RNA–Protein interactions for RNA: ENST00000399042.4

BRCC3-206, Transcript of BRCA1/BRCA2-containing complex subunit 3, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene BRCC3, Length 954 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCC3-206ENST00000399042 CAPN15O75808 1086 aa12.83□□□□□ -0.36
BRCC3-206ENST00000399042 KDM2AQ9Y2K7 1162 aa12.83□□□□□ -0.36
BRCC3-206ENST00000399042 PLA2R1Q13018 1463 aa12.83□□□□□ -0.36
BRCC3-206ENST00000399042 TRPM2O94759 1503 aa12.83□□□□□ -0.36
BRCC3-206ENST00000399042 ATXN8OSP0DMR3 200 aa12.82□□□□□ -0.36
BRCC3-206ENST00000399042 EID1Q9Y6B2 187 aa12.82□□□□□ -0.36
BRCC3-206ENST00000399042 NLRP1Q9C000 1473 aa12.82□□□□□ -0.36
BRCC3-206ENST00000399042 PREX1Q8TCU6 1659 aa12.82□□□□□ -0.36
BRCC3-206ENST00000399042 SPATA31D1Q6ZQQ2 1576 aa12.81□□□□□ -0.36
BRCC3-206ENST00000399042 DCAF11Q8TEB1 546 aa12.81□□□□□ -0.36
BRCC3-206ENST00000399042 ATF5Q9Y2D1 282 aaPredicted RBP12.81□□□□□ -0.36
BRCC3-206ENST00000399042 UGGT1Q9NYU2 1555 aa12.81□□□□□ -0.36
BRCC3-206ENST00000399042 SPHKAPQ2M3C7 1700 aa12.8□□□□□ -0.36
BRCC3-206ENST00000399042 NUTM2DQ5VT03 806 aaPredicted RBP12.8□□□□□ -0.36
BRCC3-206ENST00000399042 SYNMO15061 1565 aa12.79□□□□□ -0.36
BRCC3-206ENST00000399042 ZEB1P37275 1124 aaPredicted RBP12.79□□□□□ -0.36
BRCC3-206ENST00000399042 ABCF1Q8NE71 845 aaKnown RBP eCLIP12.79□□□□□ -0.36
BRCC3-206ENST00000399042 L3MBTL2Q969R5 705 aa12.79□□□□□ -0.36
BRCC3-206ENST00000399042 VGFO15240 615 aaPredicted RBP12.78□□□□□ -0.36
BRCC3-206ENST00000399042 TXNDC2Q86VQ3 553 aa12.78□□□□□ -0.36
BRCC3-206ENST00000399042 TIMELESSQ9UNS1 1208 aa12.78□□□□□ -0.36
BRCC3-206ENST00000399042 RPGRIP1LQ68CZ1 1315 aa12.78□□□□□ -0.36
BRCC3-206ENST00000399042 A2ML1A8K2U0 1454 aa12.78□□□□□ -0.36
BRCC3-206ENST00000399042 CLTCL1P53675 1640 aa12.77□□□□□ -0.36
BRCC3-206ENST00000399042 ANKLE2Q86XL3 938 aa12.77□□□□□ -0.37
BRCC3-206ENST00000399042 HSPA2P54652 639 aa12.76□□□□□ -0.37
BRCC3-206ENST00000399042 ZNF219Q9P2Y4 722 aaPredicted RBP12.76□□□□□ -0.37
BRCC3-206ENST00000399042 STAC3Q96MF2 364 aa12.74□□□□□ -0.37
BRCC3-206ENST00000399042 SETD1BQ9UPS6 1966 aaKnown RBP12.74□□□□□ -0.37
BRCC3-206ENST00000399042 PIK3C2BO00750 1634 aa12.73□□□□□ -0.37
BRCC3-206ENST00000399042 ADGRB3O60242 1522 aa12.73□□□□□ -0.37
BRCC3-206ENST00000399042 RIMS2Q9UQ26 1411 aa12.73□□□□□ -0.37
BRCC3-206ENST00000399042 TMEM2Q9UHN6 1383 aa12.73□□□□□ -0.37
BRCC3-206ENST00000399042 MYO3AQ8NEV4 1616 aa12.73□□□□□ -0.37
BRCC3-206ENST00000399042 CEP170BQ9Y4F5 1589 aaPredicted RBP12.73□□□□□ -0.37
BRCC3-206ENST00000399042 SPATA31E1Q6ZUB1 1445 aa12.72□□□□□ -0.37
BRCC3-206ENST00000399042 KIF1BO60333 1816 aa12.72□□□□□ -0.37
BRCC3-206ENST00000399042 NCKAP5LQ9HCH0 1330 aa12.71□□□□□ -0.37
BRCC3-206ENST00000399042 LTKP29376 864 aa12.7□□□□□ -0.38
BRCC3-206ENST00000399042 ADGRF5Q8IZF2 1346 aa12.69□□□□□ -0.38
BRCC3-206ENST00000399042 DSG3P32926 999 aa12.69□□□□□ -0.38
BRCC3-206ENST00000399042 TMEM131LA2VDJ0 1609 aa12.69□□□□□ -0.38
BRCC3-206ENST00000399042 SLC26A8Q96RN1 970 aa12.67□□□□□ -0.38
BRCC3-206ENST00000399042 SCAF11Q99590 1463 aaKnown RBP12.66□□□□□ -0.38
BRCC3-206ENST00000399042 LMTK3Q96Q04 1460 aa12.65□□□□□ -0.38
BRCC3-206ENST00000399042 UBR1Q8IWV7 1749 aa12.65□□□□□ -0.38
BRCC3-206ENST00000399042 CFAP70Q5T0N1 1121 aa12.65□□□□□ -0.38
BRCC3-206ENST00000399042 NEURL4Q96JN8 1562 aa12.64□□□□□ -0.39
BRCC3-206ENST00000399042 ZFYVE9O95405 1425 aa12.64□□□□□ -0.39
BRCC3-206ENST00000399042 NBPF8Q3BBV2 869 aa12.64□□□□□ -0.39
BRCC3-206ENST00000399042 PLEKHG1Q9ULL1 1385 aa12.64□□□□□ -0.39
BRCC3-206ENST00000399042 ZNF142P52746 1687 aaPredicted RBP12.64□□□□□ -0.39
BRCC3-206ENST00000399042 SLIT1O75093 1534 aa12.63□□□□□ -0.39
BRCC3-206ENST00000399042 CARD11Q9BXL7 1154 aa12.63□□□□□ -0.39
BRCC3-206ENST00000399042 STK26Q9P289 416 aa12.63□□□□□ -0.39
BRCC3-206ENST00000399042 ROCK2O75116 1388 aaKnown RBP12.63□□□□□ -0.39
BRCC3-206ENST00000399042 ARHGAP23Q9P227 1491 aa12.63□□□□□ -0.39
BRCC3-206ENST00000399042 KDM5AP29375 1690 aaKnown RBP12.63□□□□□ -0.39
BRCC3-206ENST00000399042 NPHP4O75161 1426 aaPredicted RBP12.62□□□□□ -0.39
BRCC3-206ENST00000399042 NEXMIFQ5QGS0 1516 aa12.62□□□□□ -0.39
BRCC3-206ENST00000399042 MYOM2P54296 1465 aa12.62□□□□□ -0.39
BRCC3-206ENST00000399042 TMEM132EQ6IEE7 984 aa12.62□□□□□ -0.39
BRCC3-206ENST00000399042 C14orf93Q9H972 538 aaKnown RBP12.62□□□□□ -0.39
BRCC3-206ENST00000399042 PRAG1Q86YV5 1406 aa12.62□□□□□ -0.39
BRCC3-206ENST00000399042 TBX22Q9Y458 520 aa12.61□□□□□ -0.39
BRCC3-206ENST00000399042 MYO5BQ9ULV0 1848 aa12.6□□□□□ -0.39
BRCC3-206ENST00000399042 NBPF1Q3BBV0 1214 aa12.6□□□□□ -0.39
BRCC3-206ENST00000399042 ABCB7O75027 752 aa12.59□□□□□ -0.39
BRCC3-206ENST00000399042 PIK3C2GO75747 1445 aa12.59□□□□□ -0.39
BRCC3-206ENST00000399042 POGKQ9P215 609 aa12.58□□□□□ -0.4
BRCC3-206ENST00000399042 TRAK1Q9UPV9 953 aa12.58□□□□□ -0.4
BRCC3-206ENST00000399042 PPLO60437 1756 aa12.57□□□□□ -0.4
BRCC3-206ENST00000399042 AMOTL2Q9Y2J4 779 aa12.57□□□□□ -0.4
BRCC3-206ENST00000399042 C14orf37Q86TY3 774 aa12.56□□□□□ -0.4
BRCC3-206ENST00000399042 NRXN1Q9ULB1 1477 aa12.55□□□□□ -0.4
BRCC3-206ENST00000399042 EIF4G2P78344 907 aaKnown RBP eCLIP12.55□□□□□ -0.4
BRCC3-206ENST00000399042 POLA2Q14181 598 aa12.55□□□□□ -0.4
BRCC3-206ENST00000399042 METP08581 1390 aa12.55□□□□□ -0.4
BRCC3-206ENST00000399042 MED14O60244 1454 aa12.54□□□□□ -0.4
BRCC3-206ENST00000399042 SAFB2Q14151 953 aaKnown RBP eCLIP12.54□□□□□ -0.45e-6■□□□□ 11
BRCC3-206ENST00000399042 ALKQ9UM73 1620 aa12.54□□□□□ -0.4
BRCC3-206ENST00000399042 EIF3AQ14152 1382 aaKnown RBP12.54□□□□□ -0.4
BRCC3-206ENST00000399042 ADAMTS13Q76LX8 1427 aa12.54□□□□□ -0.4
BRCC3-206ENST00000399042 KCNA6P17658 529 aa12.53□□□□□ -0.4
BRCC3-206ENST00000399042 PROSER2Q86WR7 435 aaPredicted RBP12.53□□□□□ -0.4
BRCC3-206ENST00000399042 RALGAPBQ86X10 1494 aa12.53□□□□□ -0.4
BRCC3-206ENST00000399042 SETBP1Q9Y6X0 1596 aa12.52□□□□□ -0.4
BRCC3-206ENST00000399042 IFT172Q9UG01 1749 aa12.52□□□□□ -0.41
BRCC3-206ENST00000399042 PIK3R4Q99570 1358 aa12.52□□□□□ -0.41
BRCC3-206ENST00000399042 YTHDC2Q9H6S0 1430 aaKnown RBP12.52□□□□□ -0.41
BRCC3-206ENST00000399042 IQGAP1P46940 1657 aa12.51□□□□□ -0.41
BRCC3-206ENST00000399042 PRAM1Q96QH2 718 aa12.51□□□□□ -0.41
BRCC3-206ENST00000399042 LRPPRCP42704 1394 aaKnown RBP12.51□□□□□ -0.41
BRCC3-206ENST00000399042 POLR1AO95602 1720 aaPredicted RBP12.51□□□□□ -0.41
BRCC3-206ENST00000399042 POLR3GLQ9BT43 218 aa12.5□□□□□ -0.41
BRCC3-206ENST00000399042 HIRIP3Q9BW71 556 aaPredicted RBP12.5□□□□□ -0.41
BRCC3-206ENST00000399042 USP47Q96K76 1375 aa12.5□□□□□ -0.41
BRCC3-206ENST00000399042 DIP2AQ14689 1571 aa12.5□□□□□ -0.41
BRCC3-206ENST00000399042 ZNF335Q9H4Z2 1342 aaPredicted RBP12.49□□□□□ -0.41
BRCC3-206ENST00000399042 CENPJQ9HC77 1338 aaPredicted RBP12.49□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms