RNA–Protein interactions for RNA: ENST00000399804.5

SCAF4-202, Transcript of SR-related CTD associated factor 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCAF4, Length 4,127 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF4-202ENST00000399804 ADGRL2O95490 1459 aa18.13■□□□□ 0.49
SCAF4-202ENST00000399804 MYH16Q9H6N6 1097 aa18.12■□□□□ 0.49
SCAF4-202ENST00000399804 ABCC10Q5T3U5 1492 aa18.11■□□□□ 0.49
SCAF4-202ENST00000399804 KDM5BQ9UGL1 1544 aa18.11■□□□□ 0.49
SCAF4-202ENST00000399804 PLIN1O60240 522 aa18.11■□□□□ 0.49
SCAF4-202ENST00000399804 HAP1P54257 671 aaPredicted RBP18.1■□□□□ 0.49
SCAF4-202ENST00000399804 MTHFSP49914 203 aa18.08■□□□□ 0.49
SCAF4-202ENST00000399804 TXNDC2Q86VQ3 553 aa18.08■□□□□ 0.48
SCAF4-202ENST00000399804 COG3Q96JB2 828 aa18.08■□□□□ 0.48
SCAF4-202ENST00000399804 MS4A1P11836 297 aa18.07■□□□□ 0.48
SCAF4-202ENST00000399804 CDCA7LQ96GN5 454 aa18.07■□□□□ 0.48
SCAF4-202ENST00000399804 A2MP01023 1474 aa18.06■□□□□ 0.48
SCAF4-202ENST00000399804 MBD5Q9P267 1494 aa18.06■□□□□ 0.48
SCAF4-202ENST00000399804 ZNF518AQ6AHZ1 1483 aa18.06■□□□□ 0.48
SCAF4-202ENST00000399804 RRP1P56182 461 aaKnown RBP18.05■□□□□ 0.48
SCAF4-202ENST00000399804 CLUAP1Q96AJ1 413 aa18.05■□□□□ 0.48
SCAF4-202ENST00000399804 EXOC6Q8TAG9 804 aa18.04■□□□□ 0.48
SCAF4-202ENST00000399804 RTEL1-TNFRSF6BF6WH68 1400 aa18.03■□□□□ 0.48
SCAF4-202ENST00000399804 E9PSI1 815 aa18.03■□□□□ 0.48
SCAF4-202ENST00000399804 RTF1Q92541 710 aaKnown RBP18.03■□□□□ 0.48
SCAF4-202ENST00000399804 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.03■□□□□ 0.481e-23■■■■□ 23.1
SCAF4-202ENST00000399804 NOS1P29475 1434 aa18.03■□□□□ 0.48
SCAF4-202ENST00000399804 KDM6BO15054 1643 aa18.02■□□□□ 0.48
SCAF4-202ENST00000399804 DIAPH1O60610 1272 aaKnown RBP18.02■□□□□ 0.48
SCAF4-202ENST00000399804 AMPHP49418 695 aa18.02■□□□□ 0.48
SCAF4-202ENST00000399804 PRAG1Q86YV5 1406 aa18.02■□□□□ 0.48
SCAF4-202ENST00000399804 CDK19Q9BWU1 502 aa18.02■□□□□ 0.48
SCAF4-202ENST00000399804 BCL2L13Q9BXK5 485 aa18.02■□□□□ 0.47
SCAF4-202ENST00000399804 CABP1Q9NZU7 370 aa18.02■□□□□ 0.47
SCAF4-202ENST00000399804 RALGAPBQ86X10 1494 aa18.02■□□□□ 0.47
SCAF4-202ENST00000399804 CHD1O14646 1710 aa18.01■□□□□ 0.47
SCAF4-202ENST00000399804 DISP3Q9P2K9 1392 aa18.01■□□□□ 0.47
SCAF4-202ENST00000399804 ERCC6L2Q5T890 1561 aa18.01■□□□□ 0.47
SCAF4-202ENST00000399804 SLC26A8Q96RN1 970 aa18.01■□□□□ 0.47
SCAF4-202ENST00000399804 SMC4Q9NTJ3 1288 aa18.01■□□□□ 0.47
SCAF4-202ENST00000399804 CALD1Q05682 793 aaKnown RBP18■□□□□ 0.47
SCAF4-202ENST00000399804 RUNDC1Q96C34 613 aa18■□□□□ 0.47
SCAF4-202ENST00000399804 LTV1Q96GA3 475 aaPredicted RBP18■□□□□ 0.47
SCAF4-202ENST00000399804 C14orf93Q9H972 538 aaKnown RBP18■□□□□ 0.47
SCAF4-202ENST00000399804 A0A0G2JS52 829 aa17.99■□□□□ 0.47
SCAF4-202ENST00000399804 IPO8O15397 1037 aaKnown RBP17.98■□□□□ 0.47
SCAF4-202ENST00000399804 NBR1Q14596 966 aa17.98■□□□□ 0.47
SCAF4-202ENST00000399804 TEX14Q8IWB6 1497 aa17.98■□□□□ 0.47
SCAF4-202ENST00000399804 SCAF11Q99590 1463 aaKnown RBP17.97■□□□□ 0.47
SCAF4-202ENST00000399804 HSP90AA1P07900 732 aaKnown RBP17.97■□□□□ 0.47
SCAF4-202ENST00000399804 WAPLQ7Z5K2 1190 aa17.97■□□□□ 0.47
SCAF4-202ENST00000399804 NGEFQ8N5V2 710 aa17.97■□□□□ 0.47
SCAF4-202ENST00000399804 TESK2Q96S53 571 aa17.96■□□□□ 0.47
SCAF4-202ENST00000399804 CRBNQ96SW2 442 aa17.96■□□□□ 0.47
SCAF4-202ENST00000399804 GCC2Q8IWJ2 1684 aa17.96■□□□□ 0.47
SCAF4-202ENST00000399804 TCP11L2Q8N4U5 519 aa17.96■□□□□ 0.47
SCAF4-202ENST00000399804 ELL2O00472 640 aaPredicted RBP17.96■□□□□ 0.46
SCAF4-202ENST00000399804 CEBPAP49715 358 aaPredicted RBP17.96■□□□□ 0.46
SCAF4-202ENST00000399804 UHRF1BP1LA0JNW5 1464 aa17.95■□□□□ 0.46
SCAF4-202ENST00000399804 ITPRIPQ8IWB1 547 aa17.95■□□□□ 0.46
SCAF4-202ENST00000399804 THEMISQ8N1K5 641 aaPredicted RBP17.95■□□□□ 0.46
SCAF4-202ENST00000399804 RIPK4P57078 832 aa17.94■□□□□ 0.46
SCAF4-202ENST00000399804 CHMP4BQ9H444 224 aaKnown RBP17.94■□□□□ 0.46
SCAF4-202ENST00000399804 HMOX1P09601 288 aa17.94■□□□□ 0.46
SCAF4-202ENST00000399804 ARHGEF5Q12774 1597 aa17.92■□□□□ 0.46
SCAF4-202ENST00000399804 LMOD3Q0VAK6 560 aa17.91■□□□□ 0.46
SCAF4-202ENST00000399804 PPP6R1Q9UPN7 881 aa17.91■□□□□ 0.46
SCAF4-202ENST00000399804 SAMD9LQ8IVG5 1584 aa17.91■□□□□ 0.46
SCAF4-202ENST00000399804 NSD3Q9BZ95 1437 aa17.91■□□□□ 0.46
SCAF4-202ENST00000399804 ARHGEF12Q9NZN5 1544 aa17.91■□□□□ 0.46
SCAF4-202ENST00000399804 TCERG1O14776 1098 aaKnown RBP17.9■□□□□ 0.46
SCAF4-202ENST00000399804 PMFBP1Q8TBY8 1022 aa17.9■□□□□ 0.46
SCAF4-202ENST00000399804 ATP7AQ04656 1500 aa17.9■□□□□ 0.46
SCAF4-202ENST00000399804 TTC37Q6PGP7 1564 aa17.9■□□□□ 0.46
SCAF4-202ENST00000399804 COG6Q9Y2V7 657 aa17.9■□□□□ 0.46
SCAF4-202ENST00000399804 UHRF1BP1Q6BDS2 1440 aa17.89■□□□□ 0.45
SCAF4-202ENST00000399804 ATAD2Q6PL18 1390 aa17.89■□□□□ 0.45
SCAF4-202ENST00000399804 DDRGK1Q96HY6 314 aa17.89■□□□□ 0.45
SCAF4-202ENST00000399804 POGZQ7Z3K3 1410 aa17.88■□□□□ 0.45
SCAF4-202ENST00000399804 NUTM2GQ5VZR2 741 aa17.88■□□□□ 0.45
SCAF4-202ENST00000399804 RWDD1Q9H446 243 aaPredicted RBP17.88■□□□□ 0.45
SCAF4-202ENST00000399804 CSB-PGBD3P0DP91 1061 aa17.87■□□□□ 0.45
SCAF4-202ENST00000399804 PSME1Q06323 249 aa17.86■□□□□ 0.45
SCAF4-202ENST00000399804 CCDC61Q9Y6R9 512 aa17.86■□□□□ 0.45
SCAF4-202ENST00000399804 NLRP6P59044 892 aa17.85■□□□□ 0.45
SCAF4-202ENST00000399804 ARXQ96QS3 562 aa17.85■□□□□ 0.45
SCAF4-202ENST00000399804 ADGBQ8N7X0 1667 aa17.85■□□□□ 0.45
SCAF4-202ENST00000399804 MYO5CQ9NQX4 1742 aa17.85■□□□□ 0.45
SCAF4-202ENST00000399804 NUDT16Q96DE0 195 aaKnown RBP17.84■□□□□ 0.45
SCAF4-202ENST00000399804 SMG6Q86US8 1419 aaKnown RBP17.84■□□□□ 0.45
SCAF4-202ENST00000399804 MSH5O43196 834 aa17.83■□□□□ 0.45
SCAF4-202ENST00000399804 AMER1Q5JTC6 1135 aaPredicted RBP17.83■□□□□ 0.45
SCAF4-202ENST00000399804 ZKSCAN2Q63HK3 967 aa17.83■□□□□ 0.45
SCAF4-202ENST00000399804 PRKAR2BP31323 418 aa17.83■□□□□ 0.44
SCAF4-202ENST00000399804 BECN1Q14457 450 aa17.83■□□□□ 0.44
SCAF4-202ENST00000399804 ZNF692Q9BU19 519 aaPredicted RBP17.82■□□□□ 0.44
SCAF4-202ENST00000399804 PER1O15534 1290 aaPredicted RBP17.82■□□□□ 0.44
SCAF4-202ENST00000399804 ZCCHC11Q5TAX3 1644 aaKnown RBP17.81■□□□□ 0.44
SCAF4-202ENST00000399804 APBB1O00213 710 aa17.81■□□□□ 0.44
SCAF4-202ENST00000399804 STK31Q9BXU1 1019 aa17.81■□□□□ 0.44
SCAF4-202ENST00000399804 MAST1Q9Y2H9 1570 aa17.81■□□□□ 0.44
SCAF4-202ENST00000399804 NOP58Q9Y2X3 529 aaKnown RBP17.8■□□□□ 0.44
SCAF4-202ENST00000399804 PREX2Q70Z35 1606 aa17.8■□□□□ 0.44
SCAF4-202ENST00000399804 SPATA31E1Q6ZUB1 1445 aa17.8■□□□□ 0.44
SCAF4-202ENST00000399804 ANKLE2Q86XL3 938 aa17.8■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 36.3 ms