RNA–Protein interactions for RNA: ENST00000394081.7

RARA-202, Transcript of retinoic acid receptor alpha, humanhuman

TSL 1 (best) BASIC

Gene RARA, Length 2,285 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RARA-202ENST00000394081 ABCC2Q92887 1545 aa29.43■■■□□ 2.3
RARA-202ENST00000394081 NINLQ9Y2I6 1382 aa29.42■■■□□ 2.3
RARA-202ENST00000394081 IQGAP3Q86VI3 1631 aa29.42■■■□□ 2.3
RARA-202ENST00000394081 SYNMO15061 1565 aa29.42■■■□□ 2.3
RARA-202ENST00000394081 NKTRP30414 1462 aaKnown RBP29.42■■■□□ 2.3
RARA-202ENST00000394081 NPC1L1Q9UHC9 1359 aa29.42■■■□□ 2.3
RARA-202ENST00000394081 NGEFQ8N5V2 710 aa29.41■■■□□ 2.3
RARA-202ENST00000394081 ATP10BO94823 1461 aa29.41■■■□□ 2.3
RARA-202ENST00000394081 MAPK8IP3Q9UPT6 1336 aa29.4■■■□□ 2.3
RARA-202ENST00000394081 MAGI2Q86UL8 1455 aa29.4■■■□□ 2.3
RARA-202ENST00000394081 BECN1Q14457 450 aa29.4■■■□□ 2.3
RARA-202ENST00000394081 RGS3P49796 1198 aa29.4■■■□□ 2.3
RARA-202ENST00000394081 KNSTRNQ9Y448 316 aa29.4■■■□□ 2.3
RARA-202ENST00000394081 ZMYM3Q14202 1370 aa29.38■■■□□ 2.29
RARA-202ENST00000394081 USP19O94966 1318 aa29.38■■■□□ 2.29
RARA-202ENST00000394081 L1TD1Q5T7N2 865 aaKnown RBP29.37■■■□□ 2.29
RARA-202ENST00000394081 SAMD9LQ8IVG5 1584 aa29.37■■■□□ 2.29
RARA-202ENST00000394081 AMER1Q5JTC6 1135 aaPredicted RBP29.36■■■□□ 2.29
RARA-202ENST00000394081 PREX2Q70Z35 1606 aa29.36■■■□□ 2.29
RARA-202ENST00000394081 ASXL1Q8IXJ9 1541 aa29.36■■■□□ 2.29
RARA-202ENST00000394081 CGNL1Q0VF96 1302 aa29.36■■■□□ 2.29
RARA-202ENST00000394081 HNRNPMP52272 730 aaKnown RBP eCLIP29.36■■■□□ 2.29
RARA-202ENST00000394081 RGL3Q3MIN7 710 aa29.36■■■□□ 2.29
RARA-202ENST00000394081 CDCA8Q53HL2 280 aa29.36■■■□□ 2.29
RARA-202ENST00000394081 IQGAP1P46940 1657 aa29.34■■■□□ 2.29
RARA-202ENST00000394081 PLXNC1O60486 1568 aa29.34■■■□□ 2.29
RARA-202ENST00000394081 EIF5BO60841 1220 aaKnown RBP29.33■■■□□ 2.29
RARA-202ENST00000394081 PDE3AQ14432 1141 aa29.33■■■□□ 2.29
RARA-202ENST00000394081 E9PSI1 815 aa29.31■■■□□ 2.28
RARA-202ENST00000394081 AAMPQ13685 434 aa29.31■■■□□ 2.28
RARA-202ENST00000394081 CDC42BPBQ9Y5S2 1711 aa29.3■■■□□ 2.28
RARA-202ENST00000394081 NLRP1Q9C000 1473 aa29.28■■■□□ 2.28
RARA-202ENST00000394081 JPH4Q96JJ6 628 aa29.25■■■□□ 2.27
RARA-202ENST00000394081 STAC3Q96MF2 364 aa29.24■■■□□ 2.27
RARA-202ENST00000394081 POGKQ9P215 609 aa29.24■■■□□ 2.27
RARA-202ENST00000394081 MADDQ8WXG6 1647 aa29.24■■■□□ 2.27
RARA-202ENST00000394081 ANTXR1Q9H6X2 564 aa29.23■■■□□ 2.27
RARA-202ENST00000394081 IGHDP01880 384 aa29.22■■■□□ 2.27
RARA-202ENST00000394081 SCAPERQ9BY12 1400 aa29.22■■■□□ 2.27
RARA-202ENST00000394081 CLUAP1Q96AJ1 413 aa29.22■■■□□ 2.27
RARA-202ENST00000394081 MYOM1P52179 1685 aa29.21■■■□□ 2.27
RARA-202ENST00000394081 CHMP7Q8WUX9 453 aaPredicted RBP29.2■■■□□ 2.27
RARA-202ENST00000394081 SCAF11Q99590 1463 aaKnown RBP29.19■■■□□ 2.26
RARA-202ENST00000394081 BCAR3O75815 825 aa29.19■■■□□ 2.26
RARA-202ENST00000394081 DUOX2Q9NRD8 1548 aa29.19■■■□□ 2.26
RARA-202ENST00000394081 UPF2Q9HAU5 1272 aaKnown RBP29.17■■■□□ 2.26
RARA-202ENST00000394081 SYCP2Q9BX26 1530 aa29.17■■■□□ 2.26
RARA-202ENST00000394081 SPINK5Q9NQ38 1064 aaPredicted RBP29.17■■■□□ 2.26
RARA-202ENST00000394081 APAF1O14727 1248 aa29.15■■■□□ 2.26
RARA-202ENST00000394081 PMFBP1Q8TBY8 1022 aa29.14■■■□□ 2.26
RARA-202ENST00000394081 SLC24A1O60721 1099 aa29.14■■■□□ 2.25
RARA-202ENST00000394081 SPHKAPQ2M3C7 1700 aa29.13■■■□□ 2.25
RARA-202ENST00000394081 CENPJQ9HC77 1338 aaPredicted RBP29.13■■■□□ 2.25
RARA-202ENST00000394081 TBC1D32Q96NH3 1257 aa29.13■■■□□ 2.25
RARA-202ENST00000394081 SEC24BO95487 1268 aa29.13■■■□□ 2.25
RARA-202ENST00000394081 KDM5AP29375 1690 aaKnown RBP29.12■■■□□ 2.25
RARA-202ENST00000394081 RRAGDQ9NQL2 400 aaPredicted RBP29.11■■■□□ 2.25
RARA-202ENST00000394081 TTC37Q6PGP7 1564 aa29.1■■■□□ 2.25
RARA-202ENST00000394081 FSD2A1L4K1 749 aa29.09■■■□□ 2.25
RARA-202ENST00000394081 CCDC146Q8IYE0 955 aa29.09■■■□□ 2.25
RARA-202ENST00000394081 SLKQ9H2G2 1235 aaPredicted RBP29.08■■■□□ 2.25
RARA-202ENST00000394081 KIAA1210Q9ULL0 1709 aa29.08■■■□□ 2.25
RARA-202ENST00000394081 GRWD1Q9BQ67 446 aaKnown RBP eCLIP29.08■■■□□ 2.259e-7■□□□□ 9.1
RARA-202ENST00000394081 GOLGA6L3A6NEY3 463 aa29.05■■■□□ 2.24
RARA-202ENST00000394081 ARHGAP5Q13017 1502 aa29.04■■■□□ 2.24
RARA-202ENST00000394081 TRPM2O94759 1503 aa29.04■■■□□ 2.24
RARA-202ENST00000394081 CANXP27824 592 aaKnown RBP29.04■■■□□ 2.24
RARA-202ENST00000394081 TBC1D2Q9BYX2 928 aa29.04■■■□□ 2.24
RARA-202ENST00000394081 CEP152O94986 1710 aa29.03■■■□□ 2.24
RARA-202ENST00000394081 POLR3AO14802 1390 aaPredicted RBP29.03■■■□□ 2.24
RARA-202ENST00000394081 COG6Q9Y2V7 657 aa29.02■■■□□ 2.24
RARA-202ENST00000394081 CLCN1P35523 988 aa29.01■■■□□ 2.24
RARA-202ENST00000394081 XRCC6P12956 609 aaKnown RBP eCLIP29■■■□□ 2.23
RARA-202ENST00000394081 WWC1Q8IX03 1113 aa29■■■□□ 2.23
RARA-202ENST00000394081 PANK1Q8TE04 598 aa29■■■□□ 2.23
RARA-202ENST00000394081 MCM4P33991 863 aa28.99■■■□□ 2.23
RARA-202ENST00000394081 ISY1Q9ULR0 285 aaKnown RBP28.99■■■□□ 2.23
RARA-202ENST00000394081 NEURL4Q96JN8 1562 aa28.99■■■□□ 2.23
RARA-202ENST00000394081 GLIPR1L2Q4G1C9 344 aa28.99■■■□□ 2.23
RARA-202ENST00000394081 DMRT2Q9Y5R5 561 aa28.97■■■□□ 2.23
RARA-202ENST00000394081 RWDD1Q9H446 243 aaPredicted RBP28.95■■■□□ 2.23
RARA-202ENST00000394081 PTPRTO14522 1441 aa28.95■■■□□ 2.22
RARA-202ENST00000394081 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP28.95■■■□□ 2.22
RARA-202ENST00000394081 RARSP54136 660 aaKnown RBP28.95■■■□□ 2.22
RARA-202ENST00000394081 CHMP5Q9NZZ3 219 aa28.95■■■□□ 2.22
RARA-202ENST00000394081 NCBP3Q53F19 620 aaKnown RBP28.93■■■□□ 2.22
RARA-202ENST00000394081 PNNQ9H307 717 aaKnown RBP28.93■■■□□ 2.22
RARA-202ENST00000394081 KANK1Q14678 1352 aa28.93■■■□□ 2.22
RARA-202ENST00000394081 PDZRN3Q9UPQ7 1066 aa28.92■■■□□ 2.22
RARA-202ENST00000394081 MRE11P49959 708 aa28.92■■■□□ 2.22
RARA-202ENST00000394081 PHF23Q9BUL5 403 aaPredicted RBP28.91■■■□□ 2.22
RARA-202ENST00000394081 PCDHB15Q9Y5E8 787 aa28.91■■■□□ 2.22
RARA-202ENST00000394081 WDR63Q8IWG1 891 aa28.9■■■□□ 2.22
RARA-202ENST00000394081 IQSEC2Q5JU85 1478 aa28.9■■■□□ 2.22
RARA-202ENST00000394081 ERVK-7P63135 1459 aa28.89■■■□□ 2.22
RARA-202ENST00000394081 SHPRHQ149N8 1683 aa28.89■■■□□ 2.21
RARA-202ENST00000394081 FBLN2P98095 1184 aa28.89■■■□□ 2.21
RARA-202ENST00000394081 RTEL1-TNFRSF6BF6WH68 1400 aa28.87■■■□□ 2.21
RARA-202ENST00000394081 DDX11L8A8MPP1 907 aa28.86■■■□□ 2.21
RARA-202ENST00000394081 CLTCL1P53675 1640 aa28.86■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms