RNA–Protein interactions for RNA: ENST00000393578.7

HMGA2-203, Transcript of high mobility group AT-hook 2, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene HMGA2, Length 1,993 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGA2-203ENST00000393578 TESK2Q96S53 571 aa30.65■■■□□ 2.5
HMGA2-203ENST00000393578 ADGRF5Q8IZF2 1346 aa30.64■■■□□ 2.5
HMGA2-203ENST00000393578 PRKRIP1Q9H875 184 aaPredicted RBP30.63■■■□□ 2.49
HMGA2-203ENST00000393578 SCAF11Q99590 1463 aaKnown RBP30.63■■■□□ 2.49
HMGA2-203ENST00000393578 SLC52A1Q9NWF4 448 aa30.63■■■□□ 2.49
HMGA2-203ENST00000393578 PPLO60437 1756 aa30.62■■■□□ 2.49
HMGA2-203ENST00000393578 PREX1Q8TCU6 1659 aa30.62■■■□□ 2.49
HMGA2-203ENST00000393578 CFAP70Q5T0N1 1121 aa30.56■■■□□ 2.48
HMGA2-203ENST00000393578 TMF1P82094 1093 aa30.55■■■□□ 2.48
HMGA2-203ENST00000393578 IDI1Q13907 227 aa30.55■■■□□ 2.48
HMGA2-203ENST00000393578 EIF3AQ14152 1382 aaKnown RBP30.55■■■□□ 2.48
HMGA2-203ENST00000393578 DISP3Q9P2K9 1392 aa30.54■■■□□ 2.48
HMGA2-203ENST00000393578 SCAF1Q9H7N4 1312 aaKnown RBP30.54■■■□□ 2.48
HMGA2-203ENST00000393578 PIK3C2GO75747 1445 aa30.54■■■□□ 2.48
HMGA2-203ENST00000393578 CLTCQ00610 1675 aaKnown RBP30.53■■■□□ 2.48
HMGA2-203ENST00000393578 ERVK-7P63135 1459 aa30.52■■■□□ 2.48
HMGA2-203ENST00000393578 SETBP1Q9Y6X0 1596 aa30.51■■■□□ 2.47
HMGA2-203ENST00000393578 NEXMIFQ5QGS0 1516 aa30.5■■■□□ 2.47
HMGA2-203ENST00000393578 VGFO15240 615 aaPredicted RBP30.48■■■□□ 2.47
HMGA2-203ENST00000393578 FBXO31Q5XUX0 539 aaPredicted RBP30.48■■■□□ 2.47
HMGA2-203ENST00000393578 C14orf93Q9H972 538 aaKnown RBP30.47■■■□□ 2.47
HMGA2-203ENST00000393578 TMEM131LA2VDJ0 1609 aa30.47■■■□□ 2.47
HMGA2-203ENST00000393578 MLECQ14165 292 aa30.46■■■□□ 2.47
HMGA2-203ENST00000393578 ZFYVE9O95405 1425 aa30.44■■■□□ 2.46
HMGA2-203ENST00000393578 SLC24A1O60721 1099 aa30.43■■■□□ 2.46
HMGA2-203ENST00000393578 SPATA31D1Q6ZQQ2 1576 aa30.43■■■□□ 2.46
HMGA2-203ENST00000393578 CDCA8Q53HL2 280 aa30.42■■■□□ 2.46
HMGA2-203ENST00000393578 ADGRB1O14514 1584 aa30.39■■■□□ 2.46
HMGA2-203ENST00000393578 MYO5BQ9ULV0 1848 aa30.39■■■□□ 2.46
HMGA2-203ENST00000393578 KTN1Q86UP2 1357 aaKnown RBP30.39■■■□□ 2.46
HMGA2-203ENST00000393578 TRHP20396 242 aaPredicted RBP30.39■■■□□ 2.46
HMGA2-203ENST00000393578 ESF1Q9H501 851 aaKnown RBP30.39■■■□□ 2.46
HMGA2-203ENST00000393578 GTF3C3Q9Y5Q9 886 aa30.39■■■□□ 2.46
HMGA2-203ENST00000393578 MYO3AQ8NEV4 1616 aa30.38■■■□□ 2.45
HMGA2-203ENST00000393578 CCDC184Q52MB2 194 aa30.37■■■□□ 2.45
HMGA2-203ENST00000393578 MRS2Q9HD23 443 aa30.36■■■□□ 2.45
HMGA2-203ENST00000393578 PER1O15534 1290 aaPredicted RBP30.34■■■□□ 2.45
HMGA2-203ENST00000393578 ZMYM3Q14202 1370 aa30.34■■■□□ 2.45
HMGA2-203ENST00000393578 SBNO2Q9Y2G9 1366 aa30.34■■■□□ 2.45
HMGA2-203ENST00000393578 DNAJC5Q9H3Z4 198 aa30.33■■■□□ 2.45
HMGA2-203ENST00000393578 NUTM2DQ5VT03 806 aaPredicted RBP30.32■■■□□ 2.44
HMGA2-203ENST00000393578 RALBP1Q15311 655 aa30.31■■■□□ 2.44
HMGA2-203ENST00000393578 PANK3Q9H999 370 aa30.3■■■□□ 2.44
HMGA2-203ENST00000393578 STAG3Q9UJ98 1225 aa30.3■■■□□ 2.44
HMGA2-203ENST00000393578 CENPJQ9HC77 1338 aaPredicted RBP30.28■■■□□ 2.44
HMGA2-203ENST00000393578 CNGB1Q14028 1251 aaPredicted RBP30.28■■■□□ 2.44
HMGA2-203ENST00000393578 TMEM132EQ6IEE7 984 aa30.28■■■□□ 2.44
HMGA2-203ENST00000393578 KDM5AP29375 1690 aaKnown RBP30.27■■■□□ 2.44
HMGA2-203ENST00000393578 TRAK1Q9UPV9 953 aa30.26■■■□□ 2.44
HMGA2-203ENST00000393578 A2ML1A8K2U0 1454 aa30.26■■■□□ 2.44
HMGA2-203ENST00000393578 PARD3Q8TEW0 1356 aa30.23■■■□□ 2.43
HMGA2-203ENST00000393578 MYBBP1AQ9BQG0 1328 aaKnown RBP30.23■■■□□ 2.43
HMGA2-203ENST00000393578 MYOM1P52179 1685 aa30.21■■■□□ 2.43
HMGA2-203ENST00000393578 QRICH2Q9H0J4 1663 aa30.21■■■□□ 2.43
HMGA2-203ENST00000393578 HNRNPUQ00839 825 aaKnown RBP eCLIP30.2■■■□□ 2.43
HMGA2-203ENST00000393578 FAM9BQ8IZU0 186 aa30.2■■■□□ 2.43
HMGA2-203ENST00000393578 BRD4O60885 1362 aaPredicted RBP30.18■■■□□ 2.42
HMGA2-203ENST00000393578 ARHGEF28Q8N1W1 1705 aaKnown RBP30.17■■■□□ 2.42
HMGA2-203ENST00000393578 TNRQ92752 1358 aa30.17■■■□□ 2.42
HMGA2-203ENST00000393578 ASXL1Q8IXJ9 1541 aa30.16■■■□□ 2.42
HMGA2-203ENST00000393578 RIMS2Q9UQ26 1411 aa30.16■■■□□ 2.42
HMGA2-203ENST00000393578 TMC1Q8TDI8 760 aa30.15■■■□□ 2.42
HMGA2-203ENST00000393578 KNSTRNQ9Y448 316 aa30.14■■■□□ 2.41
HMGA2-203ENST00000393578 ALKQ9UM73 1620 aa30.13■■■□□ 2.41
HMGA2-203ENST00000393578 NLRP13Q86W25 1043 aa30.11■■■□□ 2.41
HMGA2-203ENST00000393578 CC2D1BQ5T0F9 858 aaKnown RBP30.1■■■□□ 2.41
HMGA2-203ENST00000393578 ABCF1Q8NE71 845 aaKnown RBP eCLIP30.1■■■□□ 2.41
HMGA2-203ENST00000393578 PNISRQ8TF01 805 aaKnown RBP30.09■■■□□ 2.41
HMGA2-203ENST00000393578 YTHDC2Q9H6S0 1430 aaKnown RBP30.08■■■□□ 2.41
HMGA2-203ENST00000393578 FER1L4A9Z1Z3 1794 aa30.07■■■□□ 2.4
HMGA2-203ENST00000393578 PUS7Q96PZ0 661 aaKnown RBP30.07■■■□□ 2.4
HMGA2-203ENST00000393578 AMER1Q5JTC6 1135 aaPredicted RBP30.06■■■□□ 2.4
HMGA2-203ENST00000393578 NPC1L1Q9UHC9 1359 aa30.06■■■□□ 2.4
HMGA2-203ENST00000393578 HDGFP51858 240 aaKnown RBP30.04■■■□□ 2.4
HMGA2-203ENST00000393578 PTPRMP28827 1452 aa30.04■■■□□ 2.4
HMGA2-203ENST00000393578 SENP3Q9H4L4 574 aaPredicted RBP30.04■■■□□ 2.4
HMGA2-203ENST00000393578 STK26Q9P289 416 aa30.04■■■□□ 2.4
HMGA2-203ENST00000393578 EVC2Q86UK5 1308 aa30.04■■■□□ 2.4
HMGA2-203ENST00000393578 C3P01024 1663 aa30.03■■■□□ 2.4
HMGA2-203ENST00000393578 NLRP1Q9C000 1473 aa30.03■■■□□ 2.4
HMGA2-203ENST00000393578 UBR1Q8IWV7 1749 aa30.03■■■□□ 2.4
HMGA2-203ENST00000393578 ZBED9Q6R2W3 1325 aa30■■■□□ 2.39
HMGA2-203ENST00000393578 TULP4Q9NRJ4 1543 aa30■■■□□ 2.39
HMGA2-203ENST00000393578 LRPPRCP42704 1394 aaKnown RBP30■■■□□ 2.39
HMGA2-203ENST00000393578 SETD1AO15047 1707 aaKnown RBP30■■■□□ 2.39
HMGA2-203ENST00000393578 TMEM2Q9UHN6 1383 aa29.98■■■□□ 2.39
HMGA2-203ENST00000393578 CEBPAP49715 358 aaPredicted RBP29.97■■■□□ 2.39
HMGA2-203ENST00000393578 NRXN3Q9Y4C0 1643 aa29.97■■■□□ 2.39
HMGA2-203ENST00000393578 PRAM1Q96QH2 718 aa29.95■■■□□ 2.39
HMGA2-203ENST00000393578 CARD14Q9BXL6 1004 aa29.95■■■□□ 2.39
HMGA2-203ENST00000393578 DLC1Q96QB1 1528 aa29.95■■■□□ 2.39
HMGA2-203ENST00000393578 POGKQ9P215 609 aa29.94■■■□□ 2.38
HMGA2-203ENST00000393578 SAFB2Q14151 953 aaKnown RBP eCLIP29.93■■■□□ 2.38
HMGA2-203ENST00000393578 SLC12A5Q9H2X9 1139 aa29.91■■■□□ 2.38
HMGA2-203ENST00000393578 ABCC11Q96J66 1382 aa29.91■■■□□ 2.38
HMGA2-203ENST00000393578 PPP2R1AP30153 589 aa29.89■■■□□ 2.38
HMGA2-203ENST00000393578 NINLQ9Y2I6 1382 aa29.87■■■□□ 2.37
HMGA2-203ENST00000393578 CABP2Q9NPB3 220 aa29.86■■■□□ 2.37
HMGA2-203ENST00000393578 MINK1Q8N4C8 1332 aaPredicted RBP29.86■■■□□ 2.37
HMGA2-203ENST00000393578 INSRP06213 1382 aa29.85■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 10.7 ms