RNA–Protein interactions for RNA: ENST00000402802.7

PDGFA-203, Transcript of platelet derived growth factor subunit A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDGFA, Length 2,305 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFA-203ENST00000402802 REREQ9P2R6 1566 aa21.7■■□□□ 1.06
PDGFA-203ENST00000402802 ST20-MTHFSA0A0A6YYL1 179 aa21.69■■□□□ 1.06
PDGFA-203ENST00000402802 POLR3GLQ9BT43 218 aa21.69■■□□□ 1.06
PDGFA-203ENST00000402802 ARID4BQ4LE39 1312 aaPredicted RBP21.69■■□□□ 1.06
PDGFA-203ENST00000402802 NOS1P29475 1434 aa21.69■■□□□ 1.06
PDGFA-203ENST00000402802 CNTLNQ9NXG0 1405 aa21.69■■□□□ 1.06
PDGFA-203ENST00000402802 AGLP35573 1532 aa21.69■■□□□ 1.06
PDGFA-203ENST00000402802 SYNMO15061 1565 aa21.69■■□□□ 1.06
PDGFA-203ENST00000402802 KIF1BO60333 1816 aa21.68■■□□□ 1.06
PDGFA-203ENST00000402802 CCDC7Q96M83 1385 aa21.68■■□□□ 1.06
PDGFA-203ENST00000402802 ZC3H13Q5T200 1668 aaKnown RBP21.68■■□□□ 1.06
PDGFA-203ENST00000402802 KIF7Q2M1P5 1343 aa21.67■■□□□ 1.06
PDGFA-203ENST00000402802 ADGRF5Q8IZF2 1346 aa21.67■■□□□ 1.06
PDGFA-203ENST00000402802 MADDQ8WXG6 1647 aa21.66■■□□□ 1.06
PDGFA-203ENST00000402802 NUTM2DQ5VT03 806 aaPredicted RBP21.66■■□□□ 1.06
PDGFA-203ENST00000402802 ARHGAP31Q2M1Z3 1444 aa21.66■■□□□ 1.06
PDGFA-203ENST00000402802 IDI1Q13907 227 aa21.65■■□□□ 1.06
PDGFA-203ENST00000402802 SENP3Q9H4L4 574 aaPredicted RBP21.64■■□□□ 1.06
PDGFA-203ENST00000402802 CLTCQ00610 1675 aaKnown RBP21.64■■□□□ 1.06
PDGFA-203ENST00000402802 ADGRB3O60242 1522 aa21.64■■□□□ 1.05
PDGFA-203ENST00000402802 GPRASP1Q5JY77 1395 aa21.62■■□□□ 1.05
PDGFA-203ENST00000402802 NBR1Q14596 966 aa21.61■■□□□ 1.05
PDGFA-203ENST00000402802 CFAP70Q5T0N1 1121 aa21.61■■□□□ 1.05
PDGFA-203ENST00000402802 PREX1Q8TCU6 1659 aa21.61■■□□□ 1.05
PDGFA-203ENST00000402802 PIK3C2BO00750 1634 aa21.59■■□□□ 1.05
PDGFA-203ENST00000402802 NEURL4Q96JN8 1562 aa21.58■■□□□ 1.05
PDGFA-203ENST00000402802 PAK3O75914 559 aaPredicted RBP21.58■■□□□ 1.04
PDGFA-203ENST00000402802 ERVK-7P63135 1459 aa21.57■■□□□ 1.04
PDGFA-203ENST00000402802 IFT172Q9UG01 1749 aa21.57■■□□□ 1.04
PDGFA-203ENST00000402802 ESF1Q9H501 851 aaKnown RBP21.56■■□□□ 1.04
PDGFA-203ENST00000402802 SALL2Q9Y467 1007 aaPredicted RBP21.56■■□□□ 1.04
PDGFA-203ENST00000402802 MYOM2P54296 1465 aa21.55■■□□□ 1.04
PDGFA-203ENST00000402802 PPP6R1Q9UPN7 881 aa21.55■■□□□ 1.04
PDGFA-203ENST00000402802 SLC52A1Q9NWF4 448 aa21.54■■□□□ 1.04
PDGFA-203ENST00000402802 RTL5Q5HYW3 569 aaPredicted RBP21.53■■□□□ 1.04
PDGFA-203ENST00000402802 ZMYM3Q14202 1370 aa21.53■■□□□ 1.04
PDGFA-203ENST00000402802 B4GALNT3Q6L9W6 998 aa21.52■■□□□ 1.04
PDGFA-203ENST00000402802 PLPPR3Q6T4P5 718 aa21.52■■□□□ 1.04
PDGFA-203ENST00000402802 STAC3Q96MF2 364 aa21.52■■□□□ 1.04
PDGFA-203ENST00000402802 CNGB1Q14028 1251 aaPredicted RBP21.52■■□□□ 1.04
PDGFA-203ENST00000402802 PPLO60437 1756 aa21.52■■□□□ 1.03
PDGFA-203ENST00000402802 POLR1AO95602 1720 aaPredicted RBP21.51■■□□□ 1.03
PDGFA-203ENST00000402802 MYO5BQ9ULV0 1848 aa21.51■■□□□ 1.03
PDGFA-203ENST00000402802 LAMC1P11047 1609 aa21.51■■□□□ 1.03
PDGFA-203ENST00000402802 TESK2Q96S53 571 aa21.51■■□□□ 1.03
PDGFA-203ENST00000402802 NRXN1Q9ULB1 1477 aa21.49■■□□□ 1.03
PDGFA-203ENST00000402802 IPO9Q96P70 1041 aaKnown RBP21.49■■□□□ 1.03
PDGFA-203ENST00000402802 STAG3Q9UJ98 1225 aa21.49■■□□□ 1.03
PDGFA-203ENST00000402802 NEXMIFQ5QGS0 1516 aa21.48■■□□□ 1.03
PDGFA-203ENST00000402802 DISP3Q9P2K9 1392 aa21.48■■□□□ 1.03
PDGFA-203ENST00000402802 CEBPAP49715 358 aaPredicted RBP21.48■■□□□ 1.03
PDGFA-203ENST00000402802 TMEM132EQ6IEE7 984 aa21.48■■□□□ 1.03
PDGFA-203ENST00000402802 TMEM131LA2VDJ0 1609 aa21.47■■□□□ 1.03
PDGFA-203ENST00000402802 RPGRIP1LQ68CZ1 1315 aa21.47■■□□□ 1.03
PDGFA-203ENST00000402802 PIK3C2GO75747 1445 aa21.47■■□□□ 1.03
PDGFA-203ENST00000402802 ANP32AP39687 249 aaKnown RBP21.46■■□□□ 1.03
PDGFA-203ENST00000402802 IQGAP1P46940 1657 aa21.46■■□□□ 1.03
PDGFA-203ENST00000402802 SPATA31D1Q6ZQQ2 1576 aa21.46■■□□□ 1.03
PDGFA-203ENST00000402802 SCAF11Q99590 1463 aaKnown RBP21.45■■□□□ 1.03
PDGFA-203ENST00000402802 UBE2Q2Q8WVN8 375 aa21.45■■□□□ 1.02
PDGFA-203ENST00000402802 KIAA1210Q9ULL0 1709 aa21.43■■□□□ 1.02
PDGFA-203ENST00000402802 VGFO15240 615 aaPredicted RBP21.43■■□□□ 1.02
PDGFA-203ENST00000402802 C14orf93Q9H972 538 aaKnown RBP21.43■■□□□ 1.02
PDGFA-203ENST00000402802 ZBTB47Q9UFB7 747 aaPredicted RBP21.42■■□□□ 1.02
PDGFA-203ENST00000402802 ZBED9Q6R2W3 1325 aa21.42■■□□□ 1.02
PDGFA-203ENST00000402802 TRAK1Q9UPV9 953 aa21.41■■□□□ 1.02
PDGFA-203ENST00000402802 IL27Q8NEV9 243 aa21.4■■□□□ 1.02
PDGFA-203ENST00000402802 TMF1P82094 1093 aa21.39■■□□□ 1.01
PDGFA-203ENST00000402802 A2ML1A8K2U0 1454 aa21.38■■□□□ 1.01
PDGFA-203ENST00000402802 TNRQ92752 1358 aa21.37■■□□□ 1.01
PDGFA-203ENST00000402802 ADGRB1O14514 1584 aa21.37■■□□□ 1.01
PDGFA-203ENST00000402802 PRKRIP1Q9H875 184 aaPredicted RBP21.36■■□□□ 1.01
PDGFA-203ENST00000402802 CCDC184Q52MB2 194 aa21.35■■□□□ 1.01
PDGFA-203ENST00000402802 EIF3AQ14152 1382 aaKnown RBP21.34■■□□□ 1.01
PDGFA-203ENST00000402802 STK26Q9P289 416 aa21.33■■□□□ 1.01
PDGFA-203ENST00000402802 RIMS2Q9UQ26 1411 aa21.32■■□□□ 1
PDGFA-203ENST00000402802 SETBP1Q9Y6X0 1596 aa21.32■■□□□ 1
PDGFA-203ENST00000402802 FER1L4A9Z1Z3 1794 aa21.31■■□□□ 1
PDGFA-203ENST00000402802 USP35Q9P2H5 1018 aa21.31■■□□□ 1
PDGFA-203ENST00000402802 ZFYVE9O95405 1425 aa21.31■■□□□ 1
PDGFA-203ENST00000402802 CCDC136Q96JN2 1154 aa21.3■■□□□ 1
PDGFA-203ENST00000402802 ASXL1Q8IXJ9 1541 aa21.3■■□□□ 1
PDGFA-203ENST00000402802 SAFB2Q14151 953 aaKnown RBP eCLIP21.3■■□□□ 1
PDGFA-203ENST00000402802 CENPJQ9HC77 1338 aaPredicted RBP21.29■■□□□ 1
PDGFA-203ENST00000402802 C3P01024 1663 aa21.29■■□□□ 1
PDGFA-203ENST00000402802 PANK3Q9H999 370 aa21.28■■□□□ 1
PDGFA-203ENST00000402802 SMG6Q86US8 1419 aaKnown RBP21.27■□□□□ 0.99
PDGFA-203ENST00000402802 RNF123Q5XPI4 1314 aa21.26■□□□□ 0.99
PDGFA-203ENST00000402802 FAM9BQ8IZU0 186 aa21.26■□□□□ 0.99
PDGFA-203ENST00000402802 RTN4Q9NQC3 1192 aaKnown RBP21.25■□□□□ 0.99
PDGFA-203ENST00000402802 ALKQ9UM73 1620 aa21.24■□□□□ 0.99
PDGFA-203ENST00000402802 MRS2Q9HD23 443 aa21.23■□□□□ 0.99
PDGFA-203ENST00000402802 PER1O15534 1290 aaPredicted RBP21.23■□□□□ 0.99
PDGFA-203ENST00000402802 PTPRMP28827 1452 aa21.22■□□□□ 0.99
PDGFA-203ENST00000402802 MYO3AQ8NEV4 1616 aa21.22■□□□□ 0.99
PDGFA-203ENST00000402802 UBR1Q8IWV7 1749 aa21.22■□□□□ 0.99
PDGFA-203ENST00000402802 QRICH2Q9H0J4 1663 aa21.21■□□□□ 0.99
PDGFA-203ENST00000402802 ARHGEF28Q8N1W1 1705 aaKnown RBP21.2■□□□□ 0.98
PDGFA-203ENST00000402802 CC2D1BQ5T0F9 858 aaKnown RBP21.2■□□□□ 0.98
PDGFA-203ENST00000402802 TMEM2Q9UHN6 1383 aa21.2■□□□□ 0.98
Retrieved 100 of 20,778 RNA–protein pairs in 11.5 ms