RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 WASHC2AQ641Q2 1341 aa23.75■■□□□ 1.39
IRF1-202ENST00000405885 TMEM131LA2VDJ0 1609 aa23.75■■□□□ 1.39
IRF1-202ENST00000405885 GPRASP1Q5JY77 1395 aa23.74■■□□□ 1.39
IRF1-202ENST00000405885 CFAP70Q5T0N1 1121 aa23.74■■□□□ 1.39
IRF1-202ENST00000405885 PPLO60437 1756 aa23.73■■□□□ 1.39
IRF1-202ENST00000405885 ST20-MTHFSA0A0A6YYL1 179 aa23.73■■□□□ 1.39
IRF1-202ENST00000405885 STAC3Q96MF2 364 aa23.73■■□□□ 1.39
IRF1-202ENST00000405885 NEXMIFQ5QGS0 1516 aa23.72■■□□□ 1.39
IRF1-202ENST00000405885 FER1L4A9Z1Z3 1794 aa23.71■■□□□ 1.39
IRF1-202ENST00000405885 STAG3Q9UJ98 1225 aa23.71■■□□□ 1.39
IRF1-202ENST00000405885 NRXN1Q9ULB1 1477 aa23.7■■□□□ 1.39
IRF1-202ENST00000405885 RPGRIP1LQ68CZ1 1315 aa23.69■■□□□ 1.38
IRF1-202ENST00000405885 MIER1Q8N108 512 aa23.69■■□□□ 1.38
IRF1-202ENST00000405885 TNRQ92752 1358 aa23.69■■□□□ 1.38
IRF1-202ENST00000405885 PIK3C2GO75747 1445 aa23.67■■□□□ 1.38
IRF1-202ENST00000405885 C3P01024 1663 aa23.67■■□□□ 1.38
IRF1-202ENST00000405885 A2ML1A8K2U0 1454 aa23.66■■□□□ 1.38
IRF1-202ENST00000405885 KIF7Q2M1P5 1343 aa23.65■■□□□ 1.38
IRF1-202ENST00000405885 CCDC7Q96M83 1385 aa23.64■■□□□ 1.37
IRF1-202ENST00000405885 LAMC1P11047 1609 aa23.64■■□□□ 1.37
IRF1-202ENST00000405885 VGFO15240 615 aaPredicted RBP23.63■■□□□ 1.37
IRF1-202ENST00000405885 TMEM132EQ6IEE7 984 aa23.61■■□□□ 1.37
IRF1-202ENST00000405885 POLR3GLQ9BT43 218 aa23.61■■□□□ 1.37
IRF1-202ENST00000405885 KIAA1210Q9ULL0 1709 aa23.6■■□□□ 1.37
IRF1-202ENST00000405885 C14orf93Q9H972 538 aaKnown RBP23.6■■□□□ 1.37
IRF1-202ENST00000405885 RIMS1Q86UR5 1692 aaKnown RBP23.59■■□□□ 1.37
IRF1-202ENST00000405885 IQGAP1P46940 1657 aa23.58■■□□□ 1.36
IRF1-202ENST00000405885 TESK2Q96S53 571 aa23.58■■□□□ 1.36
IRF1-202ENST00000405885 SCAF11Q99590 1463 aaKnown RBP23.57■■□□□ 1.36
IRF1-202ENST00000405885 RIMS2Q9UQ26 1411 aa23.56■■□□□ 1.36
IRF1-202ENST00000405885 ZFYVE9O95405 1425 aa23.56■■□□□ 1.36
IRF1-202ENST00000405885 ADAMTSL3P82987 1691 aa23.55■■□□□ 1.36
IRF1-202ENST00000405885 ADGRB1O14514 1584 aa23.55■■□□□ 1.36
IRF1-202ENST00000405885 UBR1Q8IWV7 1749 aa23.53■■□□□ 1.36
IRF1-202ENST00000405885 POLR1AO95602 1720 aaPredicted RBP23.53■■□□□ 1.36
IRF1-202ENST00000405885 TRAK1Q9UPV9 953 aa23.52■■□□□ 1.36
IRF1-202ENST00000405885 DISP3Q9P2K9 1392 aa23.52■■□□□ 1.36
IRF1-202ENST00000405885 NLRP1Q9C000 1473 aa23.51■■□□□ 1.35
IRF1-202ENST00000405885 SETBP1Q9Y6X0 1596 aa23.5■■□□□ 1.35
IRF1-202ENST00000405885 TMEM2Q9UHN6 1383 aa23.49■■□□□ 1.35
IRF1-202ENST00000405885 ASXL1Q8IXJ9 1541 aa23.48■■□□□ 1.35
IRF1-202ENST00000405885 MYO3AQ8NEV4 1616 aa23.45■■□□□ 1.35
IRF1-202ENST00000405885 LTKP29376 864 aa23.45■■□□□ 1.35
IRF1-202ENST00000405885 STK26Q9P289 416 aa23.45■■□□□ 1.35
IRF1-202ENST00000405885 EIF3AQ14152 1382 aaKnown RBP23.45■■□□□ 1.34
IRF1-202ENST00000405885 ALKQ9UM73 1620 aa23.45■■□□□ 1.34
IRF1-202ENST00000405885 KDM5AP29375 1690 aaKnown RBP23.44■■□□□ 1.34
IRF1-202ENST00000405885 PTPRMP28827 1452 aa23.43■■□□□ 1.34
IRF1-202ENST00000405885 TMF1P82094 1093 aa23.42■■□□□ 1.34
IRF1-202ENST00000405885 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.42■■□□□ 1.34
IRF1-202ENST00000405885 NRXN3Q9Y4C0 1643 aa23.41■■□□□ 1.34
IRF1-202ENST00000405885 BCANQ96GW7 911 aa23.4■■□□□ 1.34
IRF1-202ENST00000405885 TXNDC2Q86VQ3 553 aa23.39■■□□□ 1.34
IRF1-202ENST00000405885 CENPJQ9HC77 1338 aaPredicted RBP23.39■■□□□ 1.34
IRF1-202ENST00000405885 SAFB2Q14151 953 aaKnown RBP eCLIP23.39■■□□□ 1.33
IRF1-202ENST00000405885 ANP32CO43423 234 aa23.37■■□□□ 1.33
IRF1-202ENST00000405885 CEP170BQ9Y4F5 1589 aaPredicted RBP23.37■■□□□ 1.33
IRF1-202ENST00000405885 YTHDC2Q9H6S0 1430 aaKnown RBP23.37■■□□□ 1.33
IRF1-202ENST00000405885 HDGFP51858 240 aaKnown RBP23.37■■□□□ 1.33
IRF1-202ENST00000405885 METP08581 1390 aa23.37■■□□□ 1.33
IRF1-202ENST00000405885 SETD1AO15047 1707 aaKnown RBP23.36■■□□□ 1.33
IRF1-202ENST00000405885 CNGB1Q14028 1251 aaPredicted RBP23.36■■□□□ 1.33
IRF1-202ENST00000405885 THEMISQ8N1K5 641 aaPredicted RBP23.36■■□□□ 1.33
IRF1-202ENST00000405885 ARHGEF28Q8N1W1 1705 aaKnown RBP23.35■■□□□ 1.33
IRF1-202ENST00000405885 SLIT1O75093 1534 aa23.34■■□□□ 1.33
IRF1-202ENST00000405885 ARHGAP23Q9P227 1491 aa23.34■■□□□ 1.33
IRF1-202ENST00000405885 QRICH2Q9H0J4 1663 aa23.33■■□□□ 1.33
IRF1-202ENST00000405885 EID1Q9Y6B2 187 aa23.32■■□□□ 1.32
IRF1-202ENST00000405885 PRAM1Q96QH2 718 aa23.32■■□□□ 1.32
IRF1-202ENST00000405885 SLC26A8Q96RN1 970 aa23.32■■□□□ 1.32
IRF1-202ENST00000405885 ADAMTS13Q76LX8 1427 aa23.32■■□□□ 1.32
IRF1-202ENST00000405885 PLEKHG1Q9ULL1 1385 aa23.3■■□□□ 1.32
IRF1-202ENST00000405885 SBNO2Q9Y2G9 1366 aa23.29■■□□□ 1.32
IRF1-202ENST00000405885 WAPLQ7Z5K2 1190 aa23.28■■□□□ 1.32
IRF1-202ENST00000405885 YTHDC1Q96MU7 727 aaKnown RBP23.28■■□□□ 1.32
IRF1-202ENST00000405885 LRPPRCP42704 1394 aaKnown RBP23.26■■□□□ 1.31
IRF1-202ENST00000405885 PLEKHH1Q9ULM0 1364 aa23.26■■□□□ 1.31
IRF1-202ENST00000405885 PANK3Q9H999 370 aa23.26■■□□□ 1.31
IRF1-202ENST00000405885 SETD1BQ9UPS6 1966 aaKnown RBP23.26■■□□□ 1.31
IRF1-202ENST00000405885 POGKQ9P215 609 aa23.26■■□□□ 1.31
IRF1-202ENST00000405885 PRKRIP1Q9H875 184 aaPredicted RBP23.25■■□□□ 1.31
IRF1-202ENST00000405885 ZNF142P52746 1687 aaPredicted RBP23.25■■□□□ 1.31
IRF1-202ENST00000405885 MINK1Q8N4C8 1332 aaPredicted RBP23.25■■□□□ 1.31
IRF1-202ENST00000405885 CDCA8Q53HL2 280 aa23.24■■□□□ 1.31
IRF1-202ENST00000405885 KDM4FA0A1W2PPD8 638 aa23.24■■□□□ 1.31
IRF1-202ENST00000405885 TULP4Q9NRJ4 1543 aa23.23■■□□□ 1.31
IRF1-202ENST00000405885 ABCC11Q96J66 1382 aa23.22■■□□□ 1.31
IRF1-202ENST00000405885 MED14O60244 1454 aa23.22■■□□□ 1.31
IRF1-202ENST00000405885 PER1O15534 1290 aaPredicted RBP23.22■■□□□ 1.31
IRF1-202ENST00000405885 MYOM1P52179 1685 aa23.22■■□□□ 1.31
IRF1-202ENST00000405885 CABP2Q9NPB3 220 aa23.2■■□□□ 1.3
IRF1-202ENST00000405885 SLC24A1O60721 1099 aa23.2■■□□□ 1.3
IRF1-202ENST00000405885 PTPRUQ92729 1446 aa23.19■■□□□ 1.3
IRF1-202ENST00000405885 ANKLE2Q86XL3 938 aa23.18■■□□□ 1.3
IRF1-202ENST00000405885 EVC2Q86UK5 1308 aa23.18■■□□□ 1.3
IRF1-202ENST00000405885 CCDC184Q52MB2 194 aa23.18■■□□□ 1.3
IRF1-202ENST00000405885 DLC1Q96QB1 1528 aa23.17■■□□□ 1.3
IRF1-202ENST00000405885 ROBO2Q9HCK4 1378 aa23.17■■□□□ 1.3
IRF1-202ENST00000405885 TMC1Q8TDI8 760 aa23.16■■□□□ 1.3
IRF1-202ENST00000405885 SLC12A5Q9H2X9 1139 aa23.16■■□□□ 1.3
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms