RNA–Protein interactions for RNA: ENST00000397370.3

RBM39-205, Transcript of RNA binding motif protein 39, humanhuman

TSL 2 BASIC

Gene RBM39, Length 612 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RBM39-205ENST00000397370 RIMS2Q9UQ26 1411 aa23.69■■□□□ 1.38
RBM39-205ENST00000397370 NPHP4O75161 1426 aaPredicted RBP23.67■■□□□ 1.38
RBM39-205ENST00000397370 IQGAP1P46940 1657 aa23.67■■□□□ 1.38
RBM39-205ENST00000397370 ZNF326Q5BKZ1 582 aaKnown RBP23.66■■□□□ 1.38
RBM39-205ENST00000397370 HDGFP51858 240 aaKnown RBP23.65■■□□□ 1.38
RBM39-205ENST00000397370 ABCF1Q8NE71 845 aaKnown RBP eCLIP23.64■■□□□ 1.37
RBM39-205ENST00000397370 DHX57Q6P158 1386 aaKnown RBP23.64■■□□□ 1.37
RBM39-205ENST00000397370 SPATA31E1Q6ZUB1 1445 aa23.62■■□□□ 1.37
RBM39-205ENST00000397370 NEXMIFQ5QGS0 1516 aa23.62■■□□□ 1.37
RBM39-205ENST00000397370 PPP1R15AO75807 674 aaPredicted RBP23.61■■□□□ 1.37
RBM39-205ENST00000397370 NUTM2DQ5VT03 806 aaPredicted RBP23.6■■□□□ 1.37
RBM39-205ENST00000397370 PPLO60437 1756 aa23.59■■□□□ 1.37
RBM39-205ENST00000397370 RPGRIP1LQ68CZ1 1315 aa23.59■■□□□ 1.37
RBM39-205ENST00000397370 PLEKHG1Q9ULL1 1385 aa23.58■■□□□ 1.37
RBM39-205ENST00000397370 RGL3Q3MIN7 710 aa23.58■■□□□ 1.37
RBM39-205ENST00000397370 IFT172Q9UG01 1749 aa23.56■■□□□ 1.36
RBM39-205ENST00000397370 BCANQ96GW7 911 aa23.54■■□□□ 1.36
RBM39-205ENST00000397370 SENP3Q9H4L4 574 aaPredicted RBP23.53■■□□□ 1.36
RBM39-205ENST00000397370 VGFO15240 615 aaPredicted RBP23.51■■□□□ 1.35
RBM39-205ENST00000397370 SLC26A8Q96RN1 970 aa23.51■■□□□ 1.35
RBM39-205ENST00000397370 ZNF335Q9H4Z2 1342 aaPredicted RBP23.5■■□□□ 1.35
RBM39-205ENST00000397370 SETBP1Q9Y6X0 1596 aa23.49■■□□□ 1.35
RBM39-205ENST00000397370 NRXN3Q9Y4C0 1643 aa23.49■■□□□ 1.35
RBM39-205ENST00000397370 ADAMTS13Q76LX8 1427 aa23.49■■□□□ 1.35
RBM39-205ENST00000397370 DIP2AQ14689 1571 aa23.47■■□□□ 1.35
RBM39-205ENST00000397370 LTBP4Q8N2S1 1624 aa23.47■■□□□ 1.35
RBM39-205ENST00000397370 SIN3AQ96ST3 1273 aa23.46■■□□□ 1.35
RBM39-205ENST00000397370 TBX22Q9Y458 520 aa23.46■■□□□ 1.35
RBM39-205ENST00000397370 STRCP1A6NGW2 1772 aa23.45■■□□□ 1.34
RBM39-205ENST00000397370 ADGRF5Q8IZF2 1346 aa23.44■■□□□ 1.34
RBM39-205ENST00000397370 MYOM2P54296 1465 aa23.43■■□□□ 1.34
RBM39-205ENST00000397370 CHD2O14647 1828 aaKnown RBP23.41■■□□□ 1.34
RBM39-205ENST00000397370 NEUROD1Q13562 356 aa23.41■■□□□ 1.34
RBM39-205ENST00000397370 SETD1AO15047 1707 aaKnown RBP23.4■■□□□ 1.34
RBM39-205ENST00000397370 DCAF11Q8TEB1 546 aa23.4■■□□□ 1.34
RBM39-205ENST00000397370 ALKQ9UM73 1620 aa23.4■■□□□ 1.34
RBM39-205ENST00000397370 CPS1P31327 1500 aa23.39■■□□□ 1.34
RBM39-205ENST00000397370 PIK3R4Q99570 1358 aa23.39■■□□□ 1.33
RBM39-205ENST00000397370 NRXN1Q9ULB1 1477 aa23.38■■□□□ 1.33
RBM39-205ENST00000397370 KCNA6P17658 529 aa23.38■■□□□ 1.33
RBM39-205ENST00000397370 PIK3C2GO75747 1445 aa23.38■■□□□ 1.33
RBM39-205ENST00000397370 NWD1Q149M9 1564 aa23.38■■□□□ 1.33
RBM39-205ENST00000397370 STAC3Q96MF2 364 aa23.37■■□□□ 1.33
RBM39-205ENST00000397370 KDM2AQ9Y2K7 1162 aa23.37■■□□□ 1.33
RBM39-205ENST00000397370 CERKQ8TCT0 537 aa23.36■■□□□ 1.33
RBM39-205ENST00000397370 METP08581 1390 aa23.35■■□□□ 1.33
RBM39-205ENST00000397370 PTPRUQ92729 1446 aa23.33■■□□□ 1.33
RBM39-205ENST00000397370 L3MBTL2Q969R5 705 aa23.32■■□□□ 1.32
RBM39-205ENST00000397370 LAMC1P11047 1609 aa23.31■■□□□ 1.32
RBM39-205ENST00000397370 LRRC7Q96NW7 1537 aa23.31■■□□□ 1.32
RBM39-205ENST00000397370 CLSPNQ9HAW4 1339 aa23.31■■□□□ 1.32
RBM39-205ENST00000397370 XRN1Q8IZH2 1706 aaKnown RBP23.3■■□□□ 1.32
RBM39-205ENST00000397370 NKTRP30414 1462 aaKnown RBP23.3■■□□□ 1.32
RBM39-205ENST00000397370 C14orf93Q9H972 538 aaKnown RBP23.3■■□□□ 1.32
RBM39-205ENST00000397370 AMOTL2Q9Y2J4 779 aa23.3■■□□□ 1.32
RBM39-205ENST00000397370 XIRP1Q702N8 1843 aaKnown RBP23.29■■□□□ 1.32
RBM39-205ENST00000397370 CFAP70Q5T0N1 1121 aa23.28■■□□□ 1.32
RBM39-205ENST00000397370 CCER1Q8TC90 406 aaPredicted RBP23.28■■□□□ 1.32
RBM39-205ENST00000397370 IQSEC2Q5JU85 1478 aa23.28■■□□□ 1.32
RBM39-205ENST00000397370 ASXL1Q8IXJ9 1541 aa23.27■■□□□ 1.32
RBM39-205ENST00000397370 PROSER2Q86WR7 435 aaPredicted RBP23.26■■□□□ 1.31
RBM39-205ENST00000397370 TONSLQ96HA7 1378 aa23.26■■□□□ 1.31
RBM39-205ENST00000397370 TMEM132EQ6IEE7 984 aa23.24■■□□□ 1.31
RBM39-205ENST00000397370 PRAG1Q86YV5 1406 aa23.24■■□□□ 1.31
RBM39-205ENST00000397370 TMEM94Q12767 1356 aa23.23■■□□□ 1.31
RBM39-205ENST00000397370 KIAA1210Q9ULL0 1709 aa23.22■■□□□ 1.31
RBM39-205ENST00000397370 RBM33Q96EV2 1170 aaKnown RBP23.21■■□□□ 1.31
RBM39-205ENST00000397370 KNDC1Q76NI1 1749 aa23.2■■□□□ 1.3
RBM39-205ENST00000397370 LRPPRCP42704 1394 aaKnown RBP23.2■■□□□ 1.3
RBM39-205ENST00000397370 ADGRB1O14514 1584 aa23.19■■□□□ 1.3
RBM39-205ENST00000397370 YTHDC2Q9H6S0 1430 aaKnown RBP23.19■■□□□ 1.3
RBM39-205ENST00000397370 PTCH1Q13635 1447 aa23.18■■□□□ 1.3
RBM39-205ENST00000397370 STK26Q9P289 416 aa23.18■■□□□ 1.3
RBM39-205ENST00000397370 TECPR2O15040 1411 aa23.17■■□□□ 1.3
RBM39-205ENST00000397370 NCOA3Q9Y6Q9 1424 aa23.17■■□□□ 1.3
RBM39-205ENST00000397370 ABCC11Q96J66 1382 aa23.17■■□□□ 1.3
RBM39-205ENST00000397370 ROBO2Q9HCK4 1378 aa23.16■■□□□ 1.3
RBM39-205ENST00000397370 TRPM1Q7Z4N2 1603 aa23.14■■□□□ 1.29
RBM39-205ENST00000397370 NBPF1Q3BBV0 1214 aa23.12■■□□□ 1.29
RBM39-205ENST00000397370 NBPF8Q3BBV2 869 aa23.12■■□□□ 1.29
RBM39-205ENST00000397370 TIMELESSQ9UNS1 1208 aa23.12■■□□□ 1.29
RBM39-205ENST00000397370 MSH6P52701 1360 aa23.12■■□□□ 1.29
RBM39-205ENST00000397370 C14orf37Q86TY3 774 aa23.11■■□□□ 1.29
RBM39-205ENST00000397370 SIPA1L2Q9P2F8 1722 aaPredicted RBP23.11■■□□□ 1.29
RBM39-205ENST00000397370 DLC1Q96QB1 1528 aa23.1■■□□□ 1.29
RBM39-205ENST00000397370 UBAP1LF5GYI3 381 aa23.1■■□□□ 1.29
RBM39-205ENST00000397370 FBXO41Q8TF61 875 aa23.1■■□□□ 1.29
RBM39-205ENST00000397370 SIRT1Q96EB6 747 aa23.1■■□□□ 1.29
RBM39-205ENST00000397370 NALCNQ8IZF0 1738 aa23.1■■□□□ 1.29
RBM39-205ENST00000397370 TOM1O60784 492 aa23.09■■□□□ 1.29
RBM39-205ENST00000397370 TRAK1Q9UPV9 953 aa23.09■■□□□ 1.29
RBM39-205ENST00000397370 FAM135BQ49AJ0 1406 aa23.08■■□□□ 1.29
RBM39-205ENST00000397370 WAPLQ7Z5K2 1190 aa23.08■■□□□ 1.29
RBM39-205ENST00000397370 C19orf44Q9H6X5 657 aa23.08■■□□□ 1.29
RBM39-205ENST00000397370 PLEKHH1Q9ULM0 1364 aa23.07■■□□□ 1.28
RBM39-205ENST00000397370 ADGRL3Q9HAR2 1447 aa23.07■■□□□ 1.28
RBM39-205ENST00000397370 ARHGEF28Q8N1W1 1705 aaKnown RBP23.06■■□□□ 1.28
RBM39-205ENST00000397370 ROCK2O75116 1388 aaKnown RBP23.04■■□□□ 1.28
RBM39-205ENST00000397370 PRAM1Q96QH2 718 aa23.04■■□□□ 1.28
RBM39-205ENST00000397370 DCCP43146 1447 aa23.03■■□□□ 1.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms