RNA–Protein interactions for RNA: ENST00000400068.7

SIRPA-203, Transcript of signal regulatory protein alpha, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene SIRPA, Length 4,201 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIRPA-203ENST00000400068 SLC4A3P48751 1232 aa17.36■□□□□ 0.37
SIRPA-203ENST00000400068 TCERG1O14776 1098 aaKnown RBP17.35■□□□□ 0.37
SIRPA-203ENST00000400068 HSP90AA1P07900 732 aaKnown RBP17.35■□□□□ 0.37
SIRPA-203ENST00000400068 ADGRL1O94910 1474 aa17.34■□□□□ 0.37
SIRPA-203ENST00000400068 TEX14Q8IWB6 1497 aa17.34■□□□□ 0.37
SIRPA-203ENST00000400068 ITSN2Q9NZM3 1697 aa17.34■□□□□ 0.37
SIRPA-203ENST00000400068 SMC4Q9NTJ3 1288 aa17.33■□□□□ 0.36
SIRPA-203ENST00000400068 PDE4AP27815 886 aa17.32■□□□□ 0.36
SIRPA-203ENST00000400068 SPRYD3Q8NCJ5 442 aa17.32■□□□□ 0.36
SIRPA-203ENST00000400068 FANCAO15360 1455 aa17.32■□□□□ 0.36
SIRPA-203ENST00000400068 ITPRIPQ8IWB1 547 aa17.32■□□□□ 0.36
SIRPA-203ENST00000400068 UBE2Q2Q8WVN8 375 aa17.32■□□□□ 0.36
SIRPA-203ENST00000400068 FAM135AQ9P2D6 1515 aa17.32■□□□□ 0.36
SIRPA-203ENST00000400068 BCAR3O75815 825 aa17.31■□□□□ 0.36
SIRPA-203ENST00000400068 VSIG10Q8N0Z9 540 aa17.31■□□□□ 0.36
SIRPA-203ENST00000400068 PRAM1Q96QH2 718 aa17.31■□□□□ 0.36
SIRPA-203ENST00000400068 PANK1Q8TE04 598 aa17.31■□□□□ 0.36
SIRPA-203ENST00000400068 FBXO31Q5XUX0 539 aaPredicted RBP17.3■□□□□ 0.36
SIRPA-203ENST00000400068 PLCH2O75038 1416 aa17.3■□□□□ 0.36
SIRPA-203ENST00000400068 CD109Q6YHK3 1445 aa17.3■□□□□ 0.36
SIRPA-203ENST00000400068 APBB1O00213 710 aa17.3■□□□□ 0.36
SIRPA-203ENST00000400068 PAK3O75914 559 aaPredicted RBP17.29■□□□□ 0.36
SIRPA-203ENST00000400068 C20orf194Q5TEA3 1177 aa17.29■□□□□ 0.36
SIRPA-203ENST00000400068 TESK2Q96S53 571 aa17.29■□□□□ 0.36
SIRPA-203ENST00000400068 TCP11L2Q8N4U5 519 aa17.29■□□□□ 0.36
SIRPA-203ENST00000400068 HMOX1P09601 288 aa17.28■□□□□ 0.36
SIRPA-203ENST00000400068 SMG6Q86US8 1419 aaKnown RBP17.28■□□□□ 0.36
SIRPA-203ENST00000400068 E9PSI1 815 aa17.28■□□□□ 0.36
SIRPA-203ENST00000400068 DEKP35659 375 aaKnown RBP17.28■□□□□ 0.36
SIRPA-203ENST00000400068 DHX29Q7Z478 1369 aaKnown RBP17.28■□□□□ 0.36
SIRPA-203ENST00000400068 MYH16Q9H6N6 1097 aa17.27■□□□□ 0.36
SIRPA-203ENST00000400068 DDRGK1Q96HY6 314 aa17.27■□□□□ 0.35
SIRPA-203ENST00000400068 IPO9Q96P70 1041 aaKnown RBP17.27■□□□□ 0.35
SIRPA-203ENST00000400068 PRAG1Q86YV5 1406 aa17.27■□□□□ 0.35
SIRPA-203ENST00000400068 DENND4BO75064 1496 aaPredicted RBP17.26■□□□□ 0.35
SIRPA-203ENST00000400068 RALGAPBQ86X10 1494 aa17.26■□□□□ 0.35
SIRPA-203ENST00000400068 IDI1Q13907 227 aa17.26■□□□□ 0.35
SIRPA-203ENST00000400068 STAC3Q96MF2 364 aa17.26■□□□□ 0.35
SIRPA-203ENST00000400068 LRRIQ1Q96JM4 1722 aa17.26■□□□□ 0.35
SIRPA-203ENST00000400068 HDGFP51858 240 aaKnown RBP17.24■□□□□ 0.35
SIRPA-203ENST00000400068 LTV1Q96GA3 475 aaPredicted RBP17.24■□□□□ 0.35
SIRPA-203ENST00000400068 GCC2Q8IWJ2 1684 aa17.24■□□□□ 0.35
SIRPA-203ENST00000400068 TXNDC2Q86VQ3 553 aa17.23■□□□□ 0.35
SIRPA-203ENST00000400068 ASXL2Q76L83 1435 aa17.23■□□□□ 0.35
SIRPA-203ENST00000400068 CABP1Q9NZU7 370 aa17.23■□□□□ 0.35
SIRPA-203ENST00000400068 TSR2Q969E8 191 aaKnown RBP17.22■□□□□ 0.35
SIRPA-203ENST00000400068 RUNDC1Q96C34 613 aa17.22■□□□□ 0.35
SIRPA-203ENST00000400068 RIPK4P57078 832 aa17.22■□□□□ 0.35
SIRPA-203ENST00000400068 NOS1P29475 1434 aa17.22■□□□□ 0.35
SIRPA-203ENST00000400068 ABCC10Q5T3U5 1492 aa17.21■□□□□ 0.35
SIRPA-203ENST00000400068 WAPLQ7Z5K2 1190 aa17.21■□□□□ 0.35
SIRPA-203ENST00000400068 ADGRL2O95490 1459 aa17.21■□□□□ 0.35
SIRPA-203ENST00000400068 FBLN1P23142 703 aa17.21■□□□□ 0.35
SIRPA-203ENST00000400068 HAP1P54257 671 aaPredicted RBP17.21■□□□□ 0.35
SIRPA-203ENST00000400068 PER1O15534 1290 aaPredicted RBP17.2■□□□□ 0.34
SIRPA-203ENST00000400068 SLKQ9H2G2 1235 aaPredicted RBP17.2■□□□□ 0.34
SIRPA-203ENST00000400068 NGDNQ8NEJ9 315 aaKnown RBP17.2■□□□□ 0.34
SIRPA-203ENST00000400068 MBD5Q9P267 1494 aa17.2■□□□□ 0.34
SIRPA-203ENST00000400068 SPATA31E1Q6ZUB1 1445 aa17.2■□□□□ 0.34
SIRPA-203ENST00000400068 MSH5O43196 834 aa17.2■□□□□ 0.34
SIRPA-203ENST00000400068 DIAPH1O60610 1272 aaKnown RBP17.2■□□□□ 0.34
SIRPA-203ENST00000400068 ERCC6L2Q5T890 1561 aa17.19■□□□□ 0.34
SIRPA-203ENST00000400068 CFAP65Q6ZU64 1925 aaKnown RBP17.19■□□□□ 0.34
SIRPA-203ENST00000400068 PNNQ9H307 717 aaKnown RBP17.19■□□□□ 0.34
SIRPA-203ENST00000400068 FANCIQ9NVI1 1328 aa17.19■□□□□ 0.34
SIRPA-203ENST00000400068 NSD3Q9BZ95 1437 aa17.18■□□□□ 0.34
SIRPA-203ENST00000400068 A2MP01023 1474 aa17.18■□□□□ 0.34
SIRPA-203ENST00000400068 CENPQQ7L2Z9 268 aaPredicted RBP17.18■□□□□ 0.34
SIRPA-203ENST00000400068 PDIA4P13667 645 aaKnown RBP17.17■□□□□ 0.34
SIRPA-203ENST00000400068 NUTM2GQ5VZR2 741 aa17.17■□□□□ 0.34
SIRPA-203ENST00000400068 CDK19Q9BWU1 502 aa17.17■□□□□ 0.34
SIRPA-203ENST00000400068 BECN1Q14457 450 aa17.17■□□□□ 0.34
SIRPA-203ENST00000400068 AMER1Q5JTC6 1135 aaPredicted RBP17.17■□□□□ 0.34
SIRPA-203ENST00000400068 ABCC2Q92887 1545 aa17.17■□□□□ 0.34
SIRPA-203ENST00000400068 KDM5BQ9UGL1 1544 aa17.17■□□□□ 0.34
SIRPA-203ENST00000400068 SHANK2Q9UPX8 1470 aa17.16■□□□□ 0.34
SIRPA-203ENST00000400068 ABCA8O94911 1581 aa17.16■□□□□ 0.34
SIRPA-203ENST00000400068 DUOX2Q9NRD8 1548 aa17.16■□□□□ 0.34
SIRPA-203ENST00000400068 RWDD1Q9H446 243 aaPredicted RBP17.16■□□□□ 0.34
SIRPA-203ENST00000400068 COG3Q96JB2 828 aa17.15■□□□□ 0.34
SIRPA-203ENST00000400068 SLC26A8Q96RN1 970 aa17.14■□□□□ 0.33
SIRPA-203ENST00000400068 EID1Q9Y6B2 187 aa17.14■□□□□ 0.33
SIRPA-203ENST00000400068 MFAP1P55081 439 aaKnown RBP17.13■□□□□ 0.33
SIRPA-203ENST00000400068 WDR7Q9Y4E6 1490 aa17.13■□□□□ 0.33
SIRPA-203ENST00000400068 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP17.13■□□□□ 0.33
SIRPA-203ENST00000400068 MS4A1P11836 297 aa17.13■□□□□ 0.33
SIRPA-203ENST00000400068 AEBP2Q6ZN18 517 aaPredicted RBP17.13■□□□□ 0.33
SIRPA-203ENST00000400068 KLHL34Q8N239 644 aa17.13■□□□□ 0.33
SIRPA-203ENST00000400068 A0A0G2JS52 829 aa17.13■□□□□ 0.33
SIRPA-203ENST00000400068 IPO8O15397 1037 aaKnown RBP17.13■□□□□ 0.33
SIRPA-203ENST00000400068 CARD14Q9BXL6 1004 aa17.13■□□□□ 0.33
SIRPA-203ENST00000400068 SLC52A1Q9NWF4 448 aa17.13■□□□□ 0.33
SIRPA-203ENST00000400068 SCAF11Q99590 1463 aaKnown RBP17.13■□□□□ 0.33
SIRPA-203ENST00000400068 EXOSC9Q06265 439 aaKnown RBP17.12■□□□□ 0.33
SIRPA-203ENST00000400068 ZKSCAN2Q63HK3 967 aa17.12■□□□□ 0.33
SIRPA-203ENST00000400068 RTF1Q92541 710 aaKnown RBP17.12■□□□□ 0.33
SIRPA-203ENST00000400068 SLFN5Q08AF3 891 aa17.12■□□□□ 0.33
SIRPA-203ENST00000400068 WWC1Q8IX03 1113 aa17.12■□□□□ 0.33
SIRPA-203ENST00000400068 SLC4A10Q6U841 1118 aa17.11■□□□□ 0.33
SIRPA-203ENST00000400068 AMPHP49418 695 aa17.11■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms