RNA–Protein interactions for RNA: ENST00000405943.3

HDGFP1-201, Transcript of heparin binding growth factor pseudogene 1, humanhuman

BASIC

Gene HDGFP1, Length 252 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFP1-201ENST00000405943 POGKQ9P215 609 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 NPC1L1Q9UHC9 1359 aa5.75□□□□□ -1.49
HDGFP1-201ENST00000405943 PIK3C2GO75747 1445 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 CARMIL2Q6F5E8 1435 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 PRG4Q92954 1404 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 PRDM15P57071 1507 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 ADCY10Q96PN6 1610 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 FSD2A1L4K1 749 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 SKOR2Q2VWA4 1001 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 TRMT2AQ8IZ69 625 aaKnown RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 SLKQ9H2G2 1235 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 MYH16Q9H6N6 1097 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 CCDC141Q6ZP82 1450 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 ABCC2Q92887 1545 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 SCAPERQ9BY12 1400 aa5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 CENPJQ9HC77 1338 aaPredicted RBP5.74□□□□□ -1.49
HDGFP1-201ENST00000405943 DISP3Q9P2K9 1392 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 PLEKHH1Q9ULM0 1364 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 MCM4P33991 863 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 SKAP1Q86WV1 359 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 HSCBQ8IWL3 235 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TBC1D32Q96NH3 1257 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TESK2Q96S53 571 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 ANTXR1Q9H6X2 564 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 RRAGDQ9NQL2 400 aaPredicted RBP5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TARBP1Q13395 1621 aaKnown RBP5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TRPM1Q7Z4N2 1603 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 DISP1Q96F81 1524 aa5.73□□□□□ -1.49
HDGFP1-201ENST00000405943 TRAK2O60296 914 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 XRCC6P12956 609 aaKnown RBP eCLIP5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 VSIG10Q8N0Z9 540 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 GBP4Q96PP9 640 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 ASXL1Q8IXJ9 1541 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 FAM135AQ9P2D6 1515 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 USP19O94966 1318 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 PLXNC1O60486 1568 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 ARHGEF5Q12774 1597 aa5.72□□□□□ -1.49
HDGFP1-201ENST00000405943 SYNJ2O15056 1496 aa5.71□□□□□ -1.49
HDGFP1-201ENST00000405943 ABCC10Q5T3U5 1492 aa5.71□□□□□ -1.49
HDGFP1-201ENST00000405943 ESPNB1AK53 854 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 GOLGA6L22H0YM25 854 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 MAP7D2Q96T17 732 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 TBC1D2Q9BYX2 928 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 GRPEL1Q9HAV7 217 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 CIZ1Q9ULV3 898 aaPredicted RBP5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 PBRM1Q86U86 1689 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 SYNMO15061 1565 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 A2MP01023 1474 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 MAGI1Q96QZ7 1491 aaPredicted RBP5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 IFT140Q96RY7 1462 aa5.71□□□□□ -1.5
HDGFP1-201ENST00000405943 IGHDP01880 384 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 CT47B1P0C2W7 299 aaPredicted RBP5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 TERF1P54274 439 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 NBPF1Q3BBV0 1214 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 RGL3Q3MIN7 710 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 NCBP3Q53F19 620 aaKnown RBP5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 ZMYND15Q9H091 742 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 PDCL3Q9H2J4 239 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 ATP10AO60312 1499 aa5.7□□□□□ -1.5
HDGFP1-201ENST00000405943 APAF1O14727 1248 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 BCAR3O75815 825 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 CCDC173Q0VFZ6 552 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 AMER1Q5JTC6 1135 aaPredicted RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 MTERF4Q7Z6M4 381 aaKnown RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 CFAP44Q96MT7 982 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 C22orf23Q9BZE7 217 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 GZF1Q9H116 711 aaPredicted RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 GRIN2AQ12879 1464 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 SCAF11Q99590 1463 aaKnown RBP5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 WDR7Q9Y4E6 1490 aa5.69□□□□□ -1.5
HDGFP1-201ENST00000405943 MSNP26038 577 aaKnown RBP5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 PDZRN4Q6ZMN7 1036 aaPredicted RBP5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 WDR63Q8IWG1 891 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 CHMP4BQ9H444 224 aaKnown RBP5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 COG6Q9Y2V7 657 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 MAGI2Q86UL8 1455 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 NLRP1Q9C000 1473 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 MRC2Q9UBG0 1479 aa5.68□□□□□ -1.5
HDGFP1-201ENST00000405943 UNC13BO14795 1591 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 PLB1Q6P1J6 1458 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 SEC24BO95487 1268 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 HSP90AB1P08238 724 aaKnown RBP5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 HS1BP3Q53T59 392 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 FTSJ3Q8IY81 847 aaKnown RBP5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 CCDC146Q8IYE0 955 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 PANK1Q8TE04 598 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 SNX21Q969T3 373 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 RUNDC1Q96C34 613 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 CFAP53Q96M91 514 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 ARXQ96QS3 562 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 PDZRN3Q9UPQ7 1066 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 KIF16BQ96L93 1317 aa5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 POLR3AO14802 1390 aaPredicted RBP5.67□□□□□ -1.5
HDGFP1-201ENST00000405943 HNRNPMP52272 730 aaKnown RBP eCLIP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 RARSP54136 660 aaKnown RBP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 MFAP1P55081 439 aaKnown RBP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 CALD1Q05682 793 aaKnown RBP5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 CSPP1Q1MSJ5 1256 aa5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 CCDC27Q2M243 656 aa5.66□□□□□ -1.5
HDGFP1-201ENST00000405943 ZKSCAN2Q63HK3 967 aa5.66□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms