RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 PPP1R15AO75807 674 aaPredicted RBP21.73■■□□□ 1.07
SEC13-208ENST00000397109 BCANQ96GW7 911 aa21.71■■□□□ 1.07
SEC13-208ENST00000397109 PLEKHG1Q9ULL1 1385 aa21.71■■□□□ 1.07
SEC13-208ENST00000397109 UBAP1LF5GYI3 381 aa21.7■■□□□ 1.06
SEC13-208ENST00000397109 SETD5Q9C0A6 1442 aa21.69■■□□□ 1.06
SEC13-208ENST00000397109 TRPM2O94759 1503 aa21.69■■□□□ 1.06
SEC13-208ENST00000397109 SLC26A8Q96RN1 970 aa21.69■■□□□ 1.06
SEC13-208ENST00000397109 STRCP1A6NGW2 1772 aa21.66■■□□□ 1.06
SEC13-208ENST00000397109 KCNA6P17658 529 aa21.65■■□□□ 1.06
SEC13-208ENST00000397109 LRRC7Q96NW7 1537 aa21.64■■□□□ 1.06
SEC13-208ENST00000397109 TOM1O60784 492 aa21.64■■□□□ 1.06
SEC13-208ENST00000397109 ZNF326Q5BKZ1 582 aaKnown RBP21.64■■□□□ 1.06
SEC13-208ENST00000397109 MPHOSPH9Q99550 1183 aa21.64■■□□□ 1.06
SEC13-208ENST00000397109 TBX22Q9Y458 520 aa21.64■■□□□ 1.05
SEC13-208ENST00000397109 CLTCL1P53675 1640 aa21.64■■□□□ 1.05
SEC13-208ENST00000397109 NUTM2DQ5VT03 806 aaPredicted RBP21.63■■□□□ 1.05
SEC13-208ENST00000397109 KIF1BO60333 1816 aa21.61■■□□□ 1.05
SEC13-208ENST00000397109 SENP3Q9H4L4 574 aaPredicted RBP21.59■■□□□ 1.05
SEC13-208ENST00000397109 RAB3GAP2Q9H2M9 1393 aa21.59■■□□□ 1.05
SEC13-208ENST00000397109 FOXD1Q16676 465 aa21.58■■□□□ 1.04
SEC13-208ENST00000397109 DIP2AQ14689 1571 aa21.57■■□□□ 1.04
SEC13-208ENST00000397109 PROSER2Q86WR7 435 aaPredicted RBP21.57■■□□□ 1.04
SEC13-208ENST00000397109 ADAMTS13Q76LX8 1427 aa21.56■■□□□ 1.04
SEC13-208ENST00000397109 PIK3R4Q99570 1358 aa21.56■■□□□ 1.04
SEC13-208ENST00000397109 HRCP23327 699 aa21.56■■□□□ 1.04
SEC13-208ENST00000397109 NKTRP30414 1462 aaKnown RBP21.56■■□□□ 1.04
SEC13-208ENST00000397109 NWD1Q149M9 1564 aa21.55■■□□□ 1.04
SEC13-208ENST00000397109 RPGRIP1LQ68CZ1 1315 aa21.55■■□□□ 1.04
SEC13-208ENST00000397109 CHD2O14647 1828 aaKnown RBP21.54■■□□□ 1.04
SEC13-208ENST00000397109 CCDC144AA2RUR9 1427 aa21.54■■□□□ 1.04
SEC13-208ENST00000397109 SCAF1Q9H7N4 1312 aaKnown RBP21.54■■□□□ 1.04
SEC13-208ENST00000397109 VGFO15240 615 aaPredicted RBP21.53■■□□□ 1.04
SEC13-208ENST00000397109 PIP4K2BP78356 416 aa21.53■■□□□ 1.04
SEC13-208ENST00000397109 TMEM94Q12767 1356 aa21.53■■□□□ 1.04
SEC13-208ENST00000397109 NEXMIFQ5QGS0 1516 aa21.52■■□□□ 1.04
SEC13-208ENST00000397109 SETBP1Q9Y6X0 1596 aa21.51■■□□□ 1.03
SEC13-208ENST00000397109 XIRP1Q702N8 1843 aaKnown RBP21.5■■□□□ 1.03
SEC13-208ENST00000397109 ALKQ9UM73 1620 aa21.47■■□□□ 1.03
SEC13-208ENST00000397109 AMOTL2Q9Y2J4 779 aa21.46■■□□□ 1.03
SEC13-208ENST00000397109 NCOA3Q9Y6Q9 1424 aa21.46■■□□□ 1.03
SEC13-208ENST00000397109 NRXN3Q9Y4C0 1643 aa21.46■■□□□ 1.03
SEC13-208ENST00000397109 RBM33Q96EV2 1170 aaKnown RBP21.45■■□□□ 1.02
SEC13-208ENST00000397109 MSH6P52701 1360 aa21.44■■□□□ 1.02
SEC13-208ENST00000397109 RGL3Q3MIN7 710 aa21.44■■□□□ 1.02
SEC13-208ENST00000397109 SPATA31E1Q6ZUB1 1445 aa21.43■■□□□ 1.02
SEC13-208ENST00000397109 PTPRUQ92729 1446 aa21.42■■□□□ 1.02
SEC13-208ENST00000397109 PPLO60437 1756 aa21.42■■□□□ 1.02
SEC13-208ENST00000397109 HSPA1LP34931 641 aa21.41■■□□□ 1.02
SEC13-208ENST00000397109 TRIM26Q12899 539 aaPredicted RBP21.41■■□□□ 1.02
SEC13-208ENST00000397109 METP08581 1390 aa21.41■■□□□ 1.02
SEC13-208ENST00000397109 ANKRD30BQ9BXX2 1392 aa21.41■■□□□ 1.02
SEC13-208ENST00000397109 C14orf37Q86TY3 774 aa21.39■■□□□ 1.02
SEC13-208ENST00000397109 FAM135BQ49AJ0 1406 aa21.38■■□□□ 1.01
SEC13-208ENST00000397109 C19orf44Q9H6X5 657 aa21.38■■□□□ 1.01
SEC13-208ENST00000397109 XRN1Q8IZH2 1706 aaKnown RBP21.37■■□□□ 1.01
SEC13-208ENST00000397109 ADGRF5Q8IZF2 1346 aa21.35■■□□□ 1.01
SEC13-208ENST00000397109 CADPS2Q86UW7 1296 aa21.34■■□□□ 1.01
SEC13-208ENST00000397109 SLAIN2Q9P270 581 aa21.34■■□□□ 1.01
SEC13-208ENST00000397109 ATF3P18847 181 aa21.33■■□□□ 1.01
SEC13-208ENST00000397109 IFT172Q9UG01 1749 aa21.33■■□□□ 1
SEC13-208ENST00000397109 SETD1AO15047 1707 aaKnown RBP21.31■■□□□ 1
SEC13-208ENST00000397109 SIPA1L2Q9P2F8 1722 aaPredicted RBP21.29■■□□□ 1
SEC13-208ENST00000397109 DCCP43146 1447 aa21.29■■□□□ 1
SEC13-208ENST00000397109 PTCH1Q13635 1447 aa21.28■■□□□ 1
SEC13-208ENST00000397109 PRAG1Q86YV5 1406 aa21.28■■□□□ 1
SEC13-208ENST00000397109 PIK3C2GO75747 1445 aa21.28■■□□□ 1
SEC13-208ENST00000397109 ROBO1Q9Y6N7 1651 aa21.27■□□□□ 0.99
SEC13-208ENST00000397109 DISP3Q9P2K9 1392 aa21.26■□□□□ 0.99
SEC13-208ENST00000397109 STAC3Q96MF2 364 aa21.26■□□□□ 0.99
SEC13-208ENST00000397109 MYOM2P54296 1465 aa21.26■□□□□ 0.99
SEC13-208ENST00000397109 ADGRL3Q9HAR2 1447 aa21.25■□□□□ 0.99
SEC13-208ENST00000397109 ROBO2Q9HCK4 1378 aa21.24■□□□□ 0.99
SEC13-208ENST00000397109 C14orf93Q9H972 538 aaKnown RBP21.24■□□□□ 0.99
SEC13-208ENST00000397109 NRXN1Q9ULB1 1477 aa21.24■□□□□ 0.99
SEC13-208ENST00000397109 PCGF6Q9BYE7 350 aa21.23■□□□□ 0.99
SEC13-208ENST00000397109 LRPPRCP42704 1394 aaKnown RBP21.22■□□□□ 0.99
SEC13-208ENST00000397109 ABCC11Q96J66 1382 aa21.21■□□□□ 0.99
SEC13-208ENST00000397109 TMEM132EQ6IEE7 984 aa21.2■□□□□ 0.98
SEC13-208ENST00000397109 DCAF11Q8TEB1 546 aa21.2■□□□□ 0.98
SEC13-208ENST00000397109 STK26Q9P289 416 aa21.2■□□□□ 0.98
SEC13-208ENST00000397109 TECPR2O15040 1411 aa21.19■□□□□ 0.98
SEC13-208ENST00000397109 CFAP70Q5T0N1 1121 aa21.19■□□□□ 0.98
SEC13-208ENST00000397109 LAMC1P11047 1609 aa21.18■□□□□ 0.98
SEC13-208ENST00000397109 KDM2AQ9Y2K7 1162 aa21.18■□□□□ 0.98
SEC13-208ENST00000397109 DHX57Q6P158 1386 aaKnown RBP21.18■□□□□ 0.98
SEC13-208ENST00000397109 NALCNQ8IZF0 1738 aa21.17■□□□□ 0.98
SEC13-208ENST00000397109 MST1RQ04912 1400 aa21.17■□□□□ 0.98
SEC13-208ENST00000397109 YTHDC2Q9H6S0 1430 aaKnown RBP21.17■□□□□ 0.98
SEC13-208ENST00000397109 BRINP3Q76B58 766 aa21.16■□□□□ 0.98
SEC13-208ENST00000397109 ASXL1Q8IXJ9 1541 aa21.16■□□□□ 0.98
SEC13-208ENST00000397109 SIRT1Q96EB6 747 aa21.16■□□□□ 0.98
SEC13-208ENST00000397109 PHLPP1O60346 1717 aa21.15■□□□□ 0.98
SEC13-208ENST00000397109 KNDC1Q76NI1 1749 aa21.14■□□□□ 0.97
SEC13-208ENST00000397109 MED1Q15648 1581 aaPredicted RBP21.14■□□□□ 0.97
SEC13-208ENST00000397109 WAPLQ7Z5K2 1190 aa21.13■□□□□ 0.97
SEC13-208ENST00000397109 AHDC1Q5TGY3 1603 aaPredicted RBP21.12■□□□□ 0.97
SEC13-208ENST00000397109 JCADQ9P266 1359 aa21.1■□□□□ 0.97
SEC13-208ENST00000397109 C1orf167Q5SNV9 1468 aa21.1■□□□□ 0.97
SEC13-208ENST00000397109 COL16A1Q07092 1604 aaPredicted RBP21.08■□□□□ 0.97
SEC13-208ENST00000397109 PHF23Q9BUL5 403 aaPredicted RBP21.07■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 97.3 ms