RNA–Protein interactions for RNA: ENST00000405240.5

RTN4-209, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,061 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-209ENST00000405240 EFCAB2Q5VUJ9 269 aa5.23□□□□□ -1.57
RTN4-209ENST00000405240 SHPRHQ149N8 1683 aa5.23□□□□□ -1.57
RTN4-209ENST00000405240 ZNF518AQ6AHZ1 1483 aa5.23□□□□□ -1.57
RTN4-209ENST00000405240 ASXL1Q8IXJ9 1541 aa5.22□□□□□ -1.57
RTN4-209ENST00000405240 FANCAO15360 1455 aa5.22□□□□□ -1.57
RTN4-209ENST00000405240 PIK3C2GO75747 1445 aa5.22□□□□□ -1.57
RTN4-209ENST00000405240 HECW2Q9P2P5 1572 aa5.22□□□□□ -1.57
RTN4-209ENST00000405240 KDM2AQ9Y2K7 1162 aa5.22□□□□□ -1.57
RTN4-209ENST00000405240 SIGLEC1Q9BZZ2 1709 aa5.21□□□□□ -1.57
RTN4-209ENST00000405240 ZNF326Q5BKZ1 582 aaKnown RBP5.21□□□□□ -1.58
RTN4-209ENST00000405240 TMC1Q8TDI8 760 aa5.21□□□□□ -1.58
RTN4-209ENST00000405240 VIRMAQ69YN4 1812 aaKnown RBP5.21□□□□□ -1.58
RTN4-209ENST00000405240 ZNF521Q96K83 1311 aa5.21□□□□□ -1.58
RTN4-209ENST00000405240 SBNO2Q9Y2G9 1366 aa5.21□□□□□ -1.58
RTN4-209ENST00000405240 ERVK-7P63135 1459 aa5.21□□□□□ -1.58
RTN4-209ENST00000405240 QRICH2Q9H0J4 1663 aa5.21□□□□□ -1.58
RTN4-209ENST00000405240 ADGRB1O14514 1584 aa5.21□□□□□ -1.58
RTN4-209ENST00000405240 B4GALNT3Q6L9W6 998 aa5.2□□□□□ -1.58
RTN4-209ENST00000405240 CAMSAP1Q5T5Y3 1602 aa5.2□□□□□ -1.58
RTN4-209ENST00000405240 MLH3Q9UHC1 1453 aa5.2□□□□□ -1.58
RTN4-209ENST00000405240 RRP1P56182 461 aaKnown RBP5.2□□□□□ -1.58
RTN4-209ENST00000405240 ARHGEF28Q8N1W1 1705 aaKnown RBP5.2□□□□□ -1.58
RTN4-209ENST00000405240 ADGRL1O94910 1474 aa5.2□□□□□ -1.58
RTN4-209ENST00000405240 TMF1P82094 1093 aa5.19□□□□□ -1.58
RTN4-209ENST00000405240 AMER1Q5JTC6 1135 aaPredicted RBP5.19□□□□□ -1.58
RTN4-209ENST00000405240 UGGT1Q9NYU2 1555 aa5.19□□□□□ -1.58
RTN4-209ENST00000405240 SPAG9O60271 1321 aaKnown RBP5.19□□□□□ -1.58
RTN4-209ENST00000405240 RICTORQ6R327 1708 aa5.19□□□□□ -1.58
RTN4-209ENST00000405240 PANK3Q9H999 370 aa5.19□□□□□ -1.58
RTN4-209ENST00000405240 ASXL2Q76L83 1435 aa5.18□□□□□ -1.58
RTN4-209ENST00000405240 TRMT2AQ8IZ69 625 aaKnown RBP5.18□□□□□ -1.58
RTN4-209ENST00000405240 ANKRD26Q9UPS8 1709 aa5.18□□□□□ -1.58
RTN4-209ENST00000405240 SENP3Q9H4L4 574 aaPredicted RBP5.18□□□□□ -1.58
RTN4-209ENST00000405240 CLTCQ00610 1675 aaKnown RBP5.18□□□□□ -1.58
RTN4-209ENST00000405240 POGZQ7Z3K3 1410 aa5.18□□□□□ -1.58
RTN4-209ENST00000405240 ABCC3O15438 1527 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 RCAN3Q9UKA8 241 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 EIF3AQ14152 1382 aaKnown RBP5.17□□□□□ -1.58
RTN4-209ENST00000405240 NEXMIFQ5QGS0 1516 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 AFAP1Q8N556 730 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 KANK1Q14678 1352 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 PPP2R1AP30153 589 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 RGL3Q3MIN7 710 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 NOS1P29475 1434 aa5.17□□□□□ -1.58
RTN4-209ENST00000405240 GRWD1Q9BQ67 446 aaKnown RBP eCLIP5.16□□□□□ -1.58
RTN4-209ENST00000405240 DIP2CQ9Y2E4 1556 aa5.16□□□□□ -1.58
RTN4-209ENST00000405240 PLEKHH1Q9ULM0 1364 aa5.16□□□□□ -1.58
RTN4-209ENST00000405240 IQSEC2Q5JU85 1478 aa5.16□□□□□ -1.58
RTN4-209ENST00000405240 SLC24A1O60721 1099 aa5.16□□□□□ -1.58
RTN4-209ENST00000405240 GLI2P10070 1586 aa5.16□□□□□ -1.58
RTN4-209ENST00000405240 MYO5BQ9ULV0 1848 aa5.16□□□□□ -1.58
RTN4-209ENST00000405240 CDCA8Q53HL2 280 aa5.16□□□□□ -1.58
RTN4-209ENST00000405240 ARHGAP31Q2M1Z3 1444 aa5.15□□□□□ -1.58
RTN4-209ENST00000405240 MS4A1P11836 297 aa5.15□□□□□ -1.58
RTN4-209ENST00000405240 NEO1Q92859 1461 aa5.15□□□□□ -1.58
RTN4-209ENST00000405240 ADGRB2O60241 1585 aa5.15□□□□□ -1.58
RTN4-209ENST00000405240 KDM2BQ8NHM5 1336 aa5.15□□□□□ -1.58
RTN4-209ENST00000405240 NPATQ14207 1427 aa5.15□□□□□ -1.58
RTN4-209ENST00000405240 ZFYVE9O95405 1425 aa5.15□□□□□ -1.59
RTN4-209ENST00000405240 EXOC6Q8TAG9 804 aa5.15□□□□□ -1.59
RTN4-209ENST00000405240 CDCA7LQ96GN5 454 aa5.15□□□□□ -1.59
RTN4-209ENST00000405240 CCDC136Q96JN2 1154 aa5.15□□□□□ -1.59
RTN4-209ENST00000405240 PREX1Q8TCU6 1659 aa5.15□□□□□ -1.59
RTN4-209ENST00000405240 POLR3AO14802 1390 aaPredicted RBP5.14□□□□□ -1.59
RTN4-209ENST00000405240 TCERG1O14776 1098 aaKnown RBP5.14□□□□□ -1.59
RTN4-209ENST00000405240 DUSP27Q5VZP5 1158 aa5.14□□□□□ -1.59
RTN4-209ENST00000405240 PUS7Q96PZ0 661 aaKnown RBP5.14□□□□□ -1.59
RTN4-209ENST00000405240 POLR3GLQ9BT43 218 aa5.14□□□□□ -1.59
RTN4-209ENST00000405240 SETD1AO15047 1707 aaKnown RBP5.14□□□□□ -1.59
RTN4-209ENST00000405240 TMEM131LA2VDJ0 1609 aa5.14□□□□□ -1.59
RTN4-209ENST00000405240 NCBP3Q53F19 620 aaKnown RBP5.14□□□□□ -1.59
RTN4-209ENST00000405240 ADAMTS8Q9UP79 889 aa5.14□□□□□ -1.59
RTN4-209ENST00000405240 TULP4Q9NRJ4 1543 aa5.14□□□□□ -1.59
RTN4-209ENST00000405240 REREQ9P2R6 1566 aa5.14□□□□□ -1.59
RTN4-209ENST00000405240 CC2D1BQ5T0F9 858 aaKnown RBP5.13□□□□□ -1.59
RTN4-209ENST00000405240 NGEFQ8N5V2 710 aa5.13□□□□□ -1.59
RTN4-209ENST00000405240 MYT1LQ9UL68 1186 aa5.13□□□□□ -1.59
RTN4-209ENST00000405240 RPGRIP1LQ68CZ1 1315 aa5.13□□□□□ -1.59
RTN4-209ENST00000405240 ADGRF5Q8IZF2 1346 aa5.13□□□□□ -1.59
RTN4-209ENST00000405240 SLFN5Q08AF3 891 aa5.13□□□□□ -1.59
RTN4-209ENST00000405240 IPO9Q96P70 1041 aaKnown RBP5.13□□□□□ -1.59
RTN4-209ENST00000405240 CARD14Q9BXL6 1004 aa5.13□□□□□ -1.59
RTN4-209ENST00000405240 BACH2Q9BYV9 841 aa5.13□□□□□ -1.59
RTN4-209ENST00000405240 C14orf93Q9H972 538 aaKnown RBP5.13□□□□□ -1.59
RTN4-209ENST00000405240 NKTRP30414 1462 aaKnown RBP5.12□□□□□ -1.59
RTN4-209ENST00000405240 KNSTRNQ9Y448 316 aa5.12□□□□□ -1.59
RTN4-209ENST00000405240 KIF20BQ96Q89 1820 aa5.12□□□□□ -1.59
RTN4-209ENST00000405240 NOP58Q9Y2X3 529 aaKnown RBP5.12□□□□□ -1.59
RTN4-209ENST00000405240 CFAP65Q6ZU64 1925 aaKnown RBP5.12□□□□□ -1.59
RTN4-209ENST00000405240 MED14O60244 1454 aa5.11□□□□□ -1.59
RTN4-209ENST00000405240 CDC42BPGQ6DT37 1551 aa5.11□□□□□ -1.59
RTN4-209ENST00000405240 CD109Q6YHK3 1445 aa5.11□□□□□ -1.59
RTN4-209ENST00000405240 KIF3BO15066 747 aa5.11□□□□□ -1.59
RTN4-209ENST00000405240 PAK3O75914 559 aaPredicted RBP5.11□□□□□ -1.59
RTN4-209ENST00000405240 CFAP70Q5T0N1 1121 aa5.11□□□□□ -1.59
RTN4-209ENST00000405240 COL3A1P02461 1466 aaPredicted RBP5.11□□□□□ -1.59
RTN4-209ENST00000405240 NINLQ9Y2I6 1382 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 CRBNQ96SW2 442 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 RIMBP3CA6NJZ7 1639 aa5.1□□□□□ -1.59
RTN4-209ENST00000405240 RIMBP3BA6NNM3 1639 aa5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 14.1 ms