RNA–Protein interactions for RNA: ENST00000394949.8

SIN3A-203, Transcript of SIN3 transcription regulator family member A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIN3A, Length 4,930 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIN3A-203ENST00000394949 LRRC9Q6ZRR7 1453 aa21.06■□□□□ 0.96
SIN3A-203ENST00000394949 TAF7LQ5H9L4 462 aa21.06■□□□□ 0.96
SIN3A-203ENST00000394949 IL27Q8NEV9 243 aa21.06■□□□□ 0.96
SIN3A-203ENST00000394949 API5Q9BZZ5 524 aaKnown RBP21.05■□□□□ 0.96
SIN3A-203ENST00000394949 CCDC39Q9UFE4 941 aa21.05■□□□□ 0.96
SIN3A-203ENST00000394949 SF3A1Q15459 793 aaKnown RBP21.05■□□□□ 0.96
SIN3A-203ENST00000394949 SMG6Q86US8 1419 aaKnown RBP21.04■□□□□ 0.96
SIN3A-203ENST00000394949 RUNDC1Q96C34 613 aa21.04■□□□□ 0.96
SIN3A-203ENST00000394949 STAC3Q96MF2 364 aa21.04■□□□□ 0.96
SIN3A-203ENST00000394949 ROCK1Q13464 1354 aa21.04■□□□□ 0.96
SIN3A-203ENST00000394949 FRAT2O75474 233 aaPredicted RBP21.03■□□□□ 0.96
SIN3A-203ENST00000394949 INTS3Q68E01 1043 aaKnown RBP21.03■□□□□ 0.96
SIN3A-203ENST00000394949 ANO8Q9HCE9 1232 aaPredicted RBP21.03■□□□□ 0.96
SIN3A-203ENST00000394949 DIAPH3Q9NSV4 1193 aa21.03■□□□□ 0.96
SIN3A-203ENST00000394949 RILPL2Q969X0 211 aa21.03■□□□□ 0.96
SIN3A-203ENST00000394949 CHMP3Q9Y3E7 222 aa21.03■□□□□ 0.96
SIN3A-203ENST00000394949 H3BQV1 296 aa21.02■□□□□ 0.96
SIN3A-203ENST00000394949 IFFO2Q5TF58 517 aa21.02■□□□□ 0.96
SIN3A-203ENST00000394949 LTV1Q96GA3 475 aaPredicted RBP21.02■□□□□ 0.96
SIN3A-203ENST00000394949 NUTM2FA1L443 756 aa21.02■□□□□ 0.95
SIN3A-203ENST00000394949 TMX4Q9H1E5 349 aaPredicted RBP21.02■□□□□ 0.95
SIN3A-203ENST00000394949 COG3Q96JB2 828 aa21.01■□□□□ 0.95
SIN3A-203ENST00000394949 TEX35Q5T0J7 233 aa21.01■□□□□ 0.95
SIN3A-203ENST00000394949 NOC3LQ8WTT2 800 aaKnown RBP21.01■□□□□ 0.95
SIN3A-203ENST00000394949 RUFY2Q8WXA3 655 aa21.01■□□□□ 0.95
SIN3A-203ENST00000394949 IGF1RP08069 1367 aa21■□□□□ 0.95
SIN3A-203ENST00000394949 CCDC9Q9Y3X0 531 aaKnown RBP21■□□□□ 0.95
SIN3A-203ENST00000394949 CCDC173Q0VFZ6 552 aa20.99■□□□□ 0.95
SIN3A-203ENST00000394949 MCTP1Q6DN14 999 aa20.99■□□□□ 0.95
SIN3A-203ENST00000394949 FAM184AQ8NB25 1140 aa20.99■□□□□ 0.95
SIN3A-203ENST00000394949 SETQ01105 290 aaPredicted RBP20.98■□□□□ 0.95
SIN3A-203ENST00000394949 R3HCC1Q9Y3T6 440 aaKnown RBP20.98■□□□□ 0.95
SIN3A-203ENST00000394949 OSCARQ8IYS5 282 aa20.98■□□□□ 0.95
SIN3A-203ENST00000394949 PDE3AQ14432 1141 aa20.97■□□□□ 0.95
SIN3A-203ENST00000394949 MBD3O95983 291 aa20.96■□□□□ 0.95
SIN3A-203ENST00000394949 ZKSCAN1P17029 563 aaPredicted RBP20.96■□□□□ 0.95
SIN3A-203ENST00000394949 GAPVD1Q14C86 1478 aa20.96■□□□□ 0.95
SIN3A-203ENST00000394949 CDC45O75419 566 aa20.95■□□□□ 0.94
SIN3A-203ENST00000394949 HMGN5P82970 282 aaKnown RBP20.95■□□□□ 0.94
SIN3A-203ENST00000394949 A0A0U1RQG5 324 aaPredicted RBP20.95■□□□□ 0.94
SIN3A-203ENST00000394949 FOXD4L6Q3SYB3 417 aaPredicted RBP20.95■□□□□ 0.94
SIN3A-203ENST00000394949 FOXD4L3Q6VB84 417 aaPredicted RBP20.95■□□□□ 0.94
SIN3A-203ENST00000394949 ZNF592Q92610 1267 aa20.95■□□□□ 0.94
SIN3A-203ENST00000394949 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
SIN3A-203ENST00000394949 PKNOX2Q96KN3 472 aa20.94■□□□□ 0.94
SIN3A-203ENST00000394949 ELL2O00472 640 aaPredicted RBP20.94■□□□□ 0.94
SIN3A-203ENST00000394949 CYB5RLQ6IPT4 315 aa20.94■□□□□ 0.94
SIN3A-203ENST00000394949 NINLQ9Y2I6 1382 aa20.94■□□□□ 0.94
SIN3A-203ENST00000394949 PANK1Q8TE04 598 aa20.93■□□□□ 0.94
SIN3A-203ENST00000394949 LNPKQ9C0E8 428 aa20.93■□□□□ 0.94
SIN3A-203ENST00000394949 ERICH3Q5RHP9 1530 aa20.92■□□□□ 0.94
SIN3A-203ENST00000394949 TPM1P09493 284 aa20.92■□□□□ 0.94
SIN3A-203ENST00000394949 ADAMTS8Q9UP79 889 aa20.92■□□□□ 0.94
SIN3A-203ENST00000394949 ARGLU1Q9NWB6 273 aaPredicted RBP20.91■□□□□ 0.94
SIN3A-203ENST00000394949 LETM1O95202 739 aaPredicted RBP20.91■□□□□ 0.94
SIN3A-203ENST00000394949 MINK1Q8N4C8 1332 aaPredicted RBP20.91■□□□□ 0.94
SIN3A-203ENST00000394949 FYCO1Q9BQS8 1478 aa20.91■□□□□ 0.94
SIN3A-203ENST00000394949 DIAPH1O60610 1272 aaKnown RBP20.91■□□□□ 0.94
SIN3A-203ENST00000394949 FGD5Q6ZNL6 1462 aa20.91■□□□□ 0.94
SIN3A-203ENST00000394949 RRP9O43818 475 aaKnown RBP20.9■□□□□ 0.94
SIN3A-203ENST00000394949 TEFQ10587 303 aa20.9■□□□□ 0.94
SIN3A-203ENST00000394949 CDCA7LQ96GN5 454 aa20.9■□□□□ 0.94
SIN3A-203ENST00000394949 CASKIN1Q8WXD9 1431 aa20.9■□□□□ 0.94
SIN3A-203ENST00000394949 RIPK4P57078 832 aa20.9■□□□□ 0.94
SIN3A-203ENST00000394949 PNISRQ8TF01 805 aaKnown RBP20.9■□□□□ 0.94
SIN3A-203ENST00000394949 GTF2E1P29083 439 aaPredicted RBP20.9■□□□□ 0.94
SIN3A-203ENST00000394949 TSR1Q2NL82 804 aaKnown RBP20.89■□□□□ 0.94
SIN3A-203ENST00000394949 C1orf141Q5JVX7 400 aa20.89■□□□□ 0.94
SIN3A-203ENST00000394949 SMC3Q9UQE7 1217 aa20.89■□□□□ 0.94
SIN3A-203ENST00000394949 CCDC70Q6NSX1 233 aa20.89■□□□□ 0.94
SIN3A-203ENST00000394949 ANO2Q9NQ90 1003 aa20.89■□□□□ 0.94
SIN3A-203ENST00000394949 SASS6Q6UVJ0 657 aa20.88■□□□□ 0.93
SIN3A-203ENST00000394949 CCAR2Q8N163 923 aaKnown RBP20.88■□□□□ 0.93
SIN3A-203ENST00000394949 MSH5O43196 834 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 BICD2Q8TD16 824 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 MCM2P49736 904 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 GNAI1P63096 354 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 RNF20Q5VTR2 975 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 IFT57Q9NWB7 429 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 CLSTN1O94985 981 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 RABEP1Q15276 862 aa20.87■□□□□ 0.93
SIN3A-203ENST00000394949 PDZRN3Q9UPQ7 1066 aa20.86■□□□□ 0.93
SIN3A-203ENST00000394949 HOMER1Q86YM7 354 aa20.86■□□□□ 0.93
SIN3A-203ENST00000394949 ABCF1Q8NE71 845 aaKnown RBP eCLIP20.86■□□□□ 0.93
SIN3A-203ENST00000394949 RASSF8Q8NHQ8 419 aa20.85■□□□□ 0.93
SIN3A-203ENST00000394949 GRPEL1Q9HAV7 217 aa20.85■□□□□ 0.93
SIN3A-203ENST00000394949 CIZ1Q9ULV3 898 aaPredicted RBP20.85■□□□□ 0.93
SIN3A-203ENST00000394949 CAVIN1Q6NZI2 390 aaKnown RBP20.85■□□□□ 0.93
SIN3A-203ENST00000394949 NCOA2Q15596 1464 aa20.85■□□□□ 0.93
SIN3A-203ENST00000394949 TPD52L1Q16890 204 aaPredicted RBP20.84■□□□□ 0.93
SIN3A-203ENST00000394949 CPLX2Q6PUV4 134 aaKnown RBP20.84■□□□□ 0.93
SIN3A-203ENST00000394949 CCDC66A2RUB6 948 aa20.84■□□□□ 0.93
SIN3A-203ENST00000394949 LRRFIP1Q32MZ4 808 aaKnown RBP20.83■□□□□ 0.93
SIN3A-203ENST00000394949 NEXNQ0ZGT2 675 aa20.82■□□□□ 0.92
SIN3A-203ENST00000394949 ARAP1Q96P48 1450 aa20.82■□□□□ 0.92
SIN3A-203ENST00000394949 TSPY26PQ9H489 355 aa20.82■□□□□ 0.92
SIN3A-203ENST00000394949 CWC22Q9HCG8 908 aaKnown RBP20.82■□□□□ 0.92
SIN3A-203ENST00000394949 VPS37CA5D8V6 355 aaPredicted RBP20.82■□□□□ 0.92
SIN3A-203ENST00000394949 ESPNB1AK53 854 aa20.82■□□□□ 0.92
SIN3A-203ENST00000394949 ANKRD50Q9ULJ7 1429 aa20.81■□□□□ 0.92
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms