RNA–Protein interactions for RNA: ENST00000397537.2

SMCO1-201, Transcript of single-pass membrane protein with coiled-coil domains 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMCO1, Length 1,812 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO1-201ENST00000397537 RIPOR2Q9Y4F9 1068 aa9.57□□□□□ -0.88
SMCO1-201ENST00000397537 PSEN1P49768 467 aa9.56□□□□□ -0.88
SMCO1-201ENST00000397537 WWC1Q8IX03 1113 aa9.56□□□□□ -0.88
SMCO1-201ENST00000397537 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP9.56□□□□□ -0.88
SMCO1-201ENST00000397537 ERCC3P19447 782 aa9.56□□□□□ -0.88
SMCO1-201ENST00000397537 BCL2L13Q9BXK5 485 aa9.56□□□□□ -0.88
SMCO1-201ENST00000397537 PLEKHD1A6NEE1 506 aa9.55□□□□□ -0.88
SMCO1-201ENST00000397537 HDGFL1Q5TGJ6 251 aa9.54□□□□□ -0.88
SMCO1-201ENST00000397537 RIMBP3CA6NJZ7 1639 aa9.54□□□□□ -0.88
SMCO1-201ENST00000397537 RIMBP3BA6NNM3 1639 aa9.54□□□□□ -0.88
SMCO1-201ENST00000397537 RIMBP3Q9UFD9 1639 aa9.54□□□□□ -0.88
SMCO1-201ENST00000397537 NAALADL2Q58DX5 795 aa9.54□□□□□ -0.88
SMCO1-201ENST00000397537 GIPC2Q8TF65 315 aa9.54□□□□□ -0.88
SMCO1-201ENST00000397537 BAZ1AQ9NRL2 1556 aaPredicted RBP9.54□□□□□ -0.88
SMCO1-201ENST00000397537 SOX12O15370 315 aa9.53□□□□□ -0.88
SMCO1-201ENST00000397537 NEFLP07196 543 aa9.52□□□□□ -0.89
SMCO1-201ENST00000397537 BEGAINQ9BUH8 593 aa9.52□□□□□ -0.89
SMCO1-201ENST00000397537 TBC1D2BQ9UPU7 963 aa9.52□□□□□ -0.89
SMCO1-201ENST00000397537 PRKAR2AP13861 404 aaKnown RBP9.52□□□□□ -0.89
SMCO1-201ENST00000397537 MYSM1Q5VVJ2 828 aa9.52□□□□□ -0.89
SMCO1-201ENST00000397537 MICAL1Q8TDZ2 1067 aa9.52□□□□□ -0.89
SMCO1-201ENST00000397537 PPP1R12CQ9BZL4 782 aa9.52□□□□□ -0.89
SMCO1-201ENST00000397537 PPME1Q9Y570 386 aa9.52□□□□□ -0.89
SMCO1-201ENST00000397537 FCHSD2O94868 740 aa9.51□□□□□ -0.89
SMCO1-201ENST00000397537 SSTR3P32745 418 aaPredicted RBP9.51□□□□□ -0.89
SMCO1-201ENST00000397537 PPP1R15BQ5SWA1 713 aa9.51□□□□□ -0.89
SMCO1-201ENST00000397537 GRXCR2A6NFK2 248 aa9.5□□□□□ -0.89
SMCO1-201ENST00000397537 SF3A1Q15459 793 aaKnown RBP9.5□□□□□ -0.89
SMCO1-201ENST00000397537 FARP1Q9Y4F1 1045 aaPredicted RBP9.5□□□□□ -0.89
SMCO1-201ENST00000397537 NCAPD3P42695 1498 aa9.5□□□□□ -0.89
SMCO1-201ENST00000397537 SUGT1Q9Y2Z0 365 aa9.49□□□□□ -0.89
SMCO1-201ENST00000397537 TMEM259Q4ZIN3 620 aa9.49□□□□□ -0.89
SMCO1-201ENST00000397537 DPH6Q7L8W6 267 aa9.49□□□□□ -0.89
SMCO1-201ENST00000397537 MS4A4AQ96JQ5 239 aa9.49□□□□□ -0.89
SMCO1-201ENST00000397537 TBC1D2Q9BYX2 928 aa9.49□□□□□ -0.89
SMCO1-201ENST00000397537 RAB11FIP3O75154 756 aa9.48□□□□□ -0.89
SMCO1-201ENST00000397537 ATG7O95352 703 aa9.48□□□□□ -0.89
SMCO1-201ENST00000397537 CLCN1P35523 988 aa9.48□□□□□ -0.89
SMCO1-201ENST00000397537 SMARCA2P51531 1590 aa9.48□□□□□ -0.89
SMCO1-201ENST00000397537 CLK2P49760 499 aaKnown RBP9.47□□□□□ -0.89
SMCO1-201ENST00000397537 GPCPD1Q9NPB8 672 aa9.47□□□□□ -0.89
SMCO1-201ENST00000397537 SLC52A1Q9NWF4 448 aa9.47□□□□□ -0.89
SMCO1-201ENST00000397537 OSBPP22059 807 aa9.47□□□□□ -0.89
SMCO1-201ENST00000397537 VAMP1P23763 118 aa9.47□□□□□ -0.89
SMCO1-201ENST00000397537 MDM2Q00987 491 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-201ENST00000397537 TSPYL2Q9H2G4 693 aaPredicted RBP9.47□□□□□ -0.89
SMCO1-201ENST00000397537 CABP2Q9NPB3 220 aa9.47□□□□□ -0.89
SMCO1-201ENST00000397537 PALM3A6NDB9 673 aaPredicted RBP9.46□□□□□ -0.9
SMCO1-201ENST00000397537 GABBR2O75899 941 aa9.46□□□□□ -0.9
SMCO1-201ENST00000397537 CDCA8Q53HL2 280 aa9.46□□□□□ -0.9
SMCO1-201ENST00000397537 EXOC8Q8IYI6 725 aa9.46□□□□□ -0.9
SMCO1-201ENST00000397537 LMOD1P29536 600 aaPredicted RBP9.45□□□□□ -0.9
SMCO1-201ENST00000397537 CCER1Q8TC90 406 aaPredicted RBP9.45□□□□□ -0.9
SMCO1-201ENST00000397537 DCAF1Q9Y4B6 1507 aa9.44□□□□□ -0.9
SMCO1-201ENST00000397537 RECKO95980 971 aa9.44□□□□□ -0.9
SMCO1-201ENST00000397537 RBM46Q8TBY0 533 aaKnown RBP9.44□□□□□ -0.9
SMCO1-201ENST00000397537 PHOX2BQ99453 314 aa9.44□□□□□ -0.9
SMCO1-201ENST00000397537 MYH16Q9H6N6 1097 aa9.44□□□□□ -0.9
SMCO1-201ENST00000397537 RBM27Q9P2N5 1060 aaKnown RBP9.44□□□□□ -0.9
SMCO1-201ENST00000397537 TPD52L2O43399 206 aaKnown RBP9.43□□□□□ -0.9
SMCO1-201ENST00000397537 FOSBP53539 338 aa9.43□□□□□ -0.9
SMCO1-201ENST00000397537 PPP2R2DQ66LE6 453 aa9.43□□□□□ -0.9
SMCO1-201ENST00000397537 PHLDB3Q6NSJ2 640 aa9.43□□□□□ -0.9
SMCO1-201ENST00000397537 CDCA7Q9BWT1 371 aaPredicted RBP9.43□□□□□ -0.9
SMCO1-201ENST00000397537 B4GALNT3Q6L9W6 998 aa9.42□□□□□ -0.9
SMCO1-201ENST00000397537 NPAS4Q8IUM7 802 aa9.42□□□□□ -0.9
SMCO1-201ENST00000397537 ARHGEF11O15085 1522 aa9.42□□□□□ -0.9
SMCO1-201ENST00000397537 KIF21AQ7Z4S6 1674 aa9.42□□□□□ -0.9
SMCO1-201ENST00000397537 SOCS7O14512 581 aa9.41□□□□□ -0.9
SMCO1-201ENST00000397537 PTGDRQ13258 359 aa9.41□□□□□ -0.9
SMCO1-201ENST00000397537 CYB5RLQ6IPT4 315 aa9.41□□□□□ -0.9
SMCO1-201ENST00000397537 GPATCH3Q96I76 525 aa9.41□□□□□ -0.9
SMCO1-201ENST00000397537 TEX2Q8IWB9 1127 aa9.4□□□□□ -0.9
SMCO1-201ENST00000397537 SBNO2Q9Y2G9 1366 aa9.4□□□□□ -0.9
SMCO1-201ENST00000397537 C19orf67A6NJJ6 358 aa9.4□□□□□ -0.91
SMCO1-201ENST00000397537 C7P10643 843 aa9.4□□□□□ -0.91
SMCO1-201ENST00000397537 PRM3Q9NNZ6 103 aa9.4□□□□□ -0.91
SMCO1-201ENST00000397537 GPHNQ9NQX3 736 aaPredicted RBP9.4□□□□□ -0.91
SMCO1-201ENST00000397537 UCN2Q96RP3 112 aa9.39□□□□□ -0.91
SMCO1-201ENST00000397537 TFIP11Q9UBB9 837 aaKnown RBP9.39□□□□□ -0.91
SMCO1-201ENST00000397537 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.39□□□□□ -0.91
SMCO1-201ENST00000397537 TAGLNQ01995 201 aaKnown RBP9.38□□□□□ -0.91
SMCO1-201ENST00000397537 ZNF579Q8NAF0 562 aaKnown RBP9.38□□□□□ -0.91
SMCO1-201ENST00000397537 FAM217BQ9NTX9 383 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-201ENST00000397537 PCDH10Q9P2E7 1040 aa9.38□□□□□ -0.91
SMCO1-201ENST00000397537 LIMD1Q9UGP4 676 aa9.38□□□□□ -0.91
SMCO1-201ENST00000397537 LAMC3Q9Y6N6 1575 aa9.38□□□□□ -0.91
SMCO1-201ENST00000397537 A0A0U1RQG5 324 aaPredicted RBP9.38□□□□□ -0.91
SMCO1-201ENST00000397537 ANKRD33BA6NCL7 494 aa9.38□□□□□ -0.91
SMCO1-201ENST00000397537 MARSP56192 900 aaKnown RBP9.38□□□□□ -0.91
SMCO1-201ENST00000397537 NOP9Q86U38 636 aaKnown RBP9.38□□□□□ -0.91
SMCO1-201ENST00000397537 ZNF326Q5BKZ1 582 aaKnown RBP9.37□□□□□ -0.91
SMCO1-201ENST00000397537 GORABQ5T7V8 394 aa9.37□□□□□ -0.91
SMCO1-201ENST00000397537 PDS5BQ9NTI5 1447 aa9.36□□□□□ -0.91
SMCO1-201ENST00000397537 SOWAHDA6NJG2 315 aa9.36□□□□□ -0.91
SMCO1-201ENST00000397537 PRIM1P49642 420 aaKnown RBP9.36□□□□□ -0.91
SMCO1-201ENST00000397537 LARGE2Q8N3Y3 721 aa9.36□□□□□ -0.91
SMCO1-201ENST00000397537 LNPKQ9C0E8 428 aa9.36□□□□□ -0.91
SMCO1-201ENST00000397537 DNAJC2Q99543 621 aaKnown RBP9.35□□□□□ -0.91
SMCO1-201ENST00000397537 KLHL42Q9P2K6 505 aa9.35□□□□□ -0.91
Retrieved 100 of 20,778 RNA–protein pairs in 30.7 ms