RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 STAG3Q9UJ98 1225 aa22.16■■□□□ 1.14
CHRFAM7A-203ENST00000401522 A2ML1A8K2U0 1454 aa22.15■■□□□ 1.14
CHRFAM7A-203ENST00000401522 UBR1Q8IWV7 1749 aa22.14■■□□□ 1.13
CHRFAM7A-203ENST00000401522 RPGRIP1LQ68CZ1 1315 aa22.13■■□□□ 1.13
CHRFAM7A-203ENST00000401522 CEP170BQ9Y4F5 1589 aaPredicted RBP22.13■■□□□ 1.13
CHRFAM7A-203ENST00000401522 MYO5BQ9ULV0 1848 aa22.12■■□□□ 1.13
CHRFAM7A-203ENST00000401522 ZNF142P52746 1687 aaPredicted RBP22.12■■□□□ 1.13
CHRFAM7A-203ENST00000401522 UHRF1BP1Q6BDS2 1440 aa22.12■■□□□ 1.13
CHRFAM7A-203ENST00000401522 ZNF326Q5BKZ1 582 aaKnown RBP22.12■■□□□ 1.13
CHRFAM7A-203ENST00000401522 MYT1Q01538 1121 aa22.11■■□□□ 1.13
CHRFAM7A-203ENST00000401522 THEMISQ8N1K5 641 aaPredicted RBP22.1■■□□□ 1.13
CHRFAM7A-203ENST00000401522 DCAF11Q8TEB1 546 aa22.1■■□□□ 1.13
CHRFAM7A-203ENST00000401522 STAC3Q96MF2 364 aa22.1■■□□□ 1.13
CHRFAM7A-203ENST00000401522 TMEM2Q9UHN6 1383 aa22.07■■□□□ 1.12
CHRFAM7A-203ENST00000401522 NEXMIFQ5QGS0 1516 aa22.06■■□□□ 1.12
CHRFAM7A-203ENST00000401522 IFT172Q9UG01 1749 aa22.06■■□□□ 1.12
CHRFAM7A-203ENST00000401522 HSPA5P11021 654 aaKnown RBP22.06■■□□□ 1.12
CHRFAM7A-203ENST00000401522 PPLO60437 1756 aa22.05■■□□□ 1.12
CHRFAM7A-203ENST00000401522 KDM2AQ9Y2K7 1162 aa22.05■■□□□ 1.12
CHRFAM7A-203ENST00000401522 EIF4G2P78344 907 aaKnown RBP eCLIP22.04■■□□□ 1.12
CHRFAM7A-203ENST00000401522 SLIT1O75093 1534 aa22.04■■□□□ 1.12
CHRFAM7A-203ENST00000401522 ZFYVE9O95405 1425 aa22.04■■□□□ 1.12
CHRFAM7A-203ENST00000401522 VGFO15240 615 aaPredicted RBP22.04■■□□□ 1.12
CHRFAM7A-203ENST00000401522 HDGFP51858 240 aaKnown RBP22.04■■□□□ 1.12
CHRFAM7A-203ENST00000401522 RIMS2Q9UQ26 1411 aa22.03■■□□□ 1.12
CHRFAM7A-203ENST00000401522 MYOM2P54296 1465 aa22.03■■□□□ 1.12
CHRFAM7A-203ENST00000401522 ARHGAP23Q9P227 1491 aa22.03■■□□□ 1.12
CHRFAM7A-203ENST00000401522 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.02■■□□□ 1.12
CHRFAM7A-203ENST00000401522 WASHC2AQ641Q2 1341 aa22.01■■□□□ 1.11
CHRFAM7A-203ENST00000401522 NRXN1Q9ULB1 1477 aa22■■□□□ 1.11
CHRFAM7A-203ENST00000401522 NEFLP07196 543 aa21.99■■□□□ 1.11
CHRFAM7A-203ENST00000401522 NUTM2DQ5VT03 806 aaPredicted RBP21.99■■□□□ 1.11
CHRFAM7A-203ENST00000401522 ADGRF5Q8IZF2 1346 aa21.99■■□□□ 1.11
CHRFAM7A-203ENST00000401522 LMTK3Q96Q04 1460 aa21.99■■□□□ 1.11
CHRFAM7A-203ENST00000401522 FKBP8Q14318 412 aa21.98■■□□□ 1.11
CHRFAM7A-203ENST00000401522 PRAG1Q86YV5 1406 aa21.98■■□□□ 1.11
CHRFAM7A-203ENST00000401522 EID1Q9Y6B2 187 aa21.98■■□□□ 1.11
CHRFAM7A-203ENST00000401522 LTKP29376 864 aa21.97■■□□□ 1.11
CHRFAM7A-203ENST00000401522 NBPF8Q3BBV2 869 aa21.97■■□□□ 1.11
CHRFAM7A-203ENST00000401522 TXNDC2Q86VQ3 553 aa21.97■■□□□ 1.11
CHRFAM7A-203ENST00000401522 PIK3C2GO75747 1445 aa21.94■■□□□ 1.1
CHRFAM7A-203ENST00000401522 ANKLE2Q86XL3 938 aa21.94■■□□□ 1.1
CHRFAM7A-203ENST00000401522 TSHZ2Q9NRE2 1034 aa21.94■■□□□ 1.1
CHRFAM7A-203ENST00000401522 SCAF11Q99590 1463 aaKnown RBP21.93■■□□□ 1.1
CHRFAM7A-203ENST00000401522 CCDC7Q96M83 1385 aa21.91■■□□□ 1.1
CHRFAM7A-203ENST00000401522 PLEKHG1Q9ULL1 1385 aa21.91■■□□□ 1.1
CHRFAM7A-203ENST00000401522 HSPA2P54652 639 aa21.9■■□□□ 1.1
CHRFAM7A-203ENST00000401522 C14orf93Q9H972 538 aaKnown RBP21.89■■□□□ 1.09
CHRFAM7A-203ENST00000401522 SETBP1Q9Y6X0 1596 aa21.88■■□□□ 1.09
CHRFAM7A-203ENST00000401522 TRPM1Q7Z4N2 1603 aa21.87■■□□□ 1.09
CHRFAM7A-203ENST00000401522 CFAP70Q5T0N1 1121 aa21.87■■□□□ 1.09
CHRFAM7A-203ENST00000401522 KIAA1210Q9ULL0 1709 aa21.87■■□□□ 1.09
CHRFAM7A-203ENST00000401522 MED14O60244 1454 aa21.86■■□□□ 1.09
CHRFAM7A-203ENST00000401522 BCANQ96GW7 911 aa21.86■■□□□ 1.09
CHRFAM7A-203ENST00000401522 RALGAPBQ86X10 1494 aa21.86■■□□□ 1.09
CHRFAM7A-203ENST00000401522 NRXN3Q9Y4C0 1643 aa21.85■■□□□ 1.09
CHRFAM7A-203ENST00000401522 POLR1AO95602 1720 aaPredicted RBP21.85■■□□□ 1.09
CHRFAM7A-203ENST00000401522 NCKAP5LQ9HCH0 1330 aa21.85■■□□□ 1.09
CHRFAM7A-203ENST00000401522 LAMC1P11047 1609 aa21.84■■□□□ 1.09
CHRFAM7A-203ENST00000401522 NBPF1Q3BBV0 1214 aa21.84■■□□□ 1.09
CHRFAM7A-203ENST00000401522 ALKQ9UM73 1620 aa21.84■■□□□ 1.09
CHRFAM7A-203ENST00000401522 HNRNPUQ00839 825 aaKnown RBP eCLIP21.83■■□□□ 1.09
CHRFAM7A-203ENST00000401522 ADAMTS13Q76LX8 1427 aa21.83■■□□□ 1.08
CHRFAM7A-203ENST00000401522 SENP3Q9H4L4 574 aaPredicted RBP21.82■■□□□ 1.08
CHRFAM7A-203ENST00000401522 IQGAP1P46940 1657 aa21.82■■□□□ 1.08
CHRFAM7A-203ENST00000401522 ROCK2O75116 1388 aaKnown RBP21.82■■□□□ 1.08
CHRFAM7A-203ENST00000401522 GPRASP1Q5JY77 1395 aa21.82■■□□□ 1.08
CHRFAM7A-203ENST00000401522 NPHP4O75161 1426 aaPredicted RBP21.81■■□□□ 1.08
CHRFAM7A-203ENST00000401522 C11orf95C9JLR9 678 aaPredicted RBP21.81■■□□□ 1.08
CHRFAM7A-203ENST00000401522 AEBP2Q6ZN18 517 aaPredicted RBP21.81■■□□□ 1.08
CHRFAM7A-203ENST00000401522 TBX22Q9Y458 520 aa21.8■■□□□ 1.08
CHRFAM7A-203ENST00000401522 SETD1AO15047 1707 aaKnown RBP21.79■■□□□ 1.08
CHRFAM7A-203ENST00000401522 STRCQ7RTU9 1775 aa21.79■■□□□ 1.08
CHRFAM7A-203ENST00000401522 ADGRB1O14514 1584 aa21.78■■□□□ 1.08
CHRFAM7A-203ENST00000401522 SLC26A8Q96RN1 970 aa21.78■■□□□ 1.08
CHRFAM7A-203ENST00000401522 PRKRIP1Q9H875 184 aaPredicted RBP21.78■■□□□ 1.08
CHRFAM7A-203ENST00000401522 DIP2AQ14689 1571 aa21.78■■□□□ 1.08
CHRFAM7A-203ENST00000401522 CARD11Q9BXL7 1154 aa21.77■■□□□ 1.08
CHRFAM7A-203ENST00000401522 KIF7Q2M1P5 1343 aa21.77■■□□□ 1.07
CHRFAM7A-203ENST00000401522 TMEM132EQ6IEE7 984 aa21.76■■□□□ 1.07
CHRFAM7A-203ENST00000401522 METP08581 1390 aa21.75■■□□□ 1.07
CHRFAM7A-203ENST00000401522 ASXL1Q8IXJ9 1541 aa21.75■■□□□ 1.07
CHRFAM7A-203ENST00000401522 PIK3R4Q99570 1358 aa21.72■■□□□ 1.07
CHRFAM7A-203ENST00000401522 YTHDC2Q9H6S0 1430 aaKnown RBP21.71■■□□□ 1.07
CHRFAM7A-203ENST00000401522 DMRT2Q9Y5R5 561 aa21.7■■□□□ 1.06
CHRFAM7A-203ENST00000401522 LRPPRCP42704 1394 aaKnown RBP21.69■■□□□ 1.06
CHRFAM7A-203ENST00000401522 ABCC11Q96J66 1382 aa21.68■■□□□ 1.06
CHRFAM7A-203ENST00000401522 CCDC184Q52MB2 194 aa21.68■■□□□ 1.06
CHRFAM7A-203ENST00000401522 MRS2Q9HD23 443 aa21.68■■□□□ 1.06
CHRFAM7A-203ENST00000401522 USP47Q96K76 1375 aa21.67■■□□□ 1.06
CHRFAM7A-203ENST00000401522 ERICH6BQ5W0A0 696 aa21.67■■□□□ 1.06
CHRFAM7A-203ENST00000401522 PTPRUQ92729 1446 aa21.67■■□□□ 1.06
CHRFAM7A-203ENST00000401522 TRAK1Q9UPV9 953 aa21.67■■□□□ 1.06
CHRFAM7A-203ENST00000401522 STK26Q9P289 416 aa21.66■■□□□ 1.06
CHRFAM7A-203ENST00000401522 TECPR2O15040 1411 aa21.65■■□□□ 1.06
CHRFAM7A-203ENST00000401522 AMOTL2Q9Y2J4 779 aa21.65■■□□□ 1.06
CHRFAM7A-203ENST00000401522 CHD2O14647 1828 aaKnown RBP21.64■■□□□ 1.06
CHRFAM7A-203ENST00000401522 SIRT1Q96EB6 747 aa21.64■■□□□ 1.05
CHRFAM7A-203ENST00000401522 ZBED9Q6R2W3 1325 aa21.64■■□□□ 1.05
CHRFAM7A-203ENST00000401522 EIF3AQ14152 1382 aaKnown RBP21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 11.9 ms