RNA–Protein interactions for RNA: ENST00000403276.7

CSNK1D-205, Transcript of casein kinase 1 delta, humanhuman

TSL 2

Gene CSNK1D, Length 1,040 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSNK1D-205ENST00000403276 ZFYVE9O95405 1425 aa25.29■■□□□ 1.64
CSNK1D-205ENST00000403276 LRRC7Q96NW7 1537 aa25.27■■□□□ 1.64
CSNK1D-205ENST00000403276 NUTM2DQ5VT03 806 aaPredicted RBP25.27■■□□□ 1.64
CSNK1D-205ENST00000403276 PPP1R15AO75807 674 aaPredicted RBP25.25■■□□□ 1.63
CSNK1D-205ENST00000403276 HDGFP51858 240 aaKnown RBP25.24■■□□□ 1.63
CSNK1D-205ENST00000403276 XIRP1Q702N8 1843 aaKnown RBP25.23■■□□□ 1.63
CSNK1D-205ENST00000403276 SCAF1Q9H7N4 1312 aaKnown RBP25.22■■□□□ 1.63
CSNK1D-205ENST00000403276 TOM1O60784 492 aa25.22■■□□□ 1.63
CSNK1D-205ENST00000403276 PIP4K2BP78356 416 aa25.22■■□□□ 1.63
CSNK1D-205ENST00000403276 PLEKHG1Q9ULL1 1385 aa25.2■■□□□ 1.63
CSNK1D-205ENST00000403276 ABCF1Q8NE71 845 aaKnown RBP eCLIP25.2■■□□□ 1.62
CSNK1D-205ENST00000403276 SLC4A1APQ9BWU0 796 aaKnown RBP25.2■■□□□ 1.62
CSNK1D-205ENST00000403276 CLTCL1P53675 1640 aa25.19■■□□□ 1.62
CSNK1D-205ENST00000403276 KCNA6P17658 529 aa25.18■■□□□ 1.62
CSNK1D-205ENST00000403276 ALKQ9UM73 1620 aa25.17■■□□□ 1.62
CSNK1D-205ENST00000403276 TRPM2O94759 1503 aa25.17■■□□□ 1.62
CSNK1D-205ENST00000403276 ZNF326Q5BKZ1 582 aaKnown RBP25.16■■□□□ 1.62
CSNK1D-205ENST00000403276 KIF1BO60333 1816 aa25.16■■□□□ 1.62
CSNK1D-205ENST00000403276 CHD2O14647 1828 aaKnown RBP25.15■■□□□ 1.62
CSNK1D-205ENST00000403276 RBM33Q96EV2 1170 aaKnown RBP25.15■■□□□ 1.62
CSNK1D-205ENST00000403276 FOXD1Q16676 465 aa25.14■■□□□ 1.62
CSNK1D-205ENST00000403276 PROSER2Q86WR7 435 aaPredicted RBP25.13■■□□□ 1.61
CSNK1D-205ENST00000403276 TBX22Q9Y458 520 aa25.12■■□□□ 1.61
CSNK1D-205ENST00000403276 ADAMTS13Q76LX8 1427 aa25.11■■□□□ 1.61
CSNK1D-205ENST00000403276 NWD1Q149M9 1564 aa25.1■■□□□ 1.61
CSNK1D-205ENST00000403276 TMEM94Q12767 1356 aa25.1■■□□□ 1.61
CSNK1D-205ENST00000403276 HSPA1LP34931 641 aa25.08■■□□□ 1.61
CSNK1D-205ENST00000403276 MPHOSPH9Q99550 1183 aa25.08■■□□□ 1.61
CSNK1D-205ENST00000403276 SETD5Q9C0A6 1442 aa25.07■■□□□ 1.6
CSNK1D-205ENST00000403276 NKTRP30414 1462 aaKnown RBP25.05■■□□□ 1.6
CSNK1D-205ENST00000403276 NEXMIFQ5QGS0 1516 aa25.05■■□□□ 1.6
CSNK1D-205ENST00000403276 NRXN3Q9Y4C0 1643 aa25.04■■□□□ 1.6
CSNK1D-205ENST00000403276 DIP2AQ14689 1571 aa25.04■■□□□ 1.6
CSNK1D-205ENST00000403276 PTPRUQ92729 1446 aa24.99■■□□□ 1.59
CSNK1D-205ENST00000403276 RAB3GAP2Q9H2M9 1393 aa24.99■■□□□ 1.59
CSNK1D-205ENST00000403276 SETBP1Q9Y6X0 1596 aa24.99■■□□□ 1.59
CSNK1D-205ENST00000403276 PIK3R4Q99570 1358 aa24.98■■□□□ 1.59
CSNK1D-205ENST00000403276 AMOTL2Q9Y2J4 779 aa24.98■■□□□ 1.59
CSNK1D-205ENST00000403276 DISP3Q9P2K9 1392 aa24.96■■□□□ 1.59
CSNK1D-205ENST00000403276 PPLO60437 1756 aa24.95■■□□□ 1.59
CSNK1D-205ENST00000403276 METP08581 1390 aa24.94■■□□□ 1.58
CSNK1D-205ENST00000403276 MSH6P52701 1360 aa24.94■■□□□ 1.58
CSNK1D-205ENST00000403276 CCDC144AA2RUR9 1427 aa24.94■■□□□ 1.58
CSNK1D-205ENST00000403276 VGFO15240 615 aaPredicted RBP24.93■■□□□ 1.58
CSNK1D-205ENST00000403276 RGL3Q3MIN7 710 aa24.92■■□□□ 1.58
CSNK1D-205ENST00000403276 C14orf37Q86TY3 774 aa24.92■■□□□ 1.58
CSNK1D-205ENST00000403276 RPGRIP1LQ68CZ1 1315 aa24.91■■□□□ 1.58
CSNK1D-205ENST00000403276 ACIN1Q9UKV3 1341 aaKnown RBP24.91■■□□□ 1.58
CSNK1D-205ENST00000403276 ILDR2Q71H61 639 aa24.91■■□□□ 1.58
CSNK1D-205ENST00000403276 XRN1Q8IZH2 1706 aaKnown RBP24.9■■□□□ 1.58
CSNK1D-205ENST00000403276 ROBO1Q9Y6N7 1651 aa24.89■■□□□ 1.58
CSNK1D-205ENST00000403276 SIPA1L2Q9P2F8 1722 aaPredicted RBP24.89■■□□□ 1.57
CSNK1D-205ENST00000403276 FAM135BQ49AJ0 1406 aa24.88■■□□□ 1.57
CSNK1D-205ENST00000403276 NCOA3Q9Y6Q9 1424 aa24.87■■□□□ 1.57
CSNK1D-205ENST00000403276 SETD1AO15047 1707 aaKnown RBP24.87■■□□□ 1.57
CSNK1D-205ENST00000403276 SLAIN2Q9P270 581 aa24.87■■□□□ 1.57
CSNK1D-205ENST00000403276 SPATA31E1Q6ZUB1 1445 aa24.86■■□□□ 1.57
CSNK1D-205ENST00000403276 IFT172Q9UG01 1749 aa24.84■■□□□ 1.57
CSNK1D-205ENST00000403276 C19orf44Q9H6X5 657 aa24.84■■□□□ 1.57
CSNK1D-205ENST00000403276 ADGRF5Q8IZF2 1346 aa24.84■■□□□ 1.57
CSNK1D-205ENST00000403276 ATF3P18847 181 aa24.8■■□□□ 1.56
CSNK1D-205ENST00000403276 MED1Q15648 1581 aaPredicted RBP24.8■■□□□ 1.56
CSNK1D-205ENST00000403276 CADPS2Q86UW7 1296 aa24.78■■□□□ 1.56
CSNK1D-205ENST00000403276 HRCP23327 699 aa24.77■■□□□ 1.56
CSNK1D-205ENST00000403276 ANKRD30BQ9BXX2 1392 aa24.76■■□□□ 1.55
CSNK1D-205ENST00000403276 PHLPP1O60346 1717 aa24.75■■□□□ 1.55
CSNK1D-205ENST00000403276 NALCNQ8IZF0 1738 aa24.74■■□□□ 1.55
CSNK1D-205ENST00000403276 ROBO2Q9HCK4 1378 aa24.73■■□□□ 1.55
CSNK1D-205ENST00000403276 ADGRL3Q9HAR2 1447 aa24.7■■□□□ 1.55
CSNK1D-205ENST00000403276 TMEM132EQ6IEE7 984 aa24.7■■□□□ 1.54
CSNK1D-205ENST00000403276 PTCH1Q13635 1447 aa24.69■■□□□ 1.54
CSNK1D-205ENST00000403276 STK26Q9P289 416 aa24.69■■□□□ 1.54
CSNK1D-205ENST00000403276 DCCP43146 1447 aa24.69■■□□□ 1.54
CSNK1D-205ENST00000403276 PIK3C2GO75747 1445 aa24.68■■□□□ 1.54
CSNK1D-205ENST00000403276 BRINP3Q76B58 766 aa24.67■■□□□ 1.54
CSNK1D-205ENST00000403276 MST1RQ04912 1400 aa24.67■■□□□ 1.54
CSNK1D-205ENST00000403276 ASXL1Q8IXJ9 1541 aa24.66■■□□□ 1.54
CSNK1D-205ENST00000403276 COL16A1Q07092 1604 aaPredicted RBP24.64■■□□□ 1.54
CSNK1D-205ENST00000403276 PRAG1Q86YV5 1406 aa24.64■■□□□ 1.54
CSNK1D-205ENST00000403276 SOCS7O14512 581 aa24.64■■□□□ 1.54
CSNK1D-205ENST00000403276 PHF23Q9BUL5 403 aaPredicted RBP24.64■■□□□ 1.54
CSNK1D-205ENST00000403276 CFAP70Q5T0N1 1121 aa24.63■■□□□ 1.53
CSNK1D-205ENST00000403276 WAPLQ7Z5K2 1190 aa24.62■■□□□ 1.53
CSNK1D-205ENST00000403276 C14orf93Q9H972 538 aaKnown RBP24.62■■□□□ 1.53
CSNK1D-205ENST00000403276 KDM2AQ9Y2K7 1162 aa24.62■■□□□ 1.53
CSNK1D-205ENST00000403276 MYOM2P54296 1465 aa24.62■■□□□ 1.53
CSNK1D-205ENST00000403276 NRXN1Q9ULB1 1477 aa24.62■■□□□ 1.53
CSNK1D-205ENST00000403276 AHDC1Q5TGY3 1603 aaPredicted RBP24.61■■□□□ 1.53
CSNK1D-205ENST00000403276 LRPPRCP42704 1394 aaKnown RBP24.61■■□□□ 1.53
CSNK1D-205ENST00000403276 KNDC1Q76NI1 1749 aa24.59■■□□□ 1.53
CSNK1D-205ENST00000403276 JCADQ9P266 1359 aa24.58■■□□□ 1.53
CSNK1D-205ENST00000403276 DCAF11Q8TEB1 546 aa24.58■■□□□ 1.53
CSNK1D-205ENST00000403276 DDX17Q92841 729 aaKnown RBP24.58■■□□□ 1.53
CSNK1D-205ENST00000403276 YTHDC2Q9H6S0 1430 aaKnown RBP24.58■■□□□ 1.53
CSNK1D-205ENST00000403276 ABCC11Q96J66 1382 aa24.57■■□□□ 1.52
CSNK1D-205ENST00000403276 TECPR2O15040 1411 aa24.57■■□□□ 1.52
CSNK1D-205ENST00000403276 C1orf167Q5SNV9 1468 aa24.57■■□□□ 1.52
CSNK1D-205ENST00000403276 PLEKHH1Q9ULM0 1364 aa24.56■■□□□ 1.52
CSNK1D-205ENST00000403276 LAMC1P11047 1609 aa24.56■■□□□ 1.52
CSNK1D-205ENST00000403276 NHSL1Q5SYE7 1610 aa24.55■■□□□ 1.52
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms