RNA–Protein interactions for RNA: ENST00000396222.6

LDHA-204, Transcript of lactate dehydrogenase A, humanhuman

TSL 2 BASIC

Gene LDHA, Length 1,766 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDHA-204ENST00000396222 MYT1Q01538 1121 aa10.65□□□□□ -0.71
LDHA-204ENST00000396222 SAMD1Q6SPF0 538 aaPredicted RBP10.65□□□□□ -0.71
LDHA-204ENST00000396222 DCAF11Q8TEB1 546 aa10.65□□□□□ -0.71
LDHA-204ENST00000396222 PLA2R1Q13018 1463 aa10.64□□□□□ -0.71
LDHA-204ENST00000396222 NEURL4Q96JN8 1562 aa10.64□□□□□ -0.71
LDHA-204ENST00000396222 ARHGAP31Q2M1Z3 1444 aa10.63□□□□□ -0.71
LDHA-204ENST00000396222 CNTLNQ9NXG0 1405 aa10.63□□□□□ -0.71
LDHA-204ENST00000396222 TMEM132AQ24JP5 1023 aa10.62□□□□□ -0.71
LDHA-204ENST00000396222 ARHGEF40Q8TER5 1519 aa10.62□□□□□ -0.71
LDHA-204ENST00000396222 ESF1Q9H501 851 aaKnown RBP10.62□□□□□ -0.71
LDHA-204ENST00000396222 TSHZ2Q9NRE2 1034 aa10.62□□□□□ -0.71
LDHA-204ENST00000396222 ABCC3O15438 1527 aa10.62□□□□□ -0.71
LDHA-204ENST00000396222 ZNF326Q5BKZ1 582 aaKnown RBP10.62□□□□□ -0.71
LDHA-204ENST00000396222 RGL3Q3MIN7 710 aa10.61□□□□□ -0.71
LDHA-204ENST00000396222 MIER1Q8N108 512 aa10.61□□□□□ -0.71
LDHA-204ENST00000396222 CEP152O94986 1710 aa10.61□□□□□ -0.71
LDHA-204ENST00000396222 PROM2Q8N271 834 aa10.6□□□□□ -0.71
LDHA-204ENST00000396222 CAMSAP1Q5T5Y3 1602 aa10.6□□□□□ -0.71
LDHA-204ENST00000396222 RALGAPBQ86X10 1494 aa10.6□□□□□ -0.71
LDHA-204ENST00000396222 NPATQ14207 1427 aa10.6□□□□□ -0.71
LDHA-204ENST00000396222 SP7Q8TDD2 431 aaPredicted RBP10.6□□□□□ -0.71
LDHA-204ENST00000396222 NBPF8Q3BBV2 869 aa10.59□□□□□ -0.71
LDHA-204ENST00000396222 SPATA31E1Q6ZUB1 1445 aa10.59□□□□□ -0.71
LDHA-204ENST00000396222 CARD11Q9BXL7 1154 aa10.58□□□□□ -0.72
LDHA-204ENST00000396222 SLC52A1Q9NWF4 448 aa10.58□□□□□ -0.72
LDHA-204ENST00000396222 PRAG1Q86YV5 1406 aa10.58□□□□□ -0.72
LDHA-204ENST00000396222 CLTCL1P53675 1640 aa10.58□□□□□ -0.72
LDHA-204ENST00000396222 ROCK2O75116 1388 aaKnown RBP10.58□□□□□ -0.72
LDHA-204ENST00000396222 KIF1BO60333 1816 aa10.57□□□□□ -0.72
LDHA-204ENST00000396222 SPDYE4A6NLX3 237 aa10.57□□□□□ -0.72
LDHA-204ENST00000396222 HSPA5P11021 654 aaKnown RBP10.57□□□□□ -0.72
LDHA-204ENST00000396222 RPGRIP1LQ68CZ1 1315 aa10.57□□□□□ -0.72
LDHA-204ENST00000396222 COL17A1Q9UMD9 1497 aaPredicted RBP10.57□□□□□ -0.72
LDHA-204ENST00000396222 POLR1AO95602 1720 aaPredicted RBP10.56□□□□□ -0.72
LDHA-204ENST00000396222 NOS1P29475 1434 aa10.56□□□□□ -0.72
LDHA-204ENST00000396222 ARID4BQ4LE39 1312 aaPredicted RBP10.55□□□□□ -0.72
LDHA-204ENST00000396222 NBR1Q14596 966 aa10.55□□□□□ -0.72
LDHA-204ENST00000396222 USP47Q96K76 1375 aa10.55□□□□□ -0.72
LDHA-204ENST00000396222 CHGAP10645 457 aaKnown RBP10.54□□□□□ -0.72
LDHA-204ENST00000396222 MYOM2P54296 1465 aa10.54□□□□□ -0.72
LDHA-204ENST00000396222 LAMC1P11047 1609 aa10.53□□□□□ -0.72
LDHA-204ENST00000396222 TRPM1Q7Z4N2 1603 aa10.53□□□□□ -0.72
LDHA-204ENST00000396222 GPRASP1Q5JY77 1395 aa10.52□□□□□ -0.72
LDHA-204ENST00000396222 ADGRB3O60242 1522 aa10.52□□□□□ -0.73
LDHA-204ENST00000396222 VGFO15240 615 aaPredicted RBP10.52□□□□□ -0.73
LDHA-204ENST00000396222 HIRIP3Q9BW71 556 aaPredicted RBP10.52□□□□□ -0.73
LDHA-204ENST00000396222 EIF3AQ14152 1382 aaKnown RBP10.51□□□□□ -0.73
LDHA-204ENST00000396222 DDX10Q13206 875 aaKnown RBP10.51□□□□□ -0.73
LDHA-204ENST00000396222 MLECQ14165 292 aa10.51□□□□□ -0.73
LDHA-204ENST00000396222 SPRYD3Q8NCJ5 442 aa10.51□□□□□ -0.73
LDHA-204ENST00000396222 PIK3C2BO00750 1634 aa10.51□□□□□ -0.73
LDHA-204ENST00000396222 PREX1Q8TCU6 1659 aa10.5□□□□□ -0.73
LDHA-204ENST00000396222 STAG3Q9UJ98 1225 aa10.5□□□□□ -0.73
LDHA-204ENST00000396222 KIAA1210Q9ULL0 1709 aa10.5□□□□□ -0.73
LDHA-204ENST00000396222 ANP32CO43423 234 aa10.49□□□□□ -0.73
LDHA-204ENST00000396222 C1QBPQ07021 282 aaKnown RBP10.49□□□□□ -0.73
LDHA-204ENST00000396222 C14orf37Q86TY3 774 aa10.49□□□□□ -0.73
LDHA-204ENST00000396222 MADDQ8WXG6 1647 aa10.49□□□□□ -0.73
LDHA-204ENST00000396222 ERVK-7P63135 1459 aa10.49□□□□□ -0.73
LDHA-204ENST00000396222 CLTCQ00610 1675 aaKnown RBP10.49□□□□□ -0.73
LDHA-204ENST00000396222 UGGT1Q9NYU2 1555 aa10.49□□□□□ -0.73
LDHA-204ENST00000396222 SYNMO15061 1565 aa10.48□□□□□ -0.73
LDHA-204ENST00000396222 HDGFP51858 240 aaKnown RBP10.48□□□□□ -0.73
LDHA-204ENST00000396222 ZMYM3Q14202 1370 aa10.48□□□□□ -0.73
LDHA-204ENST00000396222 CCDC7Q96M83 1385 aa10.48□□□□□ -0.73
LDHA-204ENST00000396222 CENPBP07199 599 aaPredicted RBP10.47□□□□□ -0.73
LDHA-204ENST00000396222 IDI1Q13907 227 aa10.47□□□□□ -0.73
LDHA-204ENST00000396222 ZNF219Q9P2Y4 722 aaPredicted RBP10.47□□□□□ -0.73
LDHA-204ENST00000396222 SPATA31D1Q6ZQQ2 1576 aa10.47□□□□□ -0.73
LDHA-204ENST00000396222 CDCA8Q53HL2 280 aa10.47□□□□□ -0.73
LDHA-204ENST00000396222 MROH2AA6NES4 1674 aa10.47□□□□□ -0.73
LDHA-204ENST00000396222 WASHC2AQ641Q2 1341 aa10.46□□□□□ -0.73
LDHA-204ENST00000396222 SIGLEC1Q9BZZ2 1709 aa10.46□□□□□ -0.73
LDHA-204ENST00000396222 IFT172Q9UG01 1749 aa10.46□□□□□ -0.73
LDHA-204ENST00000396222 NRXN1Q9ULB1 1477 aa10.46□□□□□ -0.73
LDHA-204ENST00000396222 CFAP65Q6ZU64 1925 aaKnown RBP10.46□□□□□ -0.73
LDHA-204ENST00000396222 ST20-MTHFSA0A0A6YYL1 179 aa10.46□□□□□ -0.74
LDHA-204ENST00000396222 ECM2O94769 699 aaPredicted RBP10.46□□□□□ -0.74
LDHA-204ENST00000396222 ZFYVE9O95405 1425 aa10.46□□□□□ -0.74
LDHA-204ENST00000396222 SCAF11Q99590 1463 aaKnown RBP10.46□□□□□ -0.74
LDHA-204ENST00000396222 TMF1P82094 1093 aa10.45□□□□□ -0.74
LDHA-204ENST00000396222 NBPF1Q3BBV0 1214 aa10.45□□□□□ -0.74
LDHA-204ENST00000396222 PPLO60437 1756 aa10.45□□□□□ -0.74
LDHA-204ENST00000396222 ABCF1Q8NE71 845 aaKnown RBP eCLIP10.44□□□□□ -0.74
LDHA-204ENST00000396222 KIF7Q2M1P5 1343 aa10.44□□□□□ -0.74
LDHA-204ENST00000396222 SETBP1Q9Y6X0 1596 aa10.44□□□□□ -0.74
LDHA-204ENST00000396222 PIK3C2GO75747 1445 aa10.44□□□□□ -0.74
LDHA-204ENST00000396222 FBXO31Q5XUX0 539 aaPredicted RBP10.44□□□□□ -0.74
LDHA-204ENST00000396222 ADGRF5Q8IZF2 1346 aa10.43□□□□□ -0.74
LDHA-204ENST00000396222 YTHDC1Q96MU7 727 aaKnown RBP10.43□□□□□ -0.74
LDHA-204ENST00000396222 TMEM131LA2VDJ0 1609 aa10.43□□□□□ -0.74
LDHA-204ENST00000396222 TNRQ92752 1358 aa10.42□□□□□ -0.74
LDHA-204ENST00000396222 C14orf93Q9H972 538 aaKnown RBP10.42□□□□□ -0.74
LDHA-204ENST00000396222 NEXMIFQ5QGS0 1516 aa10.42□□□□□ -0.74
LDHA-204ENST00000396222 NLRP1Q9C000 1473 aa10.41□□□□□ -0.74
LDHA-204ENST00000396222 KDM5AP29375 1690 aaKnown RBP10.41□□□□□ -0.74
LDHA-204ENST00000396222 RGL2O15211 777 aa10.41□□□□□ -0.74
LDHA-204ENST00000396222 CFAP70Q5T0N1 1121 aa10.41□□□□□ -0.74
LDHA-204ENST00000396222 POLR3GLQ9BT43 218 aa10.41□□□□□ -0.74
LDHA-204ENST00000396222 IQGAP1P46940 1657 aa10.41□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms