RNA–Protein interactions for RNA: ENST00000395445.5

PCDH15-213, Transcript of protocadherin related 15, humanhuman

TSL 1 (best) BASIC

Gene PCDH15, Length 5,917 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH15-213ENST00000395445 DCAF11Q8TEB1 546 aa8.36□□□□□ -1.07
PCDH15-213ENST00000395445 GGT6Q6P531 493 aa8.35□□□□□ -1.07
PCDH15-213ENST00000395445 PPP1R1BQ9UD71 204 aaPredicted RBP8.35□□□□□ -1.07
PCDH15-213ENST00000395445 SPDYE4A6NLX3 237 aa8.35□□□□□ -1.07
PCDH15-213ENST00000395445 CPLX1O14810 134 aa8.35□□□□□ -1.07
PCDH15-213ENST00000395445 WDR70Q9NW82 654 aa8.35□□□□□ -1.07
PCDH15-213ENST00000395445 TTC5Q8N0Z6 440 aa8.35□□□□□ -1.07
PCDH15-213ENST00000395445 SEPT7Q16181 437 aaKnown RBP8.35□□□□□ -1.07
PCDH15-213ENST00000395445 FOXD4L6Q3SYB3 417 aaPredicted RBP8.35□□□□□ -1.07
PCDH15-213ENST00000395445 FOXD4L3Q6VB84 417 aaPredicted RBP8.35□□□□□ -1.07
PCDH15-213ENST00000395445 ANO2Q9NQ90 1003 aa8.34□□□□□ -1.07
PCDH15-213ENST00000395445 IBSPP21815 317 aaPredicted RBP8.34□□□□□ -1.07
PCDH15-213ENST00000395445 TRDNQ13061 729 aa8.34□□□□□ -1.07
PCDH15-213ENST00000395445 MTMR7Q9Y216 660 aa8.34□□□□□ -1.07
PCDH15-213ENST00000395445 ATP6V1DQ9Y5K8 247 aa8.34□□□□□ -1.07
PCDH15-213ENST00000395445 LMOD3Q0VAK6 560 aa8.34□□□□□ -1.07
PCDH15-213ENST00000395445 HMGN5P82970 282 aaKnown RBP8.33□□□□□ -1.08
PCDH15-213ENST00000395445 FOXD1Q16676 465 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 FOSBP53539 338 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 CCDC27Q2M243 656 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 BRMS1Q9HCU9 246 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 WASHC2AQ641Q2 1341 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 H0YHG0 523 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 KTN1Q86UP2 1357 aaKnown RBP8.33□□□□□ -1.08
PCDH15-213ENST00000395445 DIAPH3Q9NSV4 1193 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 ERCC6Q03468 1493 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 NFKBIBQ15653 356 aa8.33□□□□□ -1.08
PCDH15-213ENST00000395445 ENOX2Q16206 610 aaKnown RBP8.32□□□□□ -1.08
PCDH15-213ENST00000395445 HSP90AB4PQ58FF6 505 aa8.32□□□□□ -1.08
PCDH15-213ENST00000395445 SF3B2Q13435 895 aaKnown RBP8.31□□□□□ -1.08
PCDH15-213ENST00000395445 MNS1Q8NEH6 495 aa8.31□□□□□ -1.08
PCDH15-213ENST00000395445 BCL11BQ9C0K0 894 aaPredicted RBP8.31□□□□□ -1.08
PCDH15-213ENST00000395445 SAFBQ15424 915 aaKnown RBP eCLIP8.31□□□□□ -1.08
PCDH15-213ENST00000395445 HSP90B2PQ58FF3 399 aa8.31□□□□□ -1.08
PCDH15-213ENST00000395445 EZRP15311 586 aaKnown RBP8.31□□□□□ -1.08
PCDH15-213ENST00000395445 ARGLU1Q9NWB6 273 aaPredicted RBP8.31□□□□□ -1.08
PCDH15-213ENST00000395445 DDX11L8A8MPP1 907 aa8.31□□□□□ -1.08
PCDH15-213ENST00000395445 BICD2Q8TD16 824 aa8.31□□□□□ -1.08
PCDH15-213ENST00000395445 CDK5RAP3Q96JB5 506 aa8.31□□□□□ -1.08
PCDH15-213ENST00000395445 BAZ1BQ9UIG0 1483 aaKnown RBP8.3□□□□□ -1.08
PCDH15-213ENST00000395445 WASHC2CQ9Y4E1 1318 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 MPHOSPH10O00566 681 aaKnown RBP8.3□□□□□ -1.08
PCDH15-213ENST00000395445 TTLL5Q6EMB2 1281 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 STK11IPQ8N1F8 1099 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 PDILTQ8N807 584 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 PDCL3Q9H2J4 239 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 SIN3AQ96ST3 1273 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 KRT18P05783 430 aaKnown RBP8.3□□□□□ -1.08
PCDH15-213ENST00000395445 ERLIN2O94905 339 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 OLFM4Q6UX06 510 aa8.3□□□□□ -1.08
PCDH15-213ENST00000395445 EEA1Q15075 1411 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 HSP90AB3PQ58FF7 597 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 TMEM87AQ8NBN3 555 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 RUFY2Q8WXA3 655 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 DESP17661 470 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 MATR3P43243 847 aaKnown RBP eCLIP8.29□□□□□ -1.08
PCDH15-213ENST00000395445 SUGP2Q8IX01 1082 aaKnown RBP eCLIP8.29□□□□□ -1.08
PCDH15-213ENST00000395445 ERCC4Q92889 916 aaPredicted RBP8.29□□□□□ -1.08
PCDH15-213ENST00000395445 NUTM2FA1L443 756 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 KDM4AO75164 1064 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 CECR2Q9BXF3 1484 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 TERF2IPQ9NYB0 399 aa8.29□□□□□ -1.08
PCDH15-213ENST00000395445 EIF3AQ14152 1382 aaKnown RBP8.28□□□□□ -1.08
PCDH15-213ENST00000395445 CCNB3Q8WWL7 1395 aa8.28□□□□□ -1.08
PCDH15-213ENST00000395445 IFIT2P09913 472 aaKnown RBP8.28□□□□□ -1.08
PCDH15-213ENST00000395445 GRIPAP1Q4V328 841 aa8.28□□□□□ -1.08
PCDH15-213ENST00000395445 GBP2P32456 591 aaPredicted RBP8.28□□□□□ -1.08
PCDH15-213ENST00000395445 AAMPQ13685 434 aa8.28□□□□□ -1.08
PCDH15-213ENST00000395445 SASS6Q6UVJ0 657 aa8.28□□□□□ -1.08
PCDH15-213ENST00000395445 TSPYL1Q9H0U9 437 aa8.28□□□□□ -1.08
PCDH15-213ENST00000395445 MAGEC2Q9UBF1 373 aaPredicted RBP8.28□□□□□ -1.08
PCDH15-213ENST00000395445 C9orf78Q9NZ63 289 aaPredicted RBP8.28□□□□□ -1.08
PCDH15-213ENST00000395445 XBP1P17861 261 aa8.27□□□□□ -1.08
PCDH15-213ENST00000395445 TRIM21P19474 475 aaKnown RBP8.27□□□□□ -1.08
PCDH15-213ENST00000395445 EIF2S2P20042 333 aaKnown RBP8.27□□□□□ -1.09
PCDH15-213ENST00000395445 PDE4AP27815 886 aa8.27□□□□□ -1.09
PCDH15-213ENST00000395445 DHX37Q8IY37 1157 aaKnown RBP8.27□□□□□ -1.09
PCDH15-213ENST00000395445 BAZ1AQ9NRL2 1556 aaPredicted RBP8.27□□□□□ -1.09
PCDH15-213ENST00000395445 ZKSCAN1P17029 563 aaPredicted RBP8.27□□□□□ -1.09
PCDH15-213ENST00000395445 CLASRPQ8N2M8 674 aaKnown RBP8.27□□□□□ -1.09
PCDH15-213ENST00000395445 CLIP1P30622 1438 aa8.26□□□□□ -1.09
PCDH15-213ENST00000395445 CHMP5Q9NZZ3 219 aa8.26□□□□□ -1.09
PCDH15-213ENST00000395445 CWC15Q9P013 229 aaKnown RBP8.26□□□□□ -1.09
PCDH15-213ENST00000395445 DDX49Q9Y6V7 483 aaKnown RBP8.26□□□□□ -1.09
PCDH15-213ENST00000395445 WRNQ14191 1432 aaPredicted RBP eCLIP8.26□□□□□ -1.09
PCDH15-213ENST00000395445 TEFQ10587 303 aa8.26□□□□□ -1.09
PCDH15-213ENST00000395445 NUTM2DQ5VT03 806 aaPredicted RBP8.26□□□□□ -1.09
PCDH15-213ENST00000395445 CLUAP1Q96AJ1 413 aa8.26□□□□□ -1.09
PCDH15-213ENST00000395445 BCCIPQ9P287 314 aaKnown RBP eCLIP8.26□□□□□ -1.09
PCDH15-213ENST00000395445 DHX57Q6P158 1386 aaKnown RBP8.25□□□□□ -1.09
PCDH15-213ENST00000395445 PLCD3Q8N3E9 789 aa8.25□□□□□ -1.09
PCDH15-213ENST00000395445 RNF20Q5VTR2 975 aa8.25□□□□□ -1.09
PCDH15-213ENST00000395445 CCDC146Q8IYE0 955 aa8.25□□□□□ -1.09
PCDH15-213ENST00000395445 RCAN3Q9UKA8 241 aa8.25□□□□□ -1.09
PCDH15-213ENST00000395445 BBXQ8WY36 941 aaPredicted RBP8.25□□□□□ -1.09
PCDH15-213ENST00000395445 CCDC112Q8NEF3 446 aa8.25□□□□□ -1.09
PCDH15-213ENST00000395445 HOMER2Q9NSB8 354 aa8.25□□□□□ -1.09
PCDH15-213ENST00000395445 ROCK2O75116 1388 aaKnown RBP8.24□□□□□ -1.09
PCDH15-213ENST00000395445 GOLGA6L7A0A1B0GV03 622 aa8.24□□□□□ -1.09
PCDH15-213ENST00000395445 GOLGA6L10A6NI86 522 aa8.24□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 131 ms