RNA–Protein interactions for RNA: ENST00000395789.5

C6orf48-209, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 3 BASIC

Gene C6orf48, Length 952 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-209ENST00000395789 KIF1BO60333 1816 aa19.76■□□□□ 0.75
C6orf48-209ENST00000395789 TRIM26Q12899 539 aaPredicted RBP19.75■□□□□ 0.75
C6orf48-209ENST00000395789 PLEKHG1Q9ULL1 1385 aa19.72■□□□□ 0.75
C6orf48-209ENST00000395789 STRCP1A6NGW2 1772 aa19.72■□□□□ 0.75
C6orf48-209ENST00000395789 NEXMIFQ5QGS0 1516 aa19.71■□□□□ 0.75
C6orf48-209ENST00000395789 ANKRD30BQ9BXX2 1392 aa19.71■□□□□ 0.75
C6orf48-209ENST00000395789 CCDC144AA2RUR9 1427 aa19.71■□□□□ 0.75
C6orf48-209ENST00000395789 SPATA31E1Q6ZUB1 1445 aa19.71■□□□□ 0.75
C6orf48-209ENST00000395789 NUTM2DQ5VT03 806 aaPredicted RBP19.71■□□□□ 0.75
C6orf48-209ENST00000395789 CERKQ8TCT0 537 aa19.7■□□□□ 0.74
C6orf48-209ENST00000395789 ABCF1Q8NE71 845 aaKnown RBP eCLIP19.69■□□□□ 0.742e-28■■□□□ 14
C6orf48-209ENST00000395789 HDGFP51858 240 aaKnown RBP19.68■□□□□ 0.74
C6orf48-209ENST00000395789 ADAMTS13Q76LX8 1427 aa19.68■□□□□ 0.74
C6orf48-209ENST00000395789 SLC26A8Q96RN1 970 aa19.67■□□□□ 0.74
C6orf48-209ENST00000395789 NRXN3Q9Y4C0 1643 aa19.66■□□□□ 0.74
C6orf48-209ENST00000395789 ZNF326Q5BKZ1 582 aaKnown RBP19.66■□□□□ 0.74
C6orf48-209ENST00000395789 PPP1R15AO75807 674 aaPredicted RBP19.65■□□□□ 0.74
C6orf48-209ENST00000395789 PPLO60437 1756 aa19.65■□□□□ 0.74
C6orf48-209ENST00000395789 SENP3Q9H4L4 574 aaPredicted RBP19.64■□□□□ 0.73
C6orf48-209ENST00000395789 CPS1P31327 1500 aa19.64■□□□□ 0.73
C6orf48-209ENST00000395789 SETBP1Q9Y6X0 1596 aa19.64■□□□□ 0.73
C6orf48-209ENST00000395789 RPGRIP1LQ68CZ1 1315 aa19.63■□□□□ 0.73
C6orf48-209ENST00000395789 IFT172Q9UG01 1749 aa19.62■□□□□ 0.73
C6orf48-209ENST00000395789 TBX22Q9Y458 520 aa19.62■□□□□ 0.73
C6orf48-209ENST00000395789 IQSEC2Q5JU85 1478 aa19.61■□□□□ 0.73
C6orf48-209ENST00000395789 DIP2AQ14689 1571 aa19.61■□□□□ 0.73
C6orf48-209ENST00000395789 NWD1Q149M9 1564 aa19.61■□□□□ 0.73
C6orf48-209ENST00000395789 CHD2O14647 1828 aaKnown RBP19.6■□□□□ 0.73
C6orf48-209ENST00000395789 RGL3Q3MIN7 710 aa19.59■□□□□ 0.73
C6orf48-209ENST00000395789 LRRC7Q96NW7 1537 aa19.59■□□□□ 0.73
C6orf48-209ENST00000395789 KCNA6P17658 529 aa19.58■□□□□ 0.72
C6orf48-209ENST00000395789 BCANQ96GW7 911 aa19.58■□□□□ 0.72
C6orf48-209ENST00000395789 VGFO15240 615 aaPredicted RBP19.57■□□□□ 0.72
C6orf48-209ENST00000395789 SETD1AO15047 1707 aaKnown RBP19.56■□□□□ 0.72
C6orf48-209ENST00000395789 XIRP1Q702N8 1843 aaKnown RBP19.56■□□□□ 0.72
C6orf48-209ENST00000395789 FBXO41Q8TF61 875 aa19.56■□□□□ 0.72
C6orf48-209ENST00000395789 PTPRUQ92729 1446 aa19.56■□□□□ 0.72
C6orf48-209ENST00000395789 DHX57Q6P158 1386 aaKnown RBP19.56■□□□□ 0.72
C6orf48-209ENST00000395789 ADGRF5Q8IZF2 1346 aa19.55■□□□□ 0.72
C6orf48-209ENST00000395789 PIK3R4Q99570 1358 aa19.55■□□□□ 0.72
C6orf48-209ENST00000395789 ILDR1Q86SU0 546 aaPredicted RBP19.54■□□□□ 0.72
C6orf48-209ENST00000395789 METP08581 1390 aa19.54■□□□□ 0.72
C6orf48-209ENST00000395789 NKTRP30414 1462 aaKnown RBP19.53■□□□□ 0.72
C6orf48-209ENST00000395789 ALKQ9UM73 1620 aa19.52■□□□□ 0.72
C6orf48-209ENST00000395789 NRXN1Q9ULB1 1477 aa19.52■□□□□ 0.72
C6orf48-209ENST00000395789 XRN1Q8IZH2 1706 aaKnown RBP19.51■□□□□ 0.71
C6orf48-209ENST00000395789 MYOM2P54296 1465 aa19.5■□□□□ 0.71
C6orf48-209ENST00000395789 PIK3C2GO75747 1445 aa19.5■□□□□ 0.71
C6orf48-209ENST00000395789 TMEM94Q12767 1356 aa19.49■□□□□ 0.71
C6orf48-209ENST00000395789 AMOTL2Q9Y2J4 779 aa19.48■□□□□ 0.71
C6orf48-209ENST00000395789 PROSER2Q86WR7 435 aaPredicted RBP19.46■□□□□ 0.71
C6orf48-209ENST00000395789 RBM33Q96EV2 1170 aaKnown RBP19.46■□□□□ 0.71
C6orf48-209ENST00000395789 ASXL1Q8IXJ9 1541 aa19.46■□□□□ 0.71
C6orf48-209ENST00000395789 PCGF6Q9BYE7 350 aa19.45■□□□□ 0.7
C6orf48-209ENST00000395789 PRAG1Q86YV5 1406 aa19.44■□□□□ 0.7
C6orf48-209ENST00000395789 SIN3AQ96ST3 1273 aa19.44■□□□□ 0.7
C6orf48-209ENST00000395789 C14orf93Q9H972 538 aaKnown RBP19.43■□□□□ 0.7
C6orf48-209ENST00000395789 UBAP1LF5GYI3 381 aa19.42■□□□□ 0.7
C6orf48-209ENST00000395789 DCAF11Q8TEB1 546 aa19.41■□□□□ 0.7
C6orf48-209ENST00000395789 NCOA3Q9Y6Q9 1424 aa19.41■□□□□ 0.7
C6orf48-209ENST00000395789 CFAP70Q5T0N1 1121 aa19.39■□□□□ 0.69
C6orf48-209ENST00000395789 STAC3Q96MF2 364 aa19.39■□□□□ 0.69
C6orf48-209ENST00000395789 ROBO2Q9HCK4 1378 aa19.39■□□□□ 0.69
C6orf48-209ENST00000395789 LAMC1P11047 1609 aa19.38■□□□□ 0.69
C6orf48-209ENST00000395789 PTCH1Q13635 1447 aa19.38■□□□□ 0.69
C6orf48-209ENST00000395789 TMEM132EQ6IEE7 984 aa19.38■□□□□ 0.69
C6orf48-209ENST00000395789 KDM2AQ9Y2K7 1162 aa19.38■□□□□ 0.69
C6orf48-209ENST00000395789 ADGRB1O14514 1584 aa19.36■□□□□ 0.69
C6orf48-209ENST00000395789 TECPR2O15040 1411 aa19.36■□□□□ 0.69
C6orf48-209ENST00000395789 LRPPRCP42704 1394 aaKnown RBP19.36■□□□□ 0.69
C6orf48-209ENST00000395789 TOM1O60784 492 aa19.36■□□□□ 0.69
C6orf48-209ENST00000395789 L3MBTL2Q969R5 705 aa19.35■□□□□ 0.69
C6orf48-209ENST00000395789 YTHDC2Q9H6S0 1430 aaKnown RBP19.34■□□□□ 0.69
C6orf48-209ENST00000395789 KNDC1Q76NI1 1749 aa19.34■□□□□ 0.69
C6orf48-209ENST00000395789 SIPA1L2Q9P2F8 1722 aaPredicted RBP19.34■□□□□ 0.69
C6orf48-209ENST00000395789 ABCC11Q96J66 1382 aa19.34■□□□□ 0.69
C6orf48-209ENST00000395789 MSH6P52701 1360 aa19.33■□□□□ 0.69
C6orf48-209ENST00000395789 NEUROD1Q13562 356 aa19.33■□□□□ 0.68
C6orf48-209ENST00000395789 NALCNQ8IZF0 1738 aa19.32■□□□□ 0.68
C6orf48-209ENST00000395789 C19orf44Q9H6X5 657 aa19.32■□□□□ 0.68
C6orf48-209ENST00000395789 ADGRL3Q9HAR2 1447 aa19.31■□□□□ 0.68
C6orf48-209ENST00000395789 PIP4K2BP78356 416 aa19.3■□□□□ 0.68
C6orf48-209ENST00000395789 STK26Q9P289 416 aa19.3■□□□□ 0.68
C6orf48-209ENST00000395789 PLEKHH1Q9ULM0 1364 aa19.29■□□□□ 0.68
C6orf48-209ENST00000395789 KIAA1210Q9ULL0 1709 aa19.28■□□□□ 0.68
C6orf48-209ENST00000395789 DCCP43146 1447 aa19.28■□□□□ 0.68
C6orf48-209ENST00000395789 FAM135BQ49AJ0 1406 aa19.27■□□□□ 0.68
C6orf48-209ENST00000395789 WAPLQ7Z5K2 1190 aa19.27■□□□□ 0.68
C6orf48-209ENST00000395789 SIRT1Q96EB6 747 aa19.27■□□□□ 0.68
C6orf48-209ENST00000395789 C14orf37Q86TY3 774 aa19.26■□□□□ 0.67
C6orf48-209ENST00000395789 SLAIN2Q9P270 581 aa19.26■□□□□ 0.67
C6orf48-209ENST00000395789 DLC1Q96QB1 1528 aa19.25■□□□□ 0.67
C6orf48-209ENST00000395789 ROBO1Q9Y6N7 1651 aa19.24■□□□□ 0.67
C6orf48-209ENST00000395789 NBPF1Q3BBV0 1214 aa19.24■□□□□ 0.67
C6orf48-209ENST00000395789 CADPS2Q86UW7 1296 aa19.24■□□□□ 0.67
C6orf48-209ENST00000395789 MST1RQ04912 1400 aa19.24■□□□□ 0.67
C6orf48-209ENST00000395789 SCAF1Q9H7N4 1312 aaKnown RBP19.24■□□□□ 0.67
C6orf48-209ENST00000395789 ATF3P18847 181 aa19.23■□□□□ 0.67
C6orf48-209ENST00000395789 HSPA1LP34931 641 aa19.23■□□□□ 0.67
C6orf48-209ENST00000395789 NBPF8Q3BBV2 869 aa19.21■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 14.4 ms