RNA–Protein interactions for RNA: ENST00000398712.6

SHARPIN-202, Transcript of SHANK associated RH domain interactor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SHARPIN, Length 1,765 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHARPIN-202ENST00000398712 CFAP65Q6ZU64 1925 aaKnown RBP35.24■■■■□ 3.23
SHARPIN-202ENST00000398712 ARHGAP31Q2M1Z3 1444 aa35.23■■■■□ 3.23
SHARPIN-202ENST00000398712 NRXN1Q9ULB1 1477 aa35.22■■■■□ 3.23
SHARPIN-202ENST00000398712 NOS1P29475 1434 aa35.21■■■■□ 3.23
SHARPIN-202ENST00000398712 EIF3AQ14152 1382 aaKnown RBP35.21■■■■□ 3.23
SHARPIN-202ENST00000398712 SIGLEC1Q9BZZ2 1709 aa35.19■■■■□ 3.22
SHARPIN-202ENST00000398712 PPLO60437 1756 aa35.18■■■■□ 3.22
SHARPIN-202ENST00000398712 PIK3C2BO00750 1634 aa35.17■■■■□ 3.22
SHARPIN-202ENST00000398712 RALBP1Q15311 655 aa35.16■■■■□ 3.22
SHARPIN-202ENST00000398712 FAM9BQ8IZU0 186 aa35.16■■■■□ 3.22
SHARPIN-202ENST00000398712 ADGRF5Q8IZF2 1346 aa35.15■■■■□ 3.22
SHARPIN-202ENST00000398712 REREQ9P2R6 1566 aa35.15■■■■□ 3.22
SHARPIN-202ENST00000398712 RPGRIP1LQ68CZ1 1315 aa35.13■■■■□ 3.21
SHARPIN-202ENST00000398712 CHGAP10645 457 aaKnown RBP35.13■■■■□ 3.21
SHARPIN-202ENST00000398712 SYNMO15061 1565 aa35.13■■■■□ 3.21
SHARPIN-202ENST00000398712 CDCA8Q53HL2 280 aa35.11■■■■□ 3.21
SHARPIN-202ENST00000398712 CNGB1Q14028 1251 aaPredicted RBP35.1■■■■□ 3.21
SHARPIN-202ENST00000398712 SETBP1Q9Y6X0 1596 aa35.09■■■■□ 3.21
SHARPIN-202ENST00000398712 CFAP70Q5T0N1 1121 aa35.09■■■■□ 3.21
SHARPIN-202ENST00000398712 SUPT16HQ9Y5B9 1047 aaKnown RBP35.09■■■■□ 3.21
SHARPIN-202ENST00000398712 MYBBP1AQ9BQG0 1328 aaKnown RBP35.08■■■■□ 3.21
SHARPIN-202ENST00000398712 SLC24A1O60721 1099 aa35.08■■■■□ 3.21
SHARPIN-202ENST00000398712 AGLP35573 1532 aa35.05■■■■□ 3.2
SHARPIN-202ENST00000398712 PER1O15534 1290 aaPredicted RBP35.05■■■■□ 3.2
SHARPIN-202ENST00000398712 BRD4O60885 1362 aaPredicted RBP35.04■■■■□ 3.2
SHARPIN-202ENST00000398712 PIK3C2GO75747 1445 aa35.04■■■■□ 3.2
SHARPIN-202ENST00000398712 PREX1Q8TCU6 1659 aa35.03■■■■□ 3.2
SHARPIN-202ENST00000398712 PARD3Q8TEW0 1356 aa35.02■■■■□ 3.2
SHARPIN-202ENST00000398712 MYO3AQ8NEV4 1616 aa35.01■■■■□ 3.2
SHARPIN-202ENST00000398712 TMC1Q8TDI8 760 aa35.01■■■■□ 3.2
SHARPIN-202ENST00000398712 PANK3Q9H999 370 aa35■■■■□ 3.19
SHARPIN-202ENST00000398712 ZBED9Q6R2W3 1325 aa35■■■■□ 3.19
SHARPIN-202ENST00000398712 SLC52A1Q9NWF4 448 aa34.99■■■■□ 3.19
SHARPIN-202ENST00000398712 KDM5AP29375 1690 aaKnown RBP34.98■■■■□ 3.19
SHARPIN-202ENST00000398712 PPP6R1Q9UPN7 881 aa34.98■■■■□ 3.19
SHARPIN-202ENST00000398712 C14orf93Q9H972 538 aaKnown RBP34.95■■■■□ 3.19
SHARPIN-202ENST00000398712 NEXMIFQ5QGS0 1516 aa34.95■■■■□ 3.19
SHARPIN-202ENST00000398712 NEFLP07196 543 aa34.95■■■■□ 3.18
SHARPIN-202ENST00000398712 PNISRQ8TF01 805 aaKnown RBP34.93■■■■□ 3.18
SHARPIN-202ENST00000398712 NLRP13Q86W25 1043 aa34.92■■■■□ 3.18
SHARPIN-202ENST00000398712 ARHGEF40Q8TER5 1519 aa34.92■■■■□ 3.18
SHARPIN-202ENST00000398712 SBNO2Q9Y2G9 1366 aa34.92■■■■□ 3.18
SHARPIN-202ENST00000398712 VGFO15240 615 aaPredicted RBP34.91■■■■□ 3.18
SHARPIN-202ENST00000398712 MYOM1P52179 1685 aa34.91■■■■□ 3.18
SHARPIN-202ENST00000398712 IDI1Q13907 227 aa34.9■■■■□ 3.18
SHARPIN-202ENST00000398712 ADGRB1O14514 1584 aa34.9■■■■□ 3.18
SHARPIN-202ENST00000398712 ERVK-7P63135 1459 aa34.87■■■■□ 3.17
SHARPIN-202ENST00000398712 ZFYVE9O95405 1425 aa34.87■■■■□ 3.17
SHARPIN-202ENST00000398712 TMEM131LA2VDJ0 1609 aa34.86■■■■□ 3.17
SHARPIN-202ENST00000398712 LRPPRCP42704 1394 aaKnown RBP34.86■■■■□ 3.17
SHARPIN-202ENST00000398712 FKBP8Q14318 412 aa34.85■■■■□ 3.17
SHARPIN-202ENST00000398712 CLTCQ00610 1675 aaKnown RBP34.84■■■■□ 3.17
SHARPIN-202ENST00000398712 MYO5BQ9ULV0 1848 aa34.84■■■■□ 3.17
SHARPIN-202ENST00000398712 CENPJQ9HC77 1338 aaPredicted RBP34.83■■■■□ 3.17
SHARPIN-202ENST00000398712 CC2D1BQ5T0F9 858 aaKnown RBP34.82■■■■□ 3.17
SHARPIN-202ENST00000398712 KNSTRNQ9Y448 316 aa34.82■■■■□ 3.17
SHARPIN-202ENST00000398712 QRICH2Q9H0J4 1663 aa34.8■■■■□ 3.16
SHARPIN-202ENST00000398712 ASXL1Q8IXJ9 1541 aa34.77■■■■□ 3.16
SHARPIN-202ENST00000398712 TRAK1Q9UPV9 953 aa34.75■■■■□ 3.15
SHARPIN-202ENST00000398712 FBXO31Q5XUX0 539 aaPredicted RBP34.74■■■■□ 3.15
SHARPIN-202ENST00000398712 NPC1L1Q9UHC9 1359 aa34.74■■■■□ 3.15
SHARPIN-202ENST00000398712 SPATA31D1Q6ZQQ2 1576 aa34.73■■■■□ 3.15
SHARPIN-202ENST00000398712 TMEM132EQ6IEE7 984 aa34.72■■■■□ 3.15
SHARPIN-202ENST00000398712 NUTM2DQ5VT03 806 aaPredicted RBP34.71■■■■□ 3.15
SHARPIN-202ENST00000398712 PELP1Q8IZL8 1130 aaKnown RBP34.71■■■■□ 3.15
SHARPIN-202ENST00000398712 ARHGEF28Q8N1W1 1705 aaKnown RBP34.71■■■■□ 3.15
SHARPIN-202ENST00000398712 AMER1Q5JTC6 1135 aaPredicted RBP34.7■■■■□ 3.15
SHARPIN-202ENST00000398712 INSRP06213 1382 aa34.67■■■■□ 3.14
SHARPIN-202ENST00000398712 SMG6Q86US8 1419 aaKnown RBP34.65■■■■□ 3.14
SHARPIN-202ENST00000398712 MLECQ14165 292 aa34.64■■■■□ 3.14
SHARPIN-202ENST00000398712 STAG3Q9UJ98 1225 aa34.63■■■■□ 3.13
SHARPIN-202ENST00000398712 ESF1Q9H501 851 aaKnown RBP34.59■■■■□ 3.13
SHARPIN-202ENST00000398712 BCANQ96GW7 911 aa34.58■■■■□ 3.13
SHARPIN-202ENST00000398712 PUS7Q96PZ0 661 aaKnown RBP34.58■■■■□ 3.13
SHARPIN-202ENST00000398712 PPP2R1AP30153 589 aa34.57■■■■□ 3.12
SHARPIN-202ENST00000398712 A2ML1A8K2U0 1454 aa34.56■■■■□ 3.12
SHARPIN-202ENST00000398712 NUDCQ9Y266 331 aa34.56■■■■□ 3.12
SHARPIN-202ENST00000398712 EVC2Q86UK5 1308 aa34.54■■■■□ 3.12
SHARPIN-202ENST00000398712 BLMP54132 1417 aaPredicted RBP34.53■■■■□ 3.12
SHARPIN-202ENST00000398712 ALKQ9UM73 1620 aa34.52■■■■□ 3.12
SHARPIN-202ENST00000398712 ZMYM3Q14202 1370 aa34.52■■■■□ 3.12
SHARPIN-202ENST00000398712 ERICH6BQ5W0A0 696 aa34.51■■■■□ 3.12
SHARPIN-202ENST00000398712 TULP4Q9NRJ4 1543 aa34.51■■■■□ 3.11
SHARPIN-202ENST00000398712 CARD14Q9BXL6 1004 aa34.49■■■■□ 3.11
SHARPIN-202ENST00000398712 YTHDC2Q9H6S0 1430 aaKnown RBP34.48■■■■□ 3.11
SHARPIN-202ENST00000398712 RIMS2Q9UQ26 1411 aa34.47■■■■□ 3.11
SHARPIN-202ENST00000398712 PTPRMP28827 1452 aa34.45■■■■□ 3.11
SHARPIN-202ENST00000398712 USP32Q8NFA0 1604 aa34.45■■■■□ 3.11
SHARPIN-202ENST00000398712 STK26Q9P289 416 aa34.44■■■■□ 3.1
SHARPIN-202ENST00000398712 NSD3Q9BZ95 1437 aa34.42■■■■□ 3.1
SHARPIN-202ENST00000398712 PDE3BQ13370 1112 aa34.41■■■■□ 3.1
SHARPIN-202ENST00000398712 SLC12A5Q9H2X9 1139 aa34.41■■■■□ 3.1
SHARPIN-202ENST00000398712 WDR43Q15061 677 aaKnown RBP eCLIP34.4■■■■□ 3.1
SHARPIN-202ENST00000398712 NINLQ9Y2I6 1382 aa34.38■■■■□ 3.09
SHARPIN-202ENST00000398712 ABCF1Q8NE71 845 aaKnown RBP eCLIP34.38■■■■□ 3.09
SHARPIN-202ENST00000398712 TNRQ92752 1358 aa34.38■■■■□ 3.09
SHARPIN-202ENST00000398712 SENP3-EIF4A1A0A087X0R7 540 aa34.37■■■■□ 3.09
SHARPIN-202ENST00000398712 IRX6P78412 446 aaPredicted RBP34.37■■■■□ 3.09
SHARPIN-202ENST00000398712 SETD1AO15047 1707 aaKnown RBP34.37■■■■□ 3.09
SHARPIN-202ENST00000398712 SENP3Q9H4L4 574 aaPredicted RBP34.36■■■■□ 3.09
Retrieved 100 of 20,778 RNA–protein pairs in 78.1 ms