RNA–Protein interactions for RNA: ENST00000404909.5

RTN4-208, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,102 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-208ENST00000404909 PIK3C2BO00750 1634 aa5.19□□□□□ -1.58
RTN4-208ENST00000404909 SPATA31D1Q6ZQQ2 1576 aa5.18□□□□□ -1.58
RTN4-208ENST00000404909 C11orf95C9JLR9 678 aaPredicted RBP5.18□□□□□ -1.58
RTN4-208ENST00000404909 TMEM132EQ6IEE7 984 aa5.18□□□□□ -1.58
RTN4-208ENST00000404909 BCANQ96GW7 911 aa5.18□□□□□ -1.58
RTN4-208ENST00000404909 WASHC2AQ641Q2 1341 aa5.18□□□□□ -1.58
RTN4-208ENST00000404909 FER1L4A9Z1Z3 1794 aa5.18□□□□□ -1.58
RTN4-208ENST00000404909 MADDQ8WXG6 1647 aa5.18□□□□□ -1.58
RTN4-208ENST00000404909 NEURL4Q96JN8 1562 aa5.17□□□□□ -1.58
RTN4-208ENST00000404909 TRPM1Q7Z4N2 1603 aa5.17□□□□□ -1.58
RTN4-208ENST00000404909 MYOM2P54296 1465 aa5.17□□□□□ -1.58
RTN4-208ENST00000404909 TMEM131LA2VDJ0 1609 aa5.17□□□□□ -1.58
RTN4-208ENST00000404909 GPRASP1Q5JY77 1395 aa5.17□□□□□ -1.58
RTN4-208ENST00000404909 A2ML1A8K2U0 1454 aa5.17□□□□□ -1.58
RTN4-208ENST00000404909 C14orf93Q9H972 538 aaKnown RBP5.17□□□□□ -1.58
RTN4-208ENST00000404909 TRAK1Q9UPV9 953 aa5.17□□□□□ -1.58
RTN4-208ENST00000404909 STK26Q9P289 416 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 KIF7Q2M1P5 1343 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 PIK3C2GO75747 1445 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 RIMS2Q9UQ26 1411 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 NEXMIFQ5QGS0 1516 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 MYO5BQ9ULV0 1848 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 HDGFP51858 240 aaKnown RBP5.16□□□□□ -1.58
RTN4-208ENST00000404909 MIER1Q8N108 512 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 C3P01024 1663 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 RIMS1Q86UR5 1692 aaKnown RBP5.16□□□□□ -1.58
RTN4-208ENST00000404909 NRXN1Q9ULB1 1477 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 CCDC7Q96M83 1385 aa5.16□□□□□ -1.58
RTN4-208ENST00000404909 ABCF1Q8NE71 845 aaKnown RBP eCLIP5.16□□□□□ -1.58
RTN4-208ENST00000404909 PPLO60437 1756 aa5.15□□□□□ -1.58
RTN4-208ENST00000404909 TXNDC2Q86VQ3 553 aa5.15□□□□□ -1.58
RTN4-208ENST00000404909 TMEM2Q9UHN6 1383 aa5.15□□□□□ -1.58
RTN4-208ENST00000404909 CNGB1Q14028 1251 aaPredicted RBP5.15□□□□□ -1.59
RTN4-208ENST00000404909 SAFB2Q14151 953 aaKnown RBP eCLIP5.15□□□□□ -1.598e-8■■■□□ 19.2
RTN4-208ENST00000404909 THEMISQ8N1K5 641 aaPredicted RBP5.15□□□□□ -1.59
RTN4-208ENST00000404909 EID1Q9Y6B2 187 aa5.15□□□□□ -1.59
RTN4-208ENST00000404909 SCAF11Q99590 1463 aaKnown RBP5.15□□□□□ -1.59
RTN4-208ENST00000404909 NLRP1Q9C000 1473 aa5.15□□□□□ -1.59
RTN4-208ENST00000404909 EIF3AQ14152 1382 aaKnown RBP5.15□□□□□ -1.59
RTN4-208ENST00000404909 IFT172Q9UG01 1749 aa5.15□□□□□ -1.59
RTN4-208ENST00000404909 LTKP29376 864 aa5.15□□□□□ -1.59
RTN4-208ENST00000404909 TESK2Q96S53 571 aa5.15□□□□□ -1.59
RTN4-208ENST00000404909 ZFYVE9O95405 1425 aa5.14□□□□□ -1.59
RTN4-208ENST00000404909 TMF1P82094 1093 aa5.14□□□□□ -1.59
RTN4-208ENST00000404909 ADAMTSL3P82987 1691 aa5.14□□□□□ -1.59
RTN4-208ENST00000404909 SLC26A8Q96RN1 970 aa5.13□□□□□ -1.59
RTN4-208ENST00000404909 DISP3Q9P2K9 1392 aa5.13□□□□□ -1.59
RTN4-208ENST00000404909 CENPJQ9HC77 1338 aaPredicted RBP5.13□□□□□ -1.59
RTN4-208ENST00000404909 ANP32CO43423 234 aa5.13□□□□□ -1.59
RTN4-208ENST00000404909 POGKQ9P215 609 aa5.13□□□□□ -1.59
RTN4-208ENST00000404909 PTPRMP28827 1452 aa5.13□□□□□ -1.59
RTN4-208ENST00000404909 UBR1Q8IWV7 1749 aa5.12□□□□□ -1.59
RTN4-208ENST00000404909 KIAA1210Q9ULL0 1709 aa5.12□□□□□ -1.59
RTN4-208ENST00000404909 LAMC1P11047 1609 aa5.12□□□□□ -1.59
RTN4-208ENST00000404909 PRAM1Q96QH2 718 aa5.12□□□□□ -1.59
RTN4-208ENST00000404909 ADGRB1O14514 1584 aa5.12□□□□□ -1.59
RTN4-208ENST00000404909 ALKQ9UM73 1620 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 YTHDC2Q9H6S0 1430 aaKnown RBP5.11□□□□□ -1.59
RTN4-208ENST00000404909 METP08581 1390 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 CDCA8Q53HL2 280 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 WAPLQ7Z5K2 1190 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 ANKLE2Q86XL3 938 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 MYO3AQ8NEV4 1616 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 SETBP1Q9Y6X0 1596 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 SETD1BQ9UPS6 1966 aaKnown RBP5.11□□□□□ -1.59
RTN4-208ENST00000404909 CEP170BQ9Y4F5 1589 aaPredicted RBP5.11□□□□□ -1.59
RTN4-208ENST00000404909 KDM4FA0A1W2PPD8 638 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 IQGAP1P46940 1657 aa5.11□□□□□ -1.59
RTN4-208ENST00000404909 MINK1Q8N4C8 1332 aaPredicted RBP5.11□□□□□ -1.59
RTN4-208ENST00000404909 PLEKHG1Q9ULL1 1385 aa5.1□□□□□ -1.59
RTN4-208ENST00000404909 TMC1Q8TDI8 760 aa5.1□□□□□ -1.59
RTN4-208ENST00000404909 ASXL1Q8IXJ9 1541 aa5.1□□□□□ -1.59
RTN4-208ENST00000404909 SLC24A1O60721 1099 aa5.1□□□□□ -1.59
RTN4-208ENST00000404909 YTHDC1Q96MU7 727 aaKnown RBP5.1□□□□□ -1.59
RTN4-208ENST00000404909 PANK3Q9H999 370 aa5.1□□□□□ -1.59
RTN4-208ENST00000404909 KDM5AP29375 1690 aaKnown RBP5.1□□□□□ -1.59
RTN4-208ENST00000404909 SRPK2P78362 688 aaKnown RBP5.09□□□□□ -1.59
RTN4-208ENST00000404909 CABP2Q9NPB3 220 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 SLIT1O75093 1534 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 LRPPRCP42704 1394 aaKnown RBP5.09□□□□□ -1.59
RTN4-208ENST00000404909 ARHGAP23Q9P227 1491 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 EVC2Q86UK5 1308 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 ADAMTS13Q76LX8 1427 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 HSPA2P54652 639 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 NCKAP5LQ9HCH0 1330 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 AMOTL2Q9Y2J4 779 aa5.09□□□□□ -1.59
RTN4-208ENST00000404909 PLEKHH1Q9ULM0 1364 aa5.09□□□□□ -1.6
RTN4-208ENST00000404909 TBX22Q9Y458 520 aa5.08□□□□□ -1.6
RTN4-208ENST00000404909 ABCC11Q96J66 1382 aa5.08□□□□□ -1.6
RTN4-208ENST00000404909 NRXN3Q9Y4C0 1643 aa5.08□□□□□ -1.6
RTN4-208ENST00000404909 SBNO2Q9Y2G9 1366 aa5.08□□□□□ -1.6
RTN4-208ENST00000404909 SLC12A5Q9H2X9 1139 aa5.08□□□□□ -1.6
RTN4-208ENST00000404909 PRKRIP1Q9H875 184 aaPredicted RBP5.08□□□□□ -1.6
RTN4-208ENST00000404909 POLR1AO95602 1720 aaPredicted RBP5.08□□□□□ -1.6
RTN4-208ENST00000404909 CC2D1BQ5T0F9 858 aaKnown RBP5.08□□□□□ -1.6
RTN4-208ENST00000404909 CDK19Q9BWU1 502 aa5.08□□□□□ -1.6
RTN4-208ENST00000404909 KNSTRNQ9Y448 316 aa5.08□□□□□ -1.6
RTN4-208ENST00000404909 ROBO2Q9HCK4 1378 aa5.07□□□□□ -1.6
RTN4-208ENST00000404909 ARHGEF28Q8N1W1 1705 aaKnown RBP5.07□□□□□ -1.6
RTN4-208ENST00000404909 QRICH2Q9H0J4 1663 aa5.07□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms