RNA–Protein interactions for RNA: ENST00000402813.7

CNGA1-202, Transcript of cyclic nucleotide gated channel alpha 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CNGA1, Length 2,867 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNGA1-202ENST00000402813 WRNQ14191 1432 aaPredicted RBP eCLIP7.43□□□□□ -1.22
CNGA1-202ENST00000402813 U2SURPO15042 1029 aaKnown RBP7.43□□□□□ -1.22
CNGA1-202ENST00000402813 PAX3P23760 479 aa7.43□□□□□ -1.22
CNGA1-202ENST00000402813 DNAJC14Q6Y2X3 702 aaPredicted RBP7.43□□□□□ -1.22
CNGA1-202ENST00000402813 ABCF1Q8NE71 845 aaKnown RBP eCLIP7.43□□□□□ -1.22
CNGA1-202ENST00000402813 BAZ1AQ9NRL2 1556 aaPredicted RBP7.42□□□□□ -1.22
CNGA1-202ENST00000402813 GTF2E1P29083 439 aaPredicted RBP7.42□□□□□ -1.22
CNGA1-202ENST00000402813 CACNB1Q02641 598 aaPredicted RBP7.42□□□□□ -1.22
CNGA1-202ENST00000402813 FAN1Q9Y2M0 1017 aa7.42□□□□□ -1.22
CNGA1-202ENST00000402813 E2F4Q16254 413 aa7.42□□□□□ -1.22
CNGA1-202ENST00000402813 CASC1Q6TDU7 716 aa7.42□□□□□ -1.22
CNGA1-202ENST00000402813 VTI1AQ96AJ9 217 aa7.42□□□□□ -1.22
CNGA1-202ENST00000402813 C4orf46Q504U0 113 aa7.41□□□□□ -1.22
CNGA1-202ENST00000402813 WDR3Q9UNX4 943 aaKnown RBP eCLIP7.41□□□□□ -1.22
CNGA1-202ENST00000402813 ANP32CO43423 234 aa7.41□□□□□ -1.22
CNGA1-202ENST00000402813 GPIHBP1Q8IV16 184 aa7.41□□□□□ -1.22
CNGA1-202ENST00000402813 PLCD3Q8N3E9 789 aa7.41□□□□□ -1.22
CNGA1-202ENST00000402813 SPOCK3Q9BQ16 436 aa7.41□□□□□ -1.22
CNGA1-202ENST00000402813 GNEQ9Y223 722 aaKnown RBP7.41□□□□□ -1.22
CNGA1-202ENST00000402813 AXDND1Q5T1B0 1012 aaPredicted RBP7.41□□□□□ -1.22
CNGA1-202ENST00000402813 PBXIP1Q96AQ6 731 aa7.41□□□□□ -1.22
CNGA1-202ENST00000402813 VAMP1P23763 118 aa7.4□□□□□ -1.22
CNGA1-202ENST00000402813 CCDC85AQ96PX6 553 aaPredicted RBP7.4□□□□□ -1.22
CNGA1-202ENST00000402813 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP7.4□□□□□ -1.22
CNGA1-202ENST00000402813 COG6Q9Y2V7 657 aa7.4□□□□□ -1.22
CNGA1-202ENST00000402813 ZNF330Q9Y3S2 320 aaPredicted RBP7.4□□□□□ -1.22
CNGA1-202ENST00000402813 COMMD10Q9Y6G5 202 aa7.4□□□□□ -1.22
CNGA1-202ENST00000402813 EGFLAMQ63HQ2 1017 aa7.4□□□□□ -1.23
CNGA1-202ENST00000402813 PNISRQ8TF01 805 aaKnown RBP7.4□□□□□ -1.23
CNGA1-202ENST00000402813 PCMTD1Q96MG8 357 aaPredicted RBP7.4□□□□□ -1.23
CNGA1-202ENST00000402813 YTHDC1Q96MU7 727 aaKnown RBP7.4□□□□□ -1.23
CNGA1-202ENST00000402813 HOXD11P31277 338 aaPredicted RBP7.39□□□□□ -1.23
CNGA1-202ENST00000402813 IGBP1P78318 339 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 KCNB2Q92953 911 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 SENP7Q9BQF6 1050 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 STAG3Q9UJ98 1225 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 TMA7Q9Y2S6 64 aaKnown RBP7.39□□□□□ -1.23
CNGA1-202ENST00000402813 NRDCO43847 1150 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 NBPF20Q3BBV1 942 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 MKL1Q969V6 931 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 TSPAN18Q96SJ8 248 aa7.39□□□□□ -1.23
CNGA1-202ENST00000402813 RSF1Q96T23 1441 aaPredicted RBP7.39□□□□□ -1.23
CNGA1-202ENST00000402813 CSB-PGBD3P0DP91 1061 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 SSFA2P28290 1259 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 PPP4CP60510 307 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 CXorf38Q8TB03 319 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 GNL3LQ9NVN8 582 aaKnown RBP7.38□□□□□ -1.23
CNGA1-202ENST00000402813 NUB1Q9Y5A7 615 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 STK24Q9Y6E0 443 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 TLDC2A0PJX2 215 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 PTPROQ16827 1216 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 HSP90AB2PQ58FF8 381 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 CHPF2Q9P2E5 772 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 KIF4AO95239 1232 aa7.38□□□□□ -1.23
CNGA1-202ENST00000402813 AMOTL1Q8IY63 956 aa7.37□□□□□ -1.23
CNGA1-202ENST00000402813 CEP120Q8N960 986 aa7.37□□□□□ -1.23
CNGA1-202ENST00000402813 hCG_2014768A0A024R1R8 64 aa7.37□□□□□ -1.23
CNGA1-202ENST00000402813 CARNS1A5YM72 827 aa7.37□□□□□ -1.23
CNGA1-202ENST00000402813 EPB41L2O43491 1005 aaKnown RBP7.37□□□□□ -1.23
CNGA1-202ENST00000402813 GYS2P54840 703 aa7.37□□□□□ -1.23
CNGA1-202ENST00000402813 PEG3Q9GZU2 1588 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 ZRANB2O95218 330 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNGA1-202ENST00000402813 BDNFP23560 247 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 PDAP1Q13442 181 aaKnown RBP7.36□□□□□ -1.23
CNGA1-202ENST00000402813 TBC1D2Q9BYX2 928 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 BRINP2Q9C0B6 783 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 SH3BP1Q9Y3L3 701 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 CDCA8Q53HL2 280 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 PABPN1Q86U42 306 aaKnown RBP eCLIP7.36□□□□□ -1.23
CNGA1-202ENST00000402813 SPACA7Q96KW9 195 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 ARHGEF10LQ9HCE6 1279 aa7.36□□□□□ -1.23
CNGA1-202ENST00000402813 RHBDL3P58872 404 aa7.35□□□□□ -1.23
CNGA1-202ENST00000402813 SRPK2P78362 688 aaKnown RBP7.35□□□□□ -1.23
CNGA1-202ENST00000402813 SETDB1Q15047 1291 aa7.35□□□□□ -1.23
CNGA1-202ENST00000402813 NOM1Q5C9Z4 860 aaKnown RBP7.35□□□□□ -1.23
CNGA1-202ENST00000402813 PARP9Q8IXQ6 854 aa7.35□□□□□ -1.23
CNGA1-202ENST00000402813 HELBQ8NG08 1087 aaPredicted RBP7.35□□□□□ -1.23
CNGA1-202ENST00000402813 CCER1Q8TC90 406 aaPredicted RBP7.35□□□□□ -1.23
CNGA1-202ENST00000402813 SGIP1Q9BQI5 828 aa7.35□□□□□ -1.23
CNGA1-202ENST00000402813 C11orf96Q7Z7L8 435 aa7.34□□□□□ -1.23
CNGA1-202ENST00000402813 CUEDC1Q9NWM3 386 aaPredicted RBP7.34□□□□□ -1.23
CNGA1-202ENST00000402813 AMHR2Q16671 573 aa7.34□□□□□ -1.23
CNGA1-202ENST00000402813 CSPP1Q1MSJ5 1256 aa7.34□□□□□ -1.23
CNGA1-202ENST00000402813 ZNF280DQ6N043 979 aa7.34□□□□□ -1.23
CNGA1-202ENST00000402813 STAC3Q96MF2 364 aa7.34□□□□□ -1.23
CNGA1-202ENST00000402813 COPB2P35606 906 aa7.34□□□□□ -1.24
CNGA1-202ENST00000402813 NPAS4Q8IUM7 802 aa7.34□□□□□ -1.24
CNGA1-202ENST00000402813 SCYL1Q96KG9 808 aa7.34□□□□□ -1.24
CNGA1-202ENST00000402813 BCL2L13Q9BXK5 485 aa7.34□□□□□ -1.24
CNGA1-202ENST00000402813 VRTNQ9H8Y1 702 aa7.34□□□□□ -1.24
CNGA1-202ENST00000402813 ZNF500O60304 480 aaPredicted RBP7.33□□□□□ -1.24
CNGA1-202ENST00000402813 CNGB1Q14028 1251 aaPredicted RBP7.33□□□□□ -1.24
CNGA1-202ENST00000402813 LNPKQ9C0E8 428 aa7.33□□□□□ -1.24
CNGA1-202ENST00000402813 SDE2Q6IQ49 451 aa7.33□□□□□ -1.24
CNGA1-202ENST00000402813 QTRT2Q9H974 415 aaKnown RBP7.33□□□□□ -1.24
CNGA1-202ENST00000402813 CFAP69A5D8W1 941 aa7.32□□□□□ -1.24
CNGA1-202ENST00000402813 BSDC1Q9NW68 430 aaPredicted RBP7.32□□□□□ -1.24
CNGA1-202ENST00000402813 GABBR1Q9UBS5 961 aa7.32□□□□□ -1.24
CNGA1-202ENST00000402813 SWAP70Q9UH65 585 aa7.32□□□□□ -1.24
CNGA1-202ENST00000402813 IGF1RP08069 1367 aa7.32□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 13.1 ms