RNA–Protein interactions for RNA: ENST00000400908.6

RERE-204, Transcript of arginine-glutamic acid dipeptide repeats, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene RERE, Length 5,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RERE-204ENST00000400908 MYOM3Q5VTT5 1437 aa16.97■□□□□ 0.31
RERE-204ENST00000400908 TOPBP1Q92547 1522 aa16.97■□□□□ 0.31
RERE-204ENST00000400908 STK11IPQ8N1F8 1099 aa16.96■□□□□ 0.31
RERE-204ENST00000400908 GRIN2BQ13224 1484 aa16.96■□□□□ 0.3
RERE-204ENST00000400908 CNKSR2Q8WXI2 1034 aa16.96■□□□□ 0.3
RERE-204ENST00000400908 STK26Q9P289 416 aa16.96■□□□□ 0.3
RERE-204ENST00000400908 PRDM2Q13029 1718 aa16.95■□□□□ 0.3
RERE-204ENST00000400908 TRHP20396 242 aaPredicted RBP16.95■□□□□ 0.3
RERE-204ENST00000400908 TCEAL9Q9UHQ7 104 aa16.94■□□□□ 0.3
RERE-204ENST00000400908 HSP90AB3PQ58FF7 597 aa16.94■□□□□ 0.3
RERE-204ENST00000400908 POLA1P09884 1462 aaPredicted RBP16.93■□□□□ 0.3
RERE-204ENST00000400908 HDGFP51858 240 aaKnown RBP16.92■□□□□ 0.3
RERE-204ENST00000400908 ERCC4Q92889 916 aaPredicted RBP16.92■□□□□ 0.3
RERE-204ENST00000400908 CT47A1Q5JQC4 288 aaPredicted RBP16.92■□□□□ 0.3
RERE-204ENST00000400908 ZNF644Q9H582 1327 aaPredicted RBP16.92■□□□□ 0.3
RERE-204ENST00000400908 NAP1L1P55209 391 aaKnown RBP16.92■□□□□ 0.3
RERE-204ENST00000400908 MTERF4Q7Z6M4 381 aaKnown RBP16.92■□□□□ 0.3
RERE-204ENST00000400908 NEXNQ0ZGT2 675 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 HOOK1Q9UJC3 728 aaKnown RBP16.91■□□□□ 0.3
RERE-204ENST00000400908 MRC2Q9UBG0 1479 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 PRKCSHP14314 528 aaPredicted RBP16.91■□□□□ 0.3
RERE-204ENST00000400908 CCDC173Q0VFZ6 552 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 ODF2Q5BJF6 829 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 FAM43AQ8N2R8 423 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 FRAT2O75474 233 aaPredicted RBP16.91■□□□□ 0.3
RERE-204ENST00000400908 NCOA2Q15596 1464 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 FYCO1Q9BQS8 1478 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 SMC4Q9NTJ3 1288 aa16.91■□□□□ 0.3
RERE-204ENST00000400908 RALBP1Q15311 655 aa16.9■□□□□ 0.3
RERE-204ENST00000400908 SYNE3Q6ZMZ3 975 aa16.9■□□□□ 0.3
RERE-204ENST00000400908 MCTP1Q6DN14 999 aa16.9■□□□□ 0.3
RERE-204ENST00000400908 TSPYL1Q9H0U9 437 aa16.89■□□□□ 0.3
RERE-204ENST00000400908 TSHZ2Q9NRE2 1034 aa16.89■□□□□ 0.3
RERE-204ENST00000400908 CCDC144AA2RUR9 1427 aa16.89■□□□□ 0.29
RERE-204ENST00000400908 U2AF1L5P0DN76 240 aaPredicted RBP16.89■□□□□ 0.29
RERE-204ENST00000400908 U2AF1Q01081 240 aaKnown RBP eCLIP16.89■□□□□ 0.29
RERE-204ENST00000400908 ZRSR2Q15696 482 aaKnown RBP16.89■□□□□ 0.29
RERE-204ENST00000400908 FOXD4L6Q3SYB3 417 aaPredicted RBP16.88■□□□□ 0.29
RERE-204ENST00000400908 CPLX2Q6PUV4 134 aaKnown RBP16.88■□□□□ 0.29
RERE-204ENST00000400908 FOXD4L3Q6VB84 417 aaPredicted RBP16.88■□□□□ 0.29
RERE-204ENST00000400908 WASHC2CQ9Y4E1 1318 aa16.88■□□□□ 0.29
RERE-204ENST00000400908 HDGFL2Q7Z4V5 671 aaPredicted RBP16.88■□□□□ 0.29
RERE-204ENST00000400908 TRIM29Q14134 588 aa16.88■□□□□ 0.29
RERE-204ENST00000400908 IFT57Q9NWB7 429 aa16.88■□□□□ 0.29
RERE-204ENST00000400908 EIF3AQ14152 1382 aaKnown RBP16.88■□□□□ 0.29
RERE-204ENST00000400908 DIAPH3Q9NSV4 1193 aa16.88■□□□□ 0.29
RERE-204ENST00000400908 DNMBPQ6XZF7 1577 aa16.87■□□□□ 0.29
RERE-204ENST00000400908 MYO6Q9UM54 1294 aa16.87■□□□□ 0.29
RERE-204ENST00000400908 CSB-PGBD3P0DP91 1061 aa16.87■□□□□ 0.29
RERE-204ENST00000400908 HSP90AB2PQ58FF8 381 aa16.86■□□□□ 0.29
RERE-204ENST00000400908 EFCAB5A4FU69 1503 aa16.86■□□□□ 0.29
RERE-204ENST00000400908 SLC4A10Q6U841 1118 aa16.86■□□□□ 0.29
RERE-204ENST00000400908 UNC13AQ9UPW8 1703 aa16.86■□□□□ 0.29
RERE-204ENST00000400908 PKNOX2Q96KN3 472 aa16.85■□□□□ 0.29
RERE-204ENST00000400908 RRBP1Q9P2E9 1410 aaKnown RBP16.85■□□□□ 0.29
RERE-204ENST00000400908 LEKR1Q6ZMV7 388 aa16.85■□□□□ 0.29
RERE-204ENST00000400908 NUTM2DQ5VT03 806 aaPredicted RBP16.85■□□□□ 0.29
RERE-204ENST00000400908 IFT140Q96RY7 1462 aa16.84■□□□□ 0.29
RERE-204ENST00000400908 CAGE1Q8TC20 777 aa16.84■□□□□ 0.29
RERE-204ENST00000400908 ST20-MTHFSA0A0A6YYL1 179 aa16.84■□□□□ 0.29
RERE-204ENST00000400908 BICD2Q8TD16 824 aa16.83■□□□□ 0.29
RERE-204ENST00000400908 UACAQ9BZF9 1416 aa16.83■□□□□ 0.29
RERE-204ENST00000400908 SASS6Q6UVJ0 657 aa16.82■□□□□ 0.28
RERE-204ENST00000400908 GOLGA6L7A0A1B0GV03 622 aa16.81■□□□□ 0.28
RERE-204ENST00000400908 OSCARQ8IYS5 282 aa16.81■□□□□ 0.28
RERE-204ENST00000400908 CTDP1Q9Y5B0 961 aaPredicted RBP16.81■□□□□ 0.28
RERE-204ENST00000400908 RILPL2Q969X0 211 aa16.81■□□□□ 0.28
RERE-204ENST00000400908 ZFYVE27Q5T4F4 411 aa16.8■□□□□ 0.28
RERE-204ENST00000400908 CLUAP1Q96AJ1 413 aa16.8■□□□□ 0.28
RERE-204ENST00000400908 PODXL2Q9NZ53 605 aa16.8■□□□□ 0.28
RERE-204ENST00000400908 PEG3Q9GZU2 1588 aa16.8■□□□□ 0.28
RERE-204ENST00000400908 INCENPQ9NQS7 918 aa16.8■□□□□ 0.28
RERE-204ENST00000400908 CCDC43Q96MW1 224 aaKnown RBP16.79■□□□□ 0.28
RERE-204ENST00000400908 CENPJQ9HC77 1338 aaPredicted RBP16.79■□□□□ 0.28
RERE-204ENST00000400908 AMOTL1Q8IY63 956 aa16.79■□□□□ 0.28
RERE-204ENST00000400908 R3HCC1Q9Y3T6 440 aaKnown RBP16.79■□□□□ 0.28
RERE-204ENST00000400908 OFD1O75665 1012 aa16.79■□□□□ 0.28
RERE-204ENST00000400908 DYDC1Q8WWB3 177 aa16.79■□□□□ 0.28
RERE-204ENST00000400908 USP47Q96K76 1375 aa16.78■□□□□ 0.28
RERE-204ENST00000400908 KIF15Q9NS87 1388 aa16.78■□□□□ 0.28
RERE-204ENST00000400908 LRRFIP1Q32MZ4 808 aaKnown RBP16.78■□□□□ 0.28
RERE-204ENST00000400908 FAM161AQ3B820 660 aa16.78■□□□□ 0.28
RERE-204ENST00000400908 GTF2E1P29083 439 aaPredicted RBP16.77■□□□□ 0.28
RERE-204ENST00000400908 CPLX1O14810 134 aa16.77■□□□□ 0.28
RERE-204ENST00000400908 KIAA0754O94854 1291 aa16.77■□□□□ 0.28
RERE-204ENST00000400908 AXDND1Q5T1B0 1012 aaPredicted RBP16.77■□□□□ 0.28
RERE-204ENST00000400908 TIAM1Q13009 1591 aa16.77■□□□□ 0.28
RERE-204ENST00000400908 SNAPC4Q5SXM2 1469 aa16.77■□□□□ 0.27
RERE-204ENST00000400908 PAK3O75914 559 aaPredicted RBP16.76■□□□□ 0.27
RERE-204ENST00000400908 SKIDA1Q1XH10 827 aa16.76■□□□□ 0.27
RERE-204ENST00000400908 CCDC39Q9UFE4 941 aa16.76■□□□□ 0.27
RERE-204ENST00000400908 NLRP13Q86W25 1043 aa16.76■□□□□ 0.27
RERE-204ENST00000400908 NEFHP12036 1026 aa16.76■□□□□ 0.27
RERE-204ENST00000400908 SLC4A3P48751 1232 aa16.76■□□□□ 0.27
RERE-204ENST00000400908 CYB5RLQ6IPT4 315 aa16.76■□□□□ 0.27
RERE-204ENST00000400908 TRIM34Q9BYJ4 488 aa16.75■□□□□ 0.27
RERE-204ENST00000400908 TRAK1Q9UPV9 953 aa16.75■□□□□ 0.27
RERE-204ENST00000400908 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP16.75■□□□□ 0.27
RERE-204ENST00000400908 ZKSCAN1P17029 563 aaPredicted RBP16.75■□□□□ 0.27
RERE-204ENST00000400908 EHBP1L1Q8N3D4 1523 aa16.75■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 34.8 ms