RNA–Protein interactions for RNA: ENST00000393077.2

VTI1A-201, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

APPRIS P1 TSL 2 BASIC

Gene VTI1A, Length 4,131 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-201ENST00000393077 PDE3BQ13370 1112 aa9.47□□□□□ -0.89
VTI1A-201ENST00000393077 CCDC39Q9UFE4 941 aa9.47□□□□□ -0.89
VTI1A-201ENST00000393077 HDAC5Q9UQL6 1122 aa9.47□□□□□ -0.89
VTI1A-201ENST00000393077 TRERF1Q96PN7 1200 aa9.46□□□□□ -0.89
VTI1A-201ENST00000393077 GOLGA6L1Q8N7Z2 621 aa9.46□□□□□ -0.89
VTI1A-201ENST00000393077 L3MBTL2Q969R5 705 aa9.46□□□□□ -0.89
VTI1A-201ENST00000393077 CALCOCO1Q9P1Z2 691 aa9.46□□□□□ -0.89
VTI1A-201ENST00000393077 NBPF1Q3BBV0 1214 aa9.46□□□□□ -0.9
VTI1A-201ENST00000393077 ZNF830Q96NB3 372 aaPredicted RBP9.46□□□□□ -0.9
VTI1A-201ENST00000393077 MYOM3Q5VTT5 1437 aa9.46□□□□□ -0.9
VTI1A-201ENST00000393077 ERICH4A6NGS2 130 aa9.46□□□□□ -0.9
VTI1A-201ENST00000393077 NCOA2Q15596 1464 aa9.45□□□□□ -0.9
VTI1A-201ENST00000393077 TRIM6-TRIM34B2RNG4 842 aa9.45□□□□□ -0.9
VTI1A-201ENST00000393077 TRIM34Q9BYJ4 488 aa9.45□□□□□ -0.9
VTI1A-201ENST00000393077 ANKRD30AQ9BXX3 1397 aa9.45□□□□□ -0.9
VTI1A-201ENST00000393077 FYCO1Q9BQS8 1478 aa9.45□□□□□ -0.9
VTI1A-201ENST00000393077 RRBP1Q9P2E9 1410 aaKnown RBP9.45□□□□□ -0.9
VTI1A-201ENST00000393077 FAM193AP78312 1265 aa9.45□□□□□ -0.9
VTI1A-201ENST00000393077 DIAPH3Q9NSV4 1193 aa9.45□□□□□ -0.9
VTI1A-201ENST00000393077 MFAP1P55081 439 aaKnown RBP9.44□□□□□ -0.9
VTI1A-201ENST00000393077 BCCIPQ9P287 314 aaKnown RBP eCLIP9.44□□□□□ -0.9
VTI1A-201ENST00000393077 TULP1O00294 542 aaPredicted RBP9.44□□□□□ -0.9
VTI1A-201ENST00000393077 KCNA4P22459 653 aa9.44□□□□□ -0.9
VTI1A-201ENST00000393077 FOXD4L1Q9NU39 408 aa9.43□□□□□ -0.9
VTI1A-201ENST00000393077 GGT6Q6P531 493 aa9.43□□□□□ -0.9
VTI1A-201ENST00000393077 MAPK8IP3Q9UPT6 1336 aa9.43□□□□□ -0.9
VTI1A-201ENST00000393077 WDR97A6NE52 1622 aa9.42□□□□□ -0.9
VTI1A-201ENST00000393077 CNPY4Q8N129 248 aa9.42□□□□□ -0.9
VTI1A-201ENST00000393077 PRG4Q92954 1404 aaPredicted RBP9.42□□□□□ -0.9
VTI1A-201ENST00000393077 PRDM2Q13029 1718 aa9.42□□□□□ -0.9
VTI1A-201ENST00000393077 EFCAB5A4FU69 1503 aa9.42□□□□□ -0.9
VTI1A-201ENST00000393077 TIAM1Q13009 1591 aa9.42□□□□□ -0.9
VTI1A-201ENST00000393077 AXDND1Q5T1B0 1012 aaPredicted RBP9.41□□□□□ -0.9
VTI1A-201ENST00000393077 OSCARQ8IYS5 282 aa9.41□□□□□ -0.9
VTI1A-201ENST00000393077 HSP90B1P14625 803 aaKnown RBP9.41□□□□□ -0.9
VTI1A-201ENST00000393077 TMEM51Q9NW97 253 aa9.41□□□□□ -0.9
VTI1A-201ENST00000393077 RIPK4P57078 832 aa9.41□□□□□ -0.9
VTI1A-201ENST00000393077 CYB5RLQ6IPT4 315 aa9.41□□□□□ -0.9
VTI1A-201ENST00000393077 TPRNQ4KMQ1 711 aa9.4□□□□□ -0.9
VTI1A-201ENST00000393077 GPATCH11Q8N954 259 aa9.4□□□□□ -0.9
VTI1A-201ENST00000393077 KIF3BO15066 747 aa9.4□□□□□ -0.9
VTI1A-201ENST00000393077 GTF2A1P52655 376 aaPredicted RBP9.4□□□□□ -0.9
VTI1A-201ENST00000393077 CALRP27797 417 aaKnown RBP9.39□□□□□ -0.91
VTI1A-201ENST00000393077 CNTLNQ9NXG0 1405 aa9.39□□□□□ -0.91
VTI1A-201ENST00000393077 KIAA0586Q9BVV6 1533 aa9.39□□□□□ -0.91
VTI1A-201ENST00000393077 TEX35Q5T0J7 233 aa9.39□□□□□ -0.91
VTI1A-201ENST00000393077 SPAG9O60271 1321 aaKnown RBP9.39□□□□□ -0.91
VTI1A-201ENST00000393077 FSD2A1L4K1 749 aa9.39□□□□□ -0.91
VTI1A-201ENST00000393077 CDK13Q14004 1512 aaKnown RBP9.39□□□□□ -0.91
VTI1A-201ENST00000393077 LMOD3Q0VAK6 560 aa9.38□□□□□ -0.91
VTI1A-201ENST00000393077 MLECQ14165 292 aa9.38□□□□□ -0.91
VTI1A-201ENST00000393077 PCF11O94913 1555 aaKnown RBP9.38□□□□□ -0.91
VTI1A-201ENST00000393077 MCM5P33992 734 aa9.38□□□□□ -0.91
VTI1A-201ENST00000393077 ERBB4Q15303 1308 aa9.38□□□□□ -0.91
VTI1A-201ENST00000393077 ZBTB22O15209 634 aa9.38□□□□□ -0.91
VTI1A-201ENST00000393077 NOM1Q5C9Z4 860 aaKnown RBP9.38□□□□□ -0.91
VTI1A-201ENST00000393077 CAVIN1Q6NZI2 390 aaKnown RBP9.37□□□□□ -0.91
VTI1A-201ENST00000393077 PRIMPOLQ96LW4 560 aa9.37□□□□□ -0.91
VTI1A-201ENST00000393077 RNF214Q8ND24 703 aa9.37□□□□□ -0.91
VTI1A-201ENST00000393077 SYAP1Q96A49 352 aaPredicted RBP9.37□□□□□ -0.91
VTI1A-201ENST00000393077 HTATSF1O43719 755 aaKnown RBP9.37□□□□□ -0.91
VTI1A-201ENST00000393077 GPS2Q13227 327 aa9.37□□□□□ -0.91
VTI1A-201ENST00000393077 ZNF622Q969S3 477 aaKnown RBP eCLIP9.36□□□□□ -0.91
VTI1A-201ENST00000393077 DEF6Q9H4E7 631 aa9.36□□□□□ -0.91
VTI1A-201ENST00000393077 DRC7Q8IY82 874 aa9.36□□□□□ -0.91
VTI1A-201ENST00000393077 TBC1D2Q9BYX2 928 aa9.36□□□□□ -0.91
VTI1A-201ENST00000393077 IQGAP2Q13576 1575 aa9.36□□□□□ -0.91
VTI1A-201ENST00000393077 CUL7Q14999 1698 aa9.36□□□□□ -0.91
VTI1A-201ENST00000393077 GRIN2AQ12879 1464 aa9.36□□□□□ -0.91
VTI1A-201ENST00000393077 ZSCAN20P17040 1043 aaPredicted RBP9.36□□□□□ -0.91
VTI1A-201ENST00000393077 ZKSCAN5Q9Y2L8 839 aa9.36□□□□□ -0.91
VTI1A-201ENST00000393077 PLB1Q6P1J6 1458 aa9.35□□□□□ -0.91
VTI1A-201ENST00000393077 C22orf23Q9BZE7 217 aa9.35□□□□□ -0.91
VTI1A-201ENST00000393077 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP9.35□□□□□ -0.91
VTI1A-201ENST00000393077 RALBP1Q15311 655 aa9.35□□□□□ -0.91
VTI1A-201ENST00000393077 HS1BP3Q53T59 392 aa9.35□□□□□ -0.91
VTI1A-201ENST00000393077 MPNDQ8N594 471 aa9.35□□□□□ -0.91
VTI1A-201ENST00000393077 BANK1Q8NDB2 785 aa9.35□□□□□ -0.91
VTI1A-201ENST00000393077 CWC15Q9P013 229 aaKnown RBP9.35□□□□□ -0.91
VTI1A-201ENST00000393077 EPRSP07814 1512 aaKnown RBP9.35□□□□□ -0.91
VTI1A-201ENST00000393077 TNNT1P13805 278 aa9.35□□□□□ -0.91
VTI1A-201ENST00000393077 C8orf34Q49A92 452 aa9.34□□□□□ -0.91
VTI1A-201ENST00000393077 AFAP1Q8N556 730 aa9.34□□□□□ -0.91
VTI1A-201ENST00000393077 SYNJ2O15056 1496 aa9.34□□□□□ -0.91
VTI1A-201ENST00000393077 UACAQ9BZF9 1416 aa9.34□□□□□ -0.91
VTI1A-201ENST00000393077 KANK1Q14678 1352 aa9.33□□□□□ -0.92
VTI1A-201ENST00000393077 MCTP1Q6DN14 999 aa9.33□□□□□ -0.92
VTI1A-201ENST00000393077 NOL7Q9UMY1 257 aaKnown RBP9.33□□□□□ -0.92
VTI1A-201ENST00000393077 PMFBP1Q8TBY8 1022 aa9.33□□□□□ -0.92
VTI1A-201ENST00000393077 KIF15Q9NS87 1388 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 TROQ12816 1431 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-201ENST00000393077 RGS22Q8NE09 1264 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 ZBTB9Q96C00 473 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 FEZ1Q99689 392 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 TOMM22Q9NS69 142 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 CCDC7Q96M83 1385 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 ZNF592Q92610 1267 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 CDCA7LQ96GN5 454 aa9.32□□□□□ -0.92
VTI1A-201ENST00000393077 RWDD1Q9H446 243 aaPredicted RBP9.32□□□□□ -0.92
VTI1A-201ENST00000393077 FAM177BA6PVY3 158 aa9.31□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.8 ms