RNA–Protein interactions for RNA: ENST00000406533.7

KCNMA1-212, Transcript of potassium calcium-activated channel subfamily M alpha 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene KCNMA1, Length 5,639 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KCNMA1-212ENST00000406533 ZSCAN30Q86W11 494 aa9.98□□□□□ -0.81
KCNMA1-212ENST00000406533 CDCA8Q53HL2 280 aa9.98□□□□□ -0.81
KCNMA1-212ENST00000406533 TIGD1Q96MW7 591 aa9.98□□□□□ -0.81
KCNMA1-212ENST00000406533 BCL11BQ9C0K0 894 aaPredicted RBP9.98□□□□□ -0.81
KCNMA1-212ENST00000406533 PLB1Q6P1J6 1458 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 KIF3BO15066 747 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 FRAT2O75474 233 aaPredicted RBP9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 DCTN1Q14203 1278 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 CAVIN1Q6NZI2 390 aaKnown RBP9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 KNSTRNQ9Y448 316 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 HECW1Q76N89 1606 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 BRD2P25440 801 aaKnown RBP9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 PRDM10Q9NQV6 1147 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 IFT57Q9NWB7 429 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 TEX14Q8IWB6 1497 aa9.97□□□□□ -0.81
KCNMA1-212ENST00000406533 CCDC34Q96HJ3 373 aa9.96□□□□□ -0.81
KCNMA1-212ENST00000406533 GTPBP4Q9BZE4 634 aaKnown RBP9.96□□□□□ -0.81
KCNMA1-212ENST00000406533 U2SURPO15042 1029 aaKnown RBP9.96□□□□□ -0.82
KCNMA1-212ENST00000406533 HSP90B1P14625 803 aaKnown RBP9.96□□□□□ -0.82
KCNMA1-212ENST00000406533 HOMER1Q86YM7 354 aa9.96□□□□□ -0.82
KCNMA1-212ENST00000406533 GPATCH11Q8N954 259 aa9.96□□□□□ -0.82
KCNMA1-212ENST00000406533 GRPEL1Q9HAV7 217 aa9.96□□□□□ -0.82
KCNMA1-212ENST00000406533 CTR9Q6PD62 1173 aa9.95□□□□□ -0.82
KCNMA1-212ENST00000406533 BECN2A8MW95 431 aa9.95□□□□□ -0.82
KCNMA1-212ENST00000406533 MSH5O43196 834 aa9.95□□□□□ -0.82
KCNMA1-212ENST00000406533 GTF2A1P52655 376 aaPredicted RBP9.95□□□□□ -0.82
KCNMA1-212ENST00000406533 ARHGAP5Q13017 1502 aa9.95□□□□□ -0.82
KCNMA1-212ENST00000406533 NUCB2P80303 420 aa9.95□□□□□ -0.82
KCNMA1-212ENST00000406533 DYDC1Q8WWB3 177 aa9.95□□□□□ -0.82
KCNMA1-212ENST00000406533 HNRNPMP52272 730 aaKnown RBP eCLIP9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 CASKIN1Q8WXD9 1431 aa9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 POGKQ9P215 609 aa9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 EIF4G3O43432 1585 aaKnown RBP9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 ZBED9Q6R2W3 1325 aa9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 E9PSI1 815 aa9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 SASS6Q6UVJ0 657 aa9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 CHMP4AQ9BY43 222 aa9.94□□□□□ -0.82
KCNMA1-212ENST00000406533 C11orf95C9JLR9 678 aaPredicted RBP9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 KIAA0754O94854 1291 aa9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 CBX1P83916 185 aa9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 RUFY1Q96T51 708 aa9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 DYNC1I1O14576 645 aa9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 SMAP1Q8IYB5 467 aaPredicted RBP9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 CLCN1P35523 988 aa9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 FYCO1Q9BQS8 1478 aa9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 FOXD4L1Q9NU39 408 aa9.93□□□□□ -0.82
KCNMA1-212ENST00000406533 ERICH4A6NGS2 130 aa9.92□□□□□ -0.82
KCNMA1-212ENST00000406533 PES1O00541 588 aaKnown RBP9.92□□□□□ -0.82
KCNMA1-212ENST00000406533 PLCD3Q8N3E9 789 aa9.92□□□□□ -0.82
KCNMA1-212ENST00000406533 RUSC2Q8N2Y8 1516 aa9.92□□□□□ -0.82
KCNMA1-212ENST00000406533 IPO8O15397 1037 aaKnown RBP9.92□□□□□ -0.82
KCNMA1-212ENST00000406533 KDM2AQ9Y2K7 1162 aa9.92□□□□□ -0.82
KCNMA1-212ENST00000406533 FAM107BQ9H098 131 aa9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 PRXQ9BXM0 1461 aa9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 CCDC112Q8NEF3 446 aa9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 PHLDB1Q86UU1 1377 aa9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 KIF20AO95235 890 aa9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 CCDC9Q9Y3X0 531 aaKnown RBP9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 RNF20Q5VTR2 975 aa9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 INCENPQ9NQS7 918 aa9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 PAIP2Q9BPZ3 127 aaKnown RBP9.91□□□□□ -0.82
KCNMA1-212ENST00000406533 NBPF1Q3BBV0 1214 aa9.9□□□□□ -0.82
KCNMA1-212ENST00000406533 RRP1P56182 461 aaKnown RBP9.9□□□□□ -0.82
KCNMA1-212ENST00000406533 RBM28Q9NW13 759 aaKnown RBP9.9□□□□□ -0.82
KCNMA1-212ENST00000406533 ADAMTS12P58397 1594 aa9.9□□□□□ -0.82
KCNMA1-212ENST00000406533 MYOM3Q5VTT5 1437 aa9.9□□□□□ -0.83
KCNMA1-212ENST00000406533 MEX3CQ5U5Q3 659 aaKnown RBP9.9□□□□□ -0.83
KCNMA1-212ENST00000406533 MBD3O95983 291 aa9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 TPD52L1Q16890 204 aaPredicted RBP9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 CD109Q6YHK3 1445 aa9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 TPM1P09493 284 aa9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 SIN3AQ96ST3 1273 aa9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 EIF3JO75822 258 aaKnown RBP9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 TDO2P48775 406 aa9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 LMOD3Q0VAK6 560 aa9.89□□□□□ -0.83
KCNMA1-212ENST00000406533 RALBP1Q15311 655 aa9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 NEUROD2Q15784 382 aa9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 EXOC6Q8TAG9 804 aa9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 PLCD4Q9BRC7 762 aa9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 GOLGA6L7A0A1B0GV03 622 aa9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 KTN1Q86UP2 1357 aaKnown RBP9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 CCP110O43303 1012 aa9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 IPO4Q8TEX9 1081 aaKnown RBP9.88□□□□□ -0.83
KCNMA1-212ENST00000406533 TSR1Q2NL82 804 aaKnown RBP9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 TROQ12816 1431 aaPredicted RBP9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 RGL3Q3MIN7 710 aa9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 EHBP1L1Q8N3D4 1523 aa9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 DHX8Q14562 1220 aaKnown RBP9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 CARD11Q9BXL7 1154 aa9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 NUP155O75694 1391 aa9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 WWC1Q8IX03 1113 aa9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 DDX11Q96FC9 970 aa9.87□□□□□ -0.83
KCNMA1-212ENST00000406533 MCM5P33992 734 aa9.86□□□□□ -0.83
KCNMA1-212ENST00000406533 ZRSR2Q15696 482 aaKnown RBP9.86□□□□□ -0.83
KCNMA1-212ENST00000406533 AKNAQ7Z591 1439 aa9.85□□□□□ -0.83
KCNMA1-212ENST00000406533 ERLIN1O75477 346 aa9.85□□□□□ -0.83
KCNMA1-212ENST00000406533 FAM193AP78312 1265 aa9.85□□□□□ -0.83
KCNMA1-212ENST00000406533 THOC2Q8NI27 1593 aaKnown RBP9.84□□□□□ -0.83
KCNMA1-212ENST00000406533 TTLL5Q6EMB2 1281 aa9.84□□□□□ -0.83
Retrieved 100 of 20,778 RNA–protein pairs in 55.2 ms