RNA–Protein interactions for RNA: ENST00000399975.7

USP16-203, Transcript of ubiquitin specific peptidase 16, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene USP16, Length 2,960 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP16-203ENST00000399975 CEP170BQ9Y4F5 1589 aaPredicted RBP9.87□□□□□ -0.83
USP16-203ENST00000399975 ARHGAP23Q9P227 1491 aa9.86□□□□□ -0.83
USP16-203ENST00000399975 PRAG1Q86YV5 1406 aa9.86□□□□□ -0.83
USP16-203ENST00000399975 RALGAPBQ86X10 1494 aa9.85□□□□□ -0.83
USP16-203ENST00000399975 SETBP1Q9Y6X0 1596 aa9.84□□□□□ -0.83
USP16-203ENST00000399975 KDM4FA0A1W2PPD8 638 aa9.83□□□□□ -0.84
USP16-203ENST00000399975 PIK3C2GO75747 1445 aa9.82□□□□□ -0.84
USP16-203ENST00000399975 CEBPAP49715 358 aaPredicted RBP9.82□□□□□ -0.84
USP16-203ENST00000399975 SETD1AO15047 1707 aaKnown RBP9.82□□□□□ -0.84
USP16-203ENST00000399975 GPRASP1Q5JY77 1395 aa9.82□□□□□ -0.84
USP16-203ENST00000399975 RIMS2Q9UQ26 1411 aa9.81□□□□□ -0.84
USP16-203ENST00000399975 TMEM2Q9UHN6 1383 aa9.81□□□□□ -0.84
USP16-203ENST00000399975 ABCF1Q8NE71 845 aaKnown RBP eCLIP9.81□□□□□ -0.84
USP16-203ENST00000399975 DCAF11Q8TEB1 546 aa9.81□□□□□ -0.84
USP16-203ENST00000399975 NRXN3Q9Y4C0 1643 aa9.81□□□□□ -0.84
USP16-203ENST00000399975 NBPF8Q3BBV2 869 aa9.8□□□□□ -0.84
USP16-203ENST00000399975 IQGAP1P46940 1657 aa9.8□□□□□ -0.84
USP16-203ENST00000399975 DIP2AQ14689 1571 aa9.8□□□□□ -0.84
USP16-203ENST00000399975 VGFO15240 615 aaPredicted RBP9.8□□□□□ -0.84
USP16-203ENST00000399975 POLR1AO95602 1720 aaPredicted RBP9.79□□□□□ -0.84
USP16-203ENST00000399975 HDGFP51858 240 aaKnown RBP9.79□□□□□ -0.84
USP16-203ENST00000399975 RGL3Q3MIN7 710 aa9.79□□□□□ -0.84
USP16-203ENST00000399975 THEMISQ8N1K5 641 aaPredicted RBP9.78□□□□□ -0.84
USP16-203ENST00000399975 ADGRB1O14514 1584 aa9.78□□□□□ -0.84
USP16-203ENST00000399975 PLEKHG1Q9ULL1 1385 aa9.78□□□□□ -0.84
USP16-203ENST00000399975 MED14O60244 1454 aa9.77□□□□□ -0.84
USP16-203ENST00000399975 ALKQ9UM73 1620 aa9.77□□□□□ -0.85
USP16-203ENST00000399975 ZNF326Q5BKZ1 582 aaKnown RBP9.77□□□□□ -0.85
USP16-203ENST00000399975 ADGRF5Q8IZF2 1346 aa9.77□□□□□ -0.85
USP16-203ENST00000399975 KNDC1Q76NI1 1749 aa9.77□□□□□ -0.85
USP16-203ENST00000399975 CHGAP10645 457 aaKnown RBP9.76□□□□□ -0.85
USP16-203ENST00000399975 C14orf93Q9H972 538 aaKnown RBP9.76□□□□□ -0.85
USP16-203ENST00000399975 STAG3Q9UJ98 1225 aa9.76□□□□□ -0.85
USP16-203ENST00000399975 SCAF11Q99590 1463 aaKnown RBP9.76□□□□□ -0.85
USP16-203ENST00000399975 ASXL1Q8IXJ9 1541 aa9.75□□□□□ -0.85
USP16-203ENST00000399975 KDM2AQ9Y2K7 1162 aa9.75□□□□□ -0.85
USP16-203ENST00000399975 LMTK3Q96Q04 1460 aa9.74□□□□□ -0.85
USP16-203ENST00000399975 DLC1Q96QB1 1528 aa9.74□□□□□ -0.85
USP16-203ENST00000399975 ADAMTS13Q76LX8 1427 aa9.73□□□□□ -0.85
USP16-203ENST00000399975 ROCK2O75116 1388 aaKnown RBP9.73□□□□□ -0.85
USP16-203ENST00000399975 ARHGEF28Q8N1W1 1705 aaKnown RBP9.72□□□□□ -0.85
USP16-203ENST00000399975 EID1Q9Y6B2 187 aa9.72□□□□□ -0.85
USP16-203ENST00000399975 PELP1Q8IZL8 1130 aaKnown RBP9.72□□□□□ -0.85
USP16-203ENST00000399975 PIK3R4Q99570 1358 aa9.71□□□□□ -0.85
USP16-203ENST00000399975 LTKP29376 864 aa9.71□□□□□ -0.85
USP16-203ENST00000399975 TECPR2O15040 1411 aa9.71□□□□□ -0.86
USP16-203ENST00000399975 CPS1P31327 1500 aa9.71□□□□□ -0.86
USP16-203ENST00000399975 XRN1Q8IZH2 1706 aaKnown RBP9.71□□□□□ -0.86
USP16-203ENST00000399975 STRCQ7RTU9 1775 aa9.7□□□□□ -0.86
USP16-203ENST00000399975 TXNDC2Q86VQ3 553 aa9.7□□□□□ -0.86
USP16-203ENST00000399975 CFAP70Q5T0N1 1121 aa9.7□□□□□ -0.86
USP16-203ENST00000399975 ANKLE2Q86XL3 938 aa9.7□□□□□ -0.86
USP16-203ENST00000399975 SIRT1Q96EB6 747 aa9.7□□□□□ -0.86
USP16-203ENST00000399975 TBX22Q9Y458 520 aa9.7□□□□□ -0.86
USP16-203ENST00000399975 CHD2O14647 1828 aaKnown RBP9.7□□□□□ -0.86
USP16-203ENST00000399975 USP47Q96K76 1375 aa9.7□□□□□ -0.86
USP16-203ENST00000399975 NBPF1Q3BBV0 1214 aa9.69□□□□□ -0.86
USP16-203ENST00000399975 NWD1Q149M9 1564 aa9.69□□□□□ -0.86
USP16-203ENST00000399975 LRPPRCP42704 1394 aaKnown RBP9.69□□□□□ -0.86
USP16-203ENST00000399975 NPHP4O75161 1426 aaPredicted RBP9.69□□□□□ -0.86
USP16-203ENST00000399975 EIF4G2P78344 907 aaKnown RBP eCLIP9.69□□□□□ -0.862e-6■■■□□ 15.2
USP16-203ENST00000399975 CARD11Q9BXL7 1154 aa9.69□□□□□ -0.86
USP16-203ENST00000399975 EIF3AQ14152 1382 aaKnown RBP9.69□□□□□ -0.86
USP16-203ENST00000399975 ABCC11Q96J66 1382 aa9.68□□□□□ -0.86
USP16-203ENST00000399975 SBNO2Q9Y2G9 1366 aa9.68□□□□□ -0.86
USP16-203ENST00000399975 YTHDC2Q9H6S0 1430 aaKnown RBP9.68□□□□□ -0.86
USP16-203ENST00000399975 PLPPR3Q6T4P5 718 aa9.68□□□□□ -0.86
USP16-203ENST00000399975 QRICH2Q9H0J4 1663 aa9.68□□□□□ -0.86
USP16-203ENST00000399975 FAM135BQ49AJ0 1406 aa9.67□□□□□ -0.86
USP16-203ENST00000399975 SLC24A1O60721 1099 aa9.67□□□□□ -0.86
USP16-203ENST00000399975 ZNF316A6NFI3 1004 aaPredicted RBP9.66□□□□□ -0.86
USP16-203ENST00000399975 HSPA5P11021 654 aaKnown RBP9.66□□□□□ -0.86
USP16-203ENST00000399975 PTCH1Q13635 1447 aa9.66□□□□□ -0.86
USP16-203ENST00000399975 METP08581 1390 aa9.66□□□□□ -0.86
USP16-203ENST00000399975 NUTM2DQ5VT03 806 aaPredicted RBP9.66□□□□□ -0.86
USP16-203ENST00000399975 ADGRB2O60241 1585 aa9.65□□□□□ -0.86
USP16-203ENST00000399975 PTPRUQ92729 1446 aa9.64□□□□□ -0.87
USP16-203ENST00000399975 PUS7Q96PZ0 661 aaKnown RBP9.63□□□□□ -0.87
USP16-203ENST00000399975 TESK2Q96S53 571 aa9.63□□□□□ -0.87
USP16-203ENST00000399975 NCKAP5LQ9HCH0 1330 aa9.62□□□□□ -0.87
USP16-203ENST00000399975 NKTRP30414 1462 aaKnown RBP9.62□□□□□ -0.87
USP16-203ENST00000399975 TMEM132EQ6IEE7 984 aa9.62□□□□□ -0.87
USP16-203ENST00000399975 CENPJQ9HC77 1338 aaPredicted RBP9.61□□□□□ -0.87
USP16-203ENST00000399975 ST20-MTHFSA0A0A6YYL1 179 aa9.61□□□□□ -0.87
USP16-203ENST00000399975 STRCP1A6NGW2 1772 aa9.6□□□□□ -0.87
USP16-203ENST00000399975 NCOA3Q9Y6Q9 1424 aa9.6□□□□□ -0.87
USP16-203ENST00000399975 SIPA1L2Q9P2F8 1722 aaPredicted RBP9.6□□□□□ -0.87
USP16-203ENST00000399975 CCDC7Q96M83 1385 aa9.6□□□□□ -0.87
USP16-203ENST00000399975 TULP4Q9NRJ4 1543 aa9.6□□□□□ -0.87
USP16-203ENST00000399975 KCNA6P17658 529 aa9.59□□□□□ -0.87
USP16-203ENST00000399975 MYOM1P52179 1685 aa9.59□□□□□ -0.87
USP16-203ENST00000399975 ROBO2Q9HCK4 1378 aa9.59□□□□□ -0.87
USP16-203ENST00000399975 SLC26A8Q96RN1 970 aa9.58□□□□□ -0.88
USP16-203ENST00000399975 TRAK1Q9UPV9 953 aa9.58□□□□□ -0.88
USP16-203ENST00000399975 DMRT2Q9Y5R5 561 aa9.58□□□□□ -0.88
USP16-203ENST00000399975 TMF1P82094 1093 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 CDCA8Q53HL2 280 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 BCANQ96GW7 911 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 AMOTL2Q9Y2J4 779 aa9.57□□□□□ -0.88
USP16-203ENST00000399975 CDC42BPGQ6DT37 1551 aa9.57□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 66 ms