RNA–Protein interactions for RNA: ENST00000392811.6

SMARCD3-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily d, member 3, humanhuman

TSL 1 (best) BASIC

Gene SMARCD3, Length 2,018 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCD3-203ENST00000392811 RICTORQ6R327 1708 aa34.69■■■■□ 3.14
SMARCD3-203ENST00000392811 LRPPRCP42704 1394 aaKnown RBP34.69■■■■□ 3.14
SMARCD3-203ENST00000392811 ADGRB3O60242 1522 aa34.69■■■■□ 3.14
SMARCD3-203ENST00000392811 ADGRF5Q8IZF2 1346 aa34.69■■■■□ 3.14
SMARCD3-203ENST00000392811 NLRP13Q86W25 1043 aa34.66■■■■□ 3.14
SMARCD3-203ENST00000392811 EIF3AQ14152 1382 aaKnown RBP34.65■■■■□ 3.14
SMARCD3-203ENST00000392811 CFAP70Q5T0N1 1121 aa34.65■■■■□ 3.14
SMARCD3-203ENST00000392811 GLI2P10070 1586 aa34.64■■■■□ 3.14
SMARCD3-203ENST00000392811 CFAP65Q6ZU64 1925 aaKnown RBP34.64■■■■□ 3.14
SMARCD3-203ENST00000392811 NRXN1Q9ULB1 1477 aa34.64■■■■□ 3.14
SMARCD3-203ENST00000392811 CAMSAP1Q5T5Y3 1602 aa34.63■■■■□ 3.13
SMARCD3-203ENST00000392811 RIMBP3CA6NJZ7 1639 aa34.62■■■■□ 3.13
SMARCD3-203ENST00000392811 RIMBP3BA6NNM3 1639 aa34.62■■■■□ 3.13
SMARCD3-203ENST00000392811 RIMBP3Q9UFD9 1639 aa34.62■■■■□ 3.13
SMARCD3-203ENST00000392811 IRX6P78412 446 aaPredicted RBP34.62■■■■□ 3.13
SMARCD3-203ENST00000392811 CC2D1BQ5T0F9 858 aaKnown RBP34.61■■■■□ 3.13
SMARCD3-203ENST00000392811 CDCA8Q53HL2 280 aa34.6■■■■□ 3.13
SMARCD3-203ENST00000392811 SMG6Q86US8 1419 aaKnown RBP34.6■■■■□ 3.13
SMARCD3-203ENST00000392811 CHGAP10645 457 aaKnown RBP34.59■■■■□ 3.13
SMARCD3-203ENST00000392811 NOS1P29475 1434 aa34.58■■■■□ 3.13
SMARCD3-203ENST00000392811 SYNMO15061 1565 aa34.57■■■■□ 3.13
SMARCD3-203ENST00000392811 PPLO60437 1756 aa34.55■■■■□ 3.12
SMARCD3-203ENST00000392811 SIGLEC1Q9BZZ2 1709 aa34.55■■■■□ 3.12
SMARCD3-203ENST00000392811 YEATS2Q9ULM3 1422 aa34.54■■■■□ 3.12
SMARCD3-203ENST00000392811 TSHZ2Q9NRE2 1034 aa34.52■■■■□ 3.12
SMARCD3-203ENST00000392811 MYOM1P52179 1685 aa34.52■■■■□ 3.12
SMARCD3-203ENST00000392811 SENP3-EIF4A1A0A087X0R7 540 aa34.51■■■■□ 3.12
SMARCD3-203ENST00000392811 NUDCQ9Y266 331 aa34.5■■■■□ 3.11
SMARCD3-203ENST00000392811 KDM5AP29375 1690 aaKnown RBP34.5■■■■□ 3.11
SMARCD3-203ENST00000392811 ERICH6BQ5W0A0 696 aa34.5■■■■□ 3.11
SMARCD3-203ENST00000392811 SETBP1Q9Y6X0 1596 aa34.48■■■■□ 3.11
SMARCD3-203ENST00000392811 ZC3H13Q5T200 1668 aaKnown RBP34.48■■■■□ 3.11
SMARCD3-203ENST00000392811 PIK3C2BO00750 1634 aa34.47■■■■□ 3.11
SMARCD3-203ENST00000392811 DIP2BQ9P265 1576 aa34.47■■■■□ 3.11
SMARCD3-203ENST00000392811 PIK3C2GO75747 1445 aa34.47■■■■□ 3.11
SMARCD3-203ENST00000392811 KNSTRNQ9Y448 316 aa34.47■■■■□ 3.11
SMARCD3-203ENST00000392811 MYO3AQ8NEV4 1616 aa34.46■■■■□ 3.11
SMARCD3-203ENST00000392811 FAM69CQ0P6D2 419 aa34.45■■■■□ 3.11
SMARCD3-203ENST00000392811 ERVK-7P63135 1459 aa34.45■■■■□ 3.11
SMARCD3-203ENST00000392811 RPGRIP1LQ68CZ1 1315 aa34.45■■■■□ 3.11
SMARCD3-203ENST00000392811 ARHGAP31Q2M1Z3 1444 aa34.45■■■■□ 3.11
SMARCD3-203ENST00000392811 SLC24A1O60721 1099 aa34.44■■■■□ 3.1
SMARCD3-203ENST00000392811 ZMYM4Q5VZL5 1548 aa34.42■■■■□ 3.1
SMARCD3-203ENST00000392811 AMER1Q5JTC6 1135 aaPredicted RBP34.41■■■■□ 3.1
SMARCD3-203ENST00000392811 C14orf93Q9H972 538 aaKnown RBP34.4■■■■□ 3.1
SMARCD3-203ENST00000392811 ASXL1Q8IXJ9 1541 aa34.39■■■■□ 3.1
SMARCD3-203ENST00000392811 SBNO2Q9Y2G9 1366 aa34.37■■■■□ 3.09
SMARCD3-203ENST00000392811 ADGRB1O14514 1584 aa34.37■■■■□ 3.09
SMARCD3-203ENST00000392811 PPP4R2Q9NY27 417 aa34.35■■■■□ 3.09
SMARCD3-203ENST00000392811 INSRP06213 1382 aa34.35■■■■□ 3.09
SMARCD3-203ENST00000392811 TSPOAP1O95153 1857 aa34.34■■■■□ 3.09
SMARCD3-203ENST00000392811 CENPJQ9HC77 1338 aaPredicted RBP34.33■■■■□ 3.09
SMARCD3-203ENST00000392811 NEXMIFQ5QGS0 1516 aa34.33■■■■□ 3.09
SMARCD3-203ENST00000392811 BLMP54132 1417 aaPredicted RBP34.32■■■■□ 3.08
SMARCD3-203ENST00000392811 PPP2R1AP30153 589 aa34.31■■■■□ 3.08
SMARCD3-203ENST00000392811 NPC1L1Q9UHC9 1359 aa34.31■■■■□ 3.08
SMARCD3-203ENST00000392811 RNF123Q5XPI4 1314 aa34.31■■■■□ 3.08
SMARCD3-203ENST00000392811 TRAK1Q9UPV9 953 aa34.3■■■■□ 3.08
SMARCD3-203ENST00000392811 IDI1Q13907 227 aa34.29■■■■□ 3.08
SMARCD3-203ENST00000392811 TMEM132EQ6IEE7 984 aa34.28■■■■□ 3.08
SMARCD3-203ENST00000392811 PREX1Q8TCU6 1659 aa34.28■■■■□ 3.08
SMARCD3-203ENST00000392811 QRICH2Q9H0J4 1663 aa34.27■■■■□ 3.08
SMARCD3-203ENST00000392811 VGFO15240 615 aaPredicted RBP34.26■■■■□ 3.08
SMARCD3-203ENST00000392811 NUTM2DQ5VT03 806 aaPredicted RBP34.25■■■■□ 3.07
SMARCD3-203ENST00000392811 SLC52A1Q9NWF4 448 aa34.25■■■■□ 3.07
SMARCD3-203ENST00000392811 SALL2Q9Y467 1007 aaPredicted RBP34.25■■■■□ 3.07
SMARCD3-203ENST00000392811 PDE3BQ13370 1112 aa34.21■■■■□ 3.07
SMARCD3-203ENST00000392811 CARD14Q9BXL6 1004 aa34.2■■■■□ 3.07
SMARCD3-203ENST00000392811 MYO5BQ9ULV0 1848 aa34.19■■■■□ 3.06
SMARCD3-203ENST00000392811 REREQ9P2R6 1566 aa34.19■■■■□ 3.06
SMARCD3-203ENST00000392811 ADAMTS8Q9UP79 889 aa34.18■■■■□ 3.06
SMARCD3-203ENST00000392811 TMEM131LA2VDJ0 1609 aa34.18■■■■□ 3.06
SMARCD3-203ENST00000392811 ZFYVE9O95405 1425 aa34.17■■■■□ 3.06
SMARCD3-203ENST00000392811 ARHGEF28Q8N1W1 1705 aaKnown RBP34.14■■■■□ 3.06
SMARCD3-203ENST00000392811 AGLP35573 1532 aa34.14■■■■□ 3.06
SMARCD3-203ENST00000392811 B4GALNT3Q6L9W6 998 aa34.13■■■■□ 3.05
SMARCD3-203ENST00000392811 WDR43Q15061 677 aaKnown RBP eCLIP34.12■■■■□ 3.05
SMARCD3-203ENST00000392811 FBXO31Q5XUX0 539 aaPredicted RBP34.12■■■■□ 3.05
SMARCD3-203ENST00000392811 CDCA7LQ96GN5 454 aa34.09■■■■□ 3.05
SMARCD3-203ENST00000392811 SLC12A5Q9H2X9 1139 aa34.05■■■■□ 3.04
SMARCD3-203ENST00000392811 RCAN3Q9UKA8 241 aa34.05■■■■□ 3.04
SMARCD3-203ENST00000392811 PPP6R1Q9UPN7 881 aa34.05■■■■□ 3.04
SMARCD3-203ENST00000392811 CLTCQ00610 1675 aaKnown RBP34.04■■■■□ 3.04
SMARCD3-203ENST00000392811 NSD3Q9BZ95 1437 aa34.04■■■■□ 3.04
SMARCD3-203ENST00000392811 KIF13AQ9H1H9 1805 aa34.03■■■■□ 3.04
SMARCD3-203ENST00000392811 TULP4Q9NRJ4 1543 aa34.03■■■■□ 3.04
SMARCD3-203ENST00000392811 EVC2Q86UK5 1308 aa34.01■■■■□ 3.03
SMARCD3-203ENST00000392811 RRP1P56182 461 aaKnown RBP34.01■■■■□ 3.03
SMARCD3-203ENST00000392811 PUS7Q96PZ0 661 aaKnown RBP33.99■■■■□ 3.03
SMARCD3-203ENST00000392811 SENP3Q9H4L4 574 aaPredicted RBP33.99■■■■□ 3.03
SMARCD3-203ENST00000392811 RBM19Q9Y4C8 960 aaKnown RBP33.98■■■■□ 3.03
SMARCD3-203ENST00000392811 ARHGEF40Q8TER5 1519 aa33.96■■■■□ 3.03
SMARCD3-203ENST00000392811 PLEKHH1Q9ULM0 1364 aa33.95■■■■□ 3.03
SMARCD3-203ENST00000392811 STK26Q9P289 416 aa33.95■■■■□ 3.03
SMARCD3-203ENST00000392811 USP32Q8NFA0 1604 aa33.95■■■■□ 3.03
SMARCD3-203ENST00000392811 SPATA31D1Q6ZQQ2 1576 aa33.93■■■■□ 3.02
SMARCD3-203ENST00000392811 STAG3Q9UJ98 1225 aa33.92■■■■□ 3.02
SMARCD3-203ENST00000392811 SAFB2Q14151 953 aaKnown RBP eCLIP33.92■■■■□ 3.02
SMARCD3-203ENST00000392811 MLECQ14165 292 aa33.92■■■■□ 3.02
SMARCD3-203ENST00000392811 PTPRMP28827 1452 aa33.91■■■■□ 3.02
Retrieved 100 of 20,778 RNA–protein pairs in 52.6 ms