RNA–Protein interactions for RNA: ENST00000394013.6

RNF41-202, Transcript of ring finger protein 41, humanhuman

TSL 1 (best) BASIC

Gene RNF41, Length 2,452 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41-202ENST00000394013 CC2D1BQ5T0F9 858 aaKnown RBP19.57■□□□□ 0.72
RNF41-202ENST00000394013 PER1O15534 1290 aaPredicted RBP19.57■□□□□ 0.72
RNF41-202ENST00000394013 CAMSAP1Q5T5Y3 1602 aa19.56■□□□□ 0.72
RNF41-202ENST00000394013 TMF1P82094 1093 aa19.56■□□□□ 0.72
RNF41-202ENST00000394013 IFT172Q9UG01 1749 aa19.54■□□□□ 0.72
RNF41-202ENST00000394013 ADGRB3O60242 1522 aa19.54■□□□□ 0.72
RNF41-202ENST00000394013 FBXO31Q5XUX0 539 aaPredicted RBP19.53■□□□□ 0.72
RNF41-202ENST00000394013 TMEM132EQ6IEE7 984 aa19.53■□□□□ 0.72
RNF41-202ENST00000394013 SCAF11Q99590 1463 aaKnown RBP19.53■□□□□ 0.72
RNF41-202ENST00000394013 SYNMO15061 1565 aa19.53■□□□□ 0.72
RNF41-202ENST00000394013 MLECQ14165 292 aa19.52■□□□□ 0.72
RNF41-202ENST00000394013 IRX6P78412 446 aaPredicted RBP19.52■□□□□ 0.72
RNF41-202ENST00000394013 IDI1Q13907 227 aa19.51■□□□□ 0.71
RNF41-202ENST00000394013 TMC1Q8TDI8 760 aa19.5■□□□□ 0.71
RNF41-202ENST00000394013 MYOM2P54296 1465 aa19.5■□□□□ 0.71
RNF41-202ENST00000394013 PNISRQ8TF01 805 aaKnown RBP19.49■□□□□ 0.71
RNF41-202ENST00000394013 TRAK1Q9UPV9 953 aa19.49■□□□□ 0.71
RNF41-202ENST00000394013 KIF13AQ9H1H9 1805 aa19.47■□□□□ 0.71
RNF41-202ENST00000394013 MYBBP1AQ9BQG0 1328 aaKnown RBP19.47■□□□□ 0.71
RNF41-202ENST00000394013 PPLO60437 1756 aa19.46■□□□□ 0.71
RNF41-202ENST00000394013 NEURL4Q96JN8 1562 aa19.46■□□□□ 0.71
RNF41-202ENST00000394013 NRXN1Q9ULB1 1477 aa19.46■□□□□ 0.71
RNF41-202ENST00000394013 KTN1Q86UP2 1357 aaKnown RBP19.45■□□□□ 0.7
RNF41-202ENST00000394013 PARD3Q8TEW0 1356 aa19.45■□□□□ 0.7
RNF41-202ENST00000394013 ZMYM4Q5VZL5 1548 aa19.44■□□□□ 0.7
RNF41-202ENST00000394013 STAC3Q96MF2 364 aa19.44■□□□□ 0.7
RNF41-202ENST00000394013 MYO5BQ9ULV0 1848 aa19.44■□□□□ 0.7
RNF41-202ENST00000394013 KIAA1210Q9ULL0 1709 aa19.43■□□□□ 0.7
RNF41-202ENST00000394013 RALBP1Q15311 655 aa19.43■□□□□ 0.7
RNF41-202ENST00000394013 PIK3C2GO75747 1445 aa19.43■□□□□ 0.7
RNF41-202ENST00000394013 ZBED9Q6R2W3 1325 aa19.42■□□□□ 0.7
RNF41-202ENST00000394013 PIK3C2BO00750 1634 aa19.42■□□□□ 0.7
RNF41-202ENST00000394013 SALL2Q9Y467 1007 aaPredicted RBP19.42■□□□□ 0.7
RNF41-202ENST00000394013 C14orf93Q9H972 538 aaKnown RBP19.41■□□□□ 0.7
RNF41-202ENST00000394013 ERVK-7P63135 1459 aa19.41■□□□□ 0.7
RNF41-202ENST00000394013 MYOM1P52179 1685 aa19.39■□□□□ 0.7
RNF41-202ENST00000394013 SAFB2Q14151 953 aaKnown RBP eCLIP19.39■□□□□ 0.69
RNF41-202ENST00000394013 EIF3AQ14152 1382 aaKnown RBP19.39■□□□□ 0.69
RNF41-202ENST00000394013 PREX1Q8TCU6 1659 aa19.39■□□□□ 0.69
RNF41-202ENST00000394013 NEXMIFQ5QGS0 1516 aa19.39■□□□□ 0.69
RNF41-202ENST00000394013 ARHGAP31Q2M1Z3 1444 aa19.38■□□□□ 0.69
RNF41-202ENST00000394013 BRD4O60885 1362 aaPredicted RBP19.38■□□□□ 0.69
RNF41-202ENST00000394013 ADGRB1O14514 1584 aa19.38■□□□□ 0.69
RNF41-202ENST00000394013 NLRP13Q86W25 1043 aa19.37■□□□□ 0.69
RNF41-202ENST00000394013 ZC3H13Q5T200 1668 aaKnown RBP19.37■□□□□ 0.69
RNF41-202ENST00000394013 NEFLP07196 543 aa19.36■□□□□ 0.69
RNF41-202ENST00000394013 AMER1Q5JTC6 1135 aaPredicted RBP19.36■□□□□ 0.69
RNF41-202ENST00000394013 STK26Q9P289 416 aa19.36■□□□□ 0.69
RNF41-202ENST00000394013 KNSTRNQ9Y448 316 aa19.35■□□□□ 0.69
RNF41-202ENST00000394013 CENPJQ9HC77 1338 aaPredicted RBP19.35■□□□□ 0.69
RNF41-202ENST00000394013 CLTCQ00610 1675 aaKnown RBP19.35■□□□□ 0.69
RNF41-202ENST00000394013 LRPPRCP42704 1394 aaKnown RBP19.35■□□□□ 0.69
RNF41-202ENST00000394013 CARD14Q9BXL6 1004 aa19.34■□□□□ 0.69
RNF41-202ENST00000394013 KDM5AP29375 1690 aaKnown RBP19.33■□□□□ 0.68
RNF41-202ENST00000394013 RPGRIP1LQ68CZ1 1315 aa19.33■□□□□ 0.68
RNF41-202ENST00000394013 SLC52A1Q9NWF4 448 aa19.32■□□□□ 0.68
RNF41-202ENST00000394013 TMEM131LA2VDJ0 1609 aa19.32■□□□□ 0.68
RNF41-202ENST00000394013 VGFO15240 615 aaPredicted RBP19.31■□□□□ 0.68
RNF41-202ENST00000394013 SETBP1Q9Y6X0 1596 aa19.3■□□□□ 0.68
RNF41-202ENST00000394013 CDCA8Q53HL2 280 aa19.3■□□□□ 0.68
RNF41-202ENST00000394013 SLC12A5Q9H2X9 1139 aa19.3■□□□□ 0.68
RNF41-202ENST00000394013 QRICH2Q9H0J4 1663 aa19.3■□□□□ 0.68
RNF41-202ENST00000394013 PPP2R1AP30153 589 aa19.29■□□□□ 0.68
RNF41-202ENST00000394013 STAG3Q9UJ98 1225 aa19.29■□□□□ 0.68
RNF41-202ENST00000394013 ASXL1Q8IXJ9 1541 aa19.28■□□□□ 0.68
RNF41-202ENST00000394013 MYO3AQ8NEV4 1616 aa19.28■□□□□ 0.68
RNF41-202ENST00000394013 ARHGEF40Q8TER5 1519 aa19.26■□□□□ 0.67
RNF41-202ENST00000394013 AGLP35573 1532 aa19.26■□□□□ 0.67
RNF41-202ENST00000394013 CABP2Q9NPB3 220 aa19.25■□□□□ 0.67
RNF41-202ENST00000394013 PLPPR3Q6T4P5 718 aa19.25■□□□□ 0.67
RNF41-202ENST00000394013 REREQ9P2R6 1566 aa19.24■□□□□ 0.67
RNF41-202ENST00000394013 ARHGEF28Q8N1W1 1705 aaKnown RBP19.24■□□□□ 0.67
RNF41-202ENST00000394013 ADAMTS8Q9UP79 889 aa19.24■□□□□ 0.67
RNF41-202ENST00000394013 TNNT2P45379 298 aaPredicted RBP19.23■□□□□ 0.67
RNF41-202ENST00000394013 CDCA7LQ96GN5 454 aa19.22■□□□□ 0.67
RNF41-202ENST00000394013 NUDCQ9Y266 331 aa19.22■□□□□ 0.67
RNF41-202ENST00000394013 SBNO2Q9Y2G9 1366 aa19.21■□□□□ 0.67
RNF41-202ENST00000394013 TULP4Q9NRJ4 1543 aa19.21■□□□□ 0.67
RNF41-202ENST00000394013 MINK1Q8N4C8 1332 aaPredicted RBP19.21■□□□□ 0.67
RNF41-202ENST00000394013 SMG6Q86US8 1419 aaKnown RBP19.21■□□□□ 0.67
RNF41-202ENST00000394013 ZMYM3Q14202 1370 aa19.2■□□□□ 0.66
RNF41-202ENST00000394013 PRAM1Q96QH2 718 aa19.19■□□□□ 0.66
RNF41-202ENST00000394013 NSD3Q9BZ95 1437 aa19.19■□□□□ 0.66
RNF41-202ENST00000394013 A2ML1A8K2U0 1454 aa19.19■□□□□ 0.66
RNF41-202ENST00000394013 CEBPAP49715 358 aaPredicted RBP19.18■□□□□ 0.66
RNF41-202ENST00000394013 ESF1Q9H501 851 aaKnown RBP19.17■□□□□ 0.66
RNF41-202ENST00000394013 SPATA31D1Q6ZQQ2 1576 aa19.17■□□□□ 0.66
RNF41-202ENST00000394013 ZFYVE9O95405 1425 aa19.17■□□□□ 0.66
RNF41-202ENST00000394013 CCDC146Q8IYE0 955 aa19.16■□□□□ 0.66
RNF41-202ENST00000394013 ALKQ9UM73 1620 aa19.16■□□□□ 0.66
RNF41-202ENST00000394013 WAPLQ7Z5K2 1190 aa19.15■□□□□ 0.66
RNF41-202ENST00000394013 PTPRMP28827 1452 aa19.15■□□□□ 0.66
RNF41-202ENST00000394013 YTHDC2Q9H6S0 1430 aaKnown RBP19.15■□□□□ 0.66
RNF41-202ENST00000394013 TRHP20396 242 aaPredicted RBP19.14■□□□□ 0.66
RNF41-202ENST00000394013 RIMS2Q9UQ26 1411 aa19.14■□□□□ 0.65
RNF41-202ENST00000394013 SRPK2P78362 688 aaKnown RBP19.14■□□□□ 0.65
RNF41-202ENST00000394013 PPP6R1Q9UPN7 881 aa19.14■□□□□ 0.65
RNF41-202ENST00000394013 BLMP54132 1417 aaPredicted RBP19.14■□□□□ 0.65
RNF41-202ENST00000394013 EVC2Q86UK5 1308 aa19.13■□□□□ 0.65
RNF41-202ENST00000394013 POGKQ9P215 609 aa19.13■□□□□ 0.65
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms