RNA–Protein interactions for RNA: ENST00000405885.6

IRF1-202, Transcript of interferon regulatory factor 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene IRF1, Length 2,061 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IRF1-202ENST00000405885 NISCHQ9Y2I1 1504 aa38.62■■■■□ 3.77
IRF1-202ENST00000405885 CCDC180Q9P1Z9 1646 aa33.61■■■□□ 2.97
IRF1-202ENST00000405885 ZCCHC6Q5VYS8 1495 aaKnown RBP32.4■■■□□ 2.78
IRF1-202ENST00000405885 ABCC9O60706 1549 aa32.17■■■□□ 2.74
IRF1-202ENST00000405885 DCAF8L2P0C7V8 631 aa32.15■■■□□ 2.74
IRF1-202ENST00000405885 DCAF1Q9Y4B6 1507 aa31.79■■■□□ 2.68
IRF1-202ENST00000405885 SHROOM4Q9ULL8 1493 aa31.63■■■□□ 2.65
IRF1-202ENST00000405885 MYO15BQ96JP2 1530 aa31.45■■■□□ 2.63
IRF1-202ENST00000405885 NACADO15069 1562 aa31.38■■■□□ 2.61
IRF1-202ENST00000405885 RB1CC1Q8TDY2 1594 aa31.16■■■□□ 2.58
IRF1-202ENST00000405885 SCRIBQ14160 1630 aa31.09■■■□□ 2.57
IRF1-202ENST00000405885 UNC13AQ9UPW8 1703 aa30.61■■■□□ 2.49
IRF1-202ENST00000405885 PABPN1Q86U42 306 aaKnown RBP eCLIP30.39■■■□□ 2.46
IRF1-202ENST00000405885 BICRAQ9NZM4 1560 aa30.33■■■□□ 2.45
IRF1-202ENST00000405885 SUPT5HO00267 1087 aaKnown RBP30.32■■■□□ 2.44
IRF1-202ENST00000405885 CECR2Q9BXF3 1484 aa30.14■■■□□ 2.42
IRF1-202ENST00000405885 RSF1Q96T23 1441 aaPredicted RBP29.95■■■□□ 2.39
IRF1-202ENST00000405885 MROH2BQ7Z745 1585 aa29.9■■■□□ 2.38
IRF1-202ENST00000405885 BAZ1AQ9NRL2 1556 aaPredicted RBP29.79■■■□□ 2.36
IRF1-202ENST00000405885 SMARCA4P51532 1647 aa29.71■■■□□ 2.35
IRF1-202ENST00000405885 WIZO95785 1651 aa29.65■■■□□ 2.34
IRF1-202ENST00000405885 EIF4G1Q04637 1599 aaKnown RBP29.42■■■□□ 2.3
IRF1-202ENST00000405885 PEG3Q9GZU2 1588 aa29.29■■■□□ 2.28
IRF1-202ENST00000405885 ATAD2BQ9ULI0 1458 aa29.29■■■□□ 2.28
IRF1-202ENST00000405885 TOP2AP11388 1531 aaKnown RBP29.24■■■□□ 2.27
IRF1-202ENST00000405885 SMARCA2P51531 1590 aa29.18■■■□□ 2.26
IRF1-202ENST00000405885 BAZ1BQ9UIG0 1483 aaKnown RBP29.11■■■□□ 2.25
IRF1-202ENST00000405885 CC2D2AQ9P2K1 1620 aa29.04■■■□□ 2.24
IRF1-202ENST00000405885 CCDC88BA6NC98 1476 aa29.02■■■□□ 2.24
IRF1-202ENST00000405885 NCAPD3P42695 1498 aa29.01■■■□□ 2.23
IRF1-202ENST00000405885 HMGXB3Q12766 1538 aa28.92■■■□□ 2.22
IRF1-202ENST00000405885 CHIC1Q5VXU3 224 aa28.86■■■□□ 2.21
IRF1-202ENST00000405885 DNAJC5BQ9UF47 199 aa28.62■■■□□ 2.17
IRF1-202ENST00000405885 ABCC8Q09428 1581 aa28.43■■■□□ 2.14
IRF1-202ENST00000405885 TRIM41Q8WV44 630 aa28.42■■■□□ 2.14
IRF1-202ENST00000405885 CFTRP13569 1480 aa28.36■■■□□ 2.13
IRF1-202ENST00000405885 CADPSQ9ULU8 1353 aa28.3■■■□□ 2.12
IRF1-202ENST00000405885 NESP48681 1621 aa28.23■■■□□ 2.11
IRF1-202ENST00000405885 WRNQ14191 1432 aaPredicted RBP eCLIP28.17■■■□□ 2.1
IRF1-202ENST00000405885 SYNJ1O43426 1573 aa28.1■■■□□ 2.09
IRF1-202ENST00000405885 PRDM2Q13029 1718 aa28.09■■■□□ 2.09
IRF1-202ENST00000405885 FAM9AQ8IZU1 332 aaPredicted RBP28.04■■■□□ 2.08
IRF1-202ENST00000405885 LAMC3Q9Y6N6 1575 aa28.01■■■□□ 2.08
IRF1-202ENST00000405885 FANCD2Q9BXW9 1451 aa28.01■■■□□ 2.07
IRF1-202ENST00000405885 CUX1P39880 1505 aa27.95■■■□□ 2.07
IRF1-202ENST00000405885 TOP2BQ02880 1626 aa27.92■■■□□ 2.06
IRF1-202ENST00000405885 SOGA1O94964 1423 aa27.87■■■□□ 2.05
IRF1-202ENST00000405885 LOC105371045A0A1W2PR82 267 aa27.87■■■□□ 2.05
IRF1-202ENST00000405885 BIVM-ERCC5R4GMW8 1640 aa27.86■■■□□ 2.05
IRF1-202ENST00000405885 PDS5BQ9NTI5 1447 aa27.84■■■□□ 2.05
IRF1-202ENST00000405885 CEP164Q9UPV0 1460 aa27.81■■■□□ 2.04
IRF1-202ENST00000405885 RUSC2Q8N2Y8 1516 aa27.81■■■□□ 2.04
IRF1-202ENST00000405885 KIF21AQ7Z4S6 1674 aa27.79■■■□□ 2.04
IRF1-202ENST00000405885 EHMT2Q96KQ7 1210 aa27.76■■■□□ 2.03
IRF1-202ENST00000405885 URB2Q14146 1524 aaKnown RBP27.69■■■□□ 2.02
IRF1-202ENST00000405885 TOPBP1Q92547 1522 aa27.68■■■□□ 2.02
IRF1-202ENST00000405885 DNMBPQ6XZF7 1577 aa27.67■■■□□ 2.02
IRF1-202ENST00000405885 FGD5Q6ZNL6 1462 aa27.66■■■□□ 2.02
IRF1-202ENST00000405885 CSRNP3Q8WYN3 585 aa27.56■■■□□ 2
IRF1-202ENST00000405885 POLA1P09884 1462 aaPredicted RBP27.56■■■□□ 2
IRF1-202ENST00000405885 EEA1Q15075 1411 aa27.55■■■□□ 2
IRF1-202ENST00000405885 ERCC6Q03468 1493 aa27.54■■■□□ 2
IRF1-202ENST00000405885 RAD54L2Q9Y4B4 1467 aa27.53■■■□□ 2
IRF1-202ENST00000405885 MRC2Q9UBG0 1479 aa27.5■■□□□ 1.99
IRF1-202ENST00000405885 CUX2O14529 1486 aa27.47■■□□□ 1.99
IRF1-202ENST00000405885 KIF27Q86VH2 1401 aa27.44■■□□□ 1.98
IRF1-202ENST00000405885 WDR62O43379 1518 aa27.36■■□□□ 1.97
IRF1-202ENST00000405885 ABCA10Q8WWZ4 1543 aa27.35■■□□□ 1.97
IRF1-202ENST00000405885 THOC2Q8NI27 1593 aaKnown RBP27.34■■□□□ 1.97
IRF1-202ENST00000405885 TDRD9Q8NDG6 1382 aaKnown RBP27.29■■□□□ 1.96
IRF1-202ENST00000405885 RAPGEF2Q9Y4G8 1499 aa27.28■■□□□ 1.96
IRF1-202ENST00000405885 IGF1RP08069 1367 aa27.27■■□□□ 1.96
IRF1-202ENST00000405885 WDR97A6NE52 1622 aa27.26■■□□□ 1.95
IRF1-202ENST00000405885 TARBP1Q13395 1621 aaKnown RBP27.26■■□□□ 1.95
IRF1-202ENST00000405885 KIF21BO75037 1637 aa27.26■■□□□ 1.95
IRF1-202ENST00000405885 GOLGA3Q08378 1498 aa27.26■■□□□ 1.95
IRF1-202ENST00000405885 UBTFP17480 764 aaKnown RBP27.26■■□□□ 1.95
IRF1-202ENST00000405885 PRXQ9BXM0 1461 aa27.24■■□□□ 1.95
IRF1-202ENST00000405885 ABCA5Q8WWZ7 1642 aa27.15■■□□□ 1.94
IRF1-202ENST00000405885 TNIKQ9UKE5 1360 aa27.14■■□□□ 1.94
IRF1-202ENST00000405885 GAPVD1Q14C86 1478 aa27.14■■□□□ 1.93
IRF1-202ENST00000405885 AQRO60306 1485 aaKnown RBP eCLIP27.13■■□□□ 1.931e-6■■■■■ 27.8
IRF1-202ENST00000405885 ZNF608Q9ULD9 1512 aaPredicted RBP27.13■■□□□ 1.93
IRF1-202ENST00000405885 IFT140Q96RY7 1462 aa27.12■■□□□ 1.93
IRF1-202ENST00000405885 CARMIL1Q5VZK9 1371 aa27.11■■□□□ 1.93
IRF1-202ENST00000405885 ERICH3Q5RHP9 1530 aa27.09■■□□□ 1.93
IRF1-202ENST00000405885 CEP162Q5TB80 1403 aa27.05■■□□□ 1.92
IRF1-202ENST00000405885 RANGAP1P46060 587 aaPredicted RBP27.02■■□□□ 1.92
IRF1-202ENST00000405885 EIF4G3O43432 1585 aaKnown RBP26.95■■□□□ 1.9
IRF1-202ENST00000405885 PBRM1Q86U86 1689 aa26.95■■□□□ 1.9
IRF1-202ENST00000405885 CUL7Q14999 1698 aa26.95■■□□□ 1.9
IRF1-202ENST00000405885 GRIN2BQ13224 1484 aa26.91■■□□□ 1.9
IRF1-202ENST00000405885 CLIP1P30622 1438 aa26.87■■□□□ 1.89
IRF1-202ENST00000405885 SNAPC4Q5SXM2 1469 aa26.82■■□□□ 1.88
IRF1-202ENST00000405885 ADAMTS12P58397 1594 aa26.81■■□□□ 1.88
IRF1-202ENST00000405885 FHAD1B1AJZ9 1412 aa26.8■■□□□ 1.88
IRF1-202ENST00000405885 MAGI1Q96QZ7 1491 aaPredicted RBP26.67■■□□□ 1.86
IRF1-202ENST00000405885 ARHGAP35Q9NRY4 1499 aa26.66■■□□□ 1.86
IRF1-202ENST00000405885 FBLN2P98095 1184 aa26.66■■□□□ 1.86
IRF1-202ENST00000405885 PPARGC1BQ86YN6 1023 aaKnown RBP26.66■■□□□ 1.86
Retrieved 100 of 20,778 RNA–protein pairs in 7.3 ms