aa23.42■■□□□ 1.34
LRRTM1-202ENST00000409148 MYBBP1AQ9BQG0 1328 aaKnown RBP23.42■■□□□ 1.34
LRRTM1-202ENST00000409148 EIF3AQ14152 1382 aaKnown RBP23.42■■□□□ 1.34
LRRTM1-202ENST00000409148 WASHC2CQ9Y4E1 1318 aa23.41■■□□□ 1.34
LRRTM1-202ENST00000409148 BRD4O60885 1362 aaPredicted RBP23.4■■□□□ 1.34
LRRTM1-202ENST00000409148 ZC3H13Q5T200 1668 aaKnown RBP23.39■■□□□ 1.34
LRRTM1-202ENST00000409148 TMC1Q8TDI8 760 aa23.39■■□□□ 1.33
LRRTM1-202ENST00000409148 NRXN1Q9ULB1 1477 aa23.38■■□□□ 1.33
LRRTM1-202ENST00000409148 PARD3Q8TEW0 1356 aa23.37■■□□□ 1.33
LRRTM1-202ENST00000409148 TSPOAP1O95153 1857 aa23.37■■□□□ 1.33
LRRTM1-202ENST00000409148 CDCA8Q53HL2 280 aa23.36■■□□□ 1.33
LRRTM1-202ENST00000409148 PER1O15534 1290 aaPredicted RBP23.36■■□□□ 1.33
LRRTM1-202ENST00000409148 FAM69CQ0P6D2 419 aa23.35■■□□□ 1.33
LRRTM1-202ENST00000409148 ZMYM4Q5VZL5 1548 aa23.35■■□□□ 1.33
LRRTM1-202ENST00000409148 CFAP65Q6ZU64 1925 aaKnown RBP23.35■■□□□ 1.33
LRRTM1-202ENST00000409148 ADGRF5Q8IZF2 1346 aa23.34■■□□□ 1.33
LRRTM1-202ENST00000409148 PNISRQ8TF01 805 aaKnown RBP23.33■■□□□ 1.33
LRRTM1-202ENST00000409148 PPLO60437 1756 aa23.33■■□□□ 1.33
LRRTM1-202ENST00000409148 NOS1P29475 1434 aa23.33■■□□□ 1.33
LRRTM1-202ENST00000409148 YEATS2Q9ULM3 1422 aa23.33■■□□□ 1.33
LRRTM1-202ENST00000409148 SLC24A1O60721 1099 aa23.32■■□□□ 1.32
LRRTM1-202ENST00000409148 PANK3Q9H999 370 aa23.32■■□□□ 1.32
LRRTM1-202ENST00000409148 ARHGAP31Q2M1Z3 1444 aa23.32■■□□□ 1.32
LRRTM1-202ENST00000409148 SYNMO15061 1565 aa23.31■■□□□ 1.32
LRRTM1-202ENST00000409148 CHGAP10645 457 aaKnown RBP23.31■■□□□ 1.32
LRRTM1-202ENST00000409148 CFAP70Q5T0N1 1121 aa23.31■■□□□ 1.32
LRRTM1-202ENST00000409148 ANP32EQ9BTT0 268 aa23.31■■□□□ 1.32
LRRTM1-202ENST00000409148 SIGLEC1Q9BZZ2 1709 aa23.31■■□□□ 1.32
LRRTM1-202ENST00000409148 SETBP1Q9Y6X0 1596 aa23.3■■□□□ 1.32
LRRTM1-202ENST00000409148 NLRP13Q86W25 1043 aa23.3■■□□□ 1.32
LRRTM1-202ENST00000409148 PIK3C2BO00750 1634 aa23.3■■□□□ 1.32
LRRTM1-202ENST00000409148 RPGRIP1LQ68CZ1 1315 aa23.3■■□□□ 1.32
LRRTM1-202ENST00000409148 LRPPRCP42704 1394 aaKnown RBP23.28■■□□□ 1.32
LRRTM1-202ENST00000409148 KDM5AP29375 1690 aaKnown RBP23.28■■□□□ 1.32
LRRTM1-202ENST00000409148 TSHZ2Q9NRE2 1034 aa23.27■■□□□ 1.32
LRRTM1-202ENST00000409148 MYO3AQ8NEV4 1616 aa23.27■■□□□ 1.32
LRRTM1-202ENST00000409148 BCANQ96GW7 911 aa23.27■■□□□ 1.32
LRRTM1-202ENST00000409148 PIK3C2GO75747 1445 aa23.26■■□□□ 1.31
LRRTM1-202ENST00000409148 MYOM1P52179 1685 aa23.24■■□□□ 1.31
LRRTM1-202ENST00000409148 CC2D1BQ5T0F9 858 aaKnown RBP23.22■■□□□ 1.31
LRRTM1-202ENST00000409148 REREQ9P2R6 1566 aa23.21■■□□□ 1.31
LRRTM1-202ENST00000409148 SBNO2Q9Y2G9 1366 aa23.21■■□□□ 1.31
LRRTM1-202ENST00000409148 KNSTRNQ9Y448 316 aa23.2■■□□□ 1.3
LRRTM1-202ENST00000409148 SMG6Q86US8 1419 aaKnown RBP23.2■■□□□ 1.3
LRRTM1-202ENST00000409148 C14orf93Q9H972 538 aaKnown RBP23.2■■□□□ 1.3
LRRTM1-202ENST00000409148 PREX1Q8TCU6 1659 aa23.19■■□□□ 1.3
LRRTM1-202ENST00000409148 ERVK-7P63135 1459 aa23.19■■□□□ 1.3
LRRTM1-202ENST00000409148 NEXMIFQ5QGS0 1516 aa23.18■■□□□ 1.3
LRRTM1-202ENST00000409148 SLC52A1Q9NWF4 448 aa23.17■■□□□ 1.3
LRRTM1-202ENST00000409148 ADGRB1O14514 1584 aa23.17■■□□□ 1.3
LRRTM1-202ENST00000409148 ERICH6BQ5W0A0 696 aa23.17■■□□□ 1.3
LRRTM1-202ENST00000409148 AGLP35573 1532 aa23.16■■□□□ 1.3
LRRTM1-202ENST00000409148 ASXL1Q8IXJ9 1541 aa23.16■■□□□ 1.3
LRRTM1-202ENST00000409148 VGFO15240 615 aaPredicted RBP23.15■■□□□ 1.3
LRRTM1-202ENST00000409148 BCL11AQ9H165 835 aa23.15■■□□□ 1.3
LRRTM1-202ENST00000409148 CENPJQ9HC77 1338 aaPredicted RBP23.15■■□□□ 1.3
LRRTM1-202ENST00000409148 INSRP06213 1382 aa23.14■■□□□ 1.3
LRRTM1-202ENST00000409148 NUDCQ9Y266 331 aa23.14■■□□□ 1.29
LRRTM1-202ENST00000409148 NPC1L1Q9UHC9 1359 aa23.13■■□□□ 1.29
LRRTM1-202ENST00000409148 QRICH2Q9H0J4 1663 aa23.13■■□□□ 1.29
LRRTM1-202ENST00000409148 IDI1Q13907 227 aa23.12■■□□□ 1.29
LRRTM1-202ENST00000409148 AMER1Q5JTC6 1135 aaPredicted RBP23.11■■□□□ 1.29
LRRTM1-202ENST00000409148 PPP6R1Q9UPN7 881 aa23.11■■□□□ 1.29
LRRTM1-202ENST00000409148 ZFYVE9O95405 1425 aa23.11■■□□□ 1.29
LRRTM1-202ENST00000409148 TMEM131LA2VDJ0 1609 aa23.1■■□□□ 1.29
LRRTM1-202ENST00000409148 TRAK1Q9UPV9 953 aa23.09■■□□□ 1.29
LRRTM1-202ENST00000409148 MYO5BQ9ULV0 1848 aa23.08■■□□□ 1.28
LRRTM1-202ENST00000409148 IRX6P78412 446 aaPredicted RBP23.07■■□□□ 1.28
LRRTM1-202ENST00000409148 BLMP54132 1417 aaPredicted RBP23.06■■□□□ 1.28
LRRTM1-202ENST00000409148 PPP2R1AP30153 589 aa23.05■■□□□ 1.28
LRRTM1-202ENST00000409148 TMEM132EQ6IEE7 984 aa23.05■■□□□ 1.28
LRRTM1-202ENST00000409148 ARHGEF40Q8TER5 1519 aa23.05■■□□□ 1.28
LRRTM1-202ENST00000409148 ARHGEF28Q8N1W1 1705 aaKnown RBP23.04■■□□□ 1.28
LRRTM1-202ENST00000409148 CLTCQ00610 1675 aaKnown RBP23.04■■□□□ 1.28
LRRTM1-202ENST00000409148 NUTM2DQ5VT03 806 aaPredicted RBP23.02■■□□□ 1.28
LRRTM1-202ENST00000409148 PDE3BQ13370 1112 aa23.01■■□□□ 1.27
LRRTM1-202ENST00000409148 TRHP20396 242 aaPredicted RBP23■■□□□ 1.27
LRRTM1-202ENST00000409148 PPP4R2Q9NY27 417 aa23■■□□□ 1.27
LRRTM1-202ENST00000409148 SENP3-EIF4A1A0A087X0R7 540 aa22.99■■□□□ 1.27
LRRTM1-202ENST00000409148 FBXO31Q5XUX0 539 aaPredicted RBP22.99■■□□□ 1.27
LRRTM1-202ENST00000409148 SPATA31D1Q6ZQQ2 1576 aa22.97■■□□□ 1.27
LRRTM1-202ENST00000409148 PUS7Q96PZ0 661 aaKnown RBP22.97■■□□□ 1.27
LRRTM1-202ENST00000409148 RNF123Q5XPI4 1314 aa22.97■■□□□ 1.27
LRRTM1-202ENST00000409148 WDR43Q15061 677 aaKnown RBP eCLIP22.96■■□□□ 1.27
LRRTM1-202ENST00000409148 CARD14Q9BXL6 1004 aa22.96■■□□□ 1.27
LRRTM1-202ENST00000409148 EVC2Q86UK5 1308 aa22.95■■□□□ 1.26
LRRTM1-202ENST00000409148 STAG3Q9UJ98 1225 aa22.94■■□□□ 1.26
LRRTM1-202ENST00000409148 TULP4Q9NRJ4 1543 aa22.92■■□□□ 1.26
LRRTM1-202ENST00000409148 USP32Q8NFA0 1604 aa22.92■■□□□ 1.26
LRRTM1-202ENST00000409148 ADAMTS8Q9UP79 889 aa22.91■■□□□ 1.26
LRRTM1-202ENST00000409148 SALL2Q9Y467 1007 aaPredicted RBP22.91■■□□□ 1.26
LRRTM1-202ENST00000409148 NSD3Q9BZ95 1437 aa22.91■■□□□ 1.26
LRRTM1-202ENST00000409148 MLECQ14165 292 aa22.89■■□□□ 1.25
LRRTM1-202ENST00000409148 ALKQ9UM73 1620 aa22.88■■□□□ 1.25
LRRTM1-202ENST00000409148 SLC12A5Q9H2X9 1139 aa22.88■■□□□ 1.25
LRRTM1-202ENST00000409148 A2ML1A8K2U0 1454 aa22.88■■□□□ 1.25
LRRTM1-202ENST00000409148 YTHDC2Q9H6S0 1430 aaKnown RBP22.87■■□□□ 1.25
LRRTM1-202ENST00000409148 PTPRMP28827 1452 aa22.87■■□□□ 1.25
LRRTM1-202ENST00000409148 ESF1Q9H501 851 aaKnown RBP22.87■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 27.7 ms